Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_L07
         (876 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q00S21 Cluster: Chromosome 19 contig 1, DNA sequence; n...    34   5.5  
UniRef50_A2TIR8 Cluster: Receptor for egg jelly protein 9; n=9; ...    34   5.5  

>UniRef50_Q00S21 Cluster: Chromosome 19 contig 1, DNA sequence; n=1;
           Ostreococcus tauri|Rep: Chromosome 19 contig 1, DNA
           sequence - Ostreococcus tauri
          Length = 2065

 Score = 33.9 bits (74), Expect = 5.5
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
 Frame = +2

Query: 272 WDYRNNQIKTRNTCG*CGVRNCTLIEALVNGEAAATNKIQTIIVITSITYCSMCLA-TSX 448
           + Y N Q+        C  ++  LIE +V+   +A N++ + +   SITYCS C   TS 
Sbjct: 378 YTYSNAQLFNLTIKAPCAAKSSGLIETVVS---SAINRVSSSVNYDSITYCSRCTCPTSS 434

Query: 449 TQHSMNNV 472
           T  S  ++
Sbjct: 435 TTCSFRDM 442


>UniRef50_A2TIR8 Cluster: Receptor for egg jelly protein 9; n=9;
            cellular organisms|Rep: Receptor for egg jelly protein 9
            - Strongylocentrotus purpuratus (Purple sea urchin)
          Length = 2965

 Score = 33.9 bits (74), Expect = 5.5
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +2

Query: 503  PDGVAGGLRPLQSVRCILRGVSTATTAPSSLGEHVIYH 616
            P G+ GG+  + +V     G ST+  APS+ G H  YH
Sbjct: 2927 PGGMGGGMPGVDNVMPSYGGASTSPRAPSATGSHSSYH 2964


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 632,666,915
Number of Sequences: 1657284
Number of extensions: 10988820
Number of successful extensions: 28307
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 27440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28300
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78292544701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)