Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_L07
         (876 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical pr...    29   5.8  
Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical pr...    29   5.8  
Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical pr...    29   5.8  
AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding c...    29   5.8  
Z74475-2|CAA98958.4|  385|Caenorhabditis elegans Hypothetical pr...    28   7.6  
U00048-1|AAB53825.2|  425|Caenorhabditis elegans Lethal protein ...    28   7.6  
AJ010553-1|CAA09234.1|  425|Caenorhabditis elegans LET-756 prote...    28   7.6  

>Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical
           protein C48B4.4c protein.
          Length = 1704

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = -3

Query: 304 PRFYLVVSIVPHTSKPEEVDDVFELTLFSLSVRRLVLKSKFXRVV 170
           P  YLVV    HTS PE + D F++     +V  + L+S F + +
Sbjct: 38  PLVYLVVKNADHTSSPENIYDNFQV---KGTVEDVFLESNFIKPI 79


>Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical
           protein C48B4.4b protein.
          Length = 1691

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = -3

Query: 304 PRFYLVVSIVPHTSKPEEVDDVFELTLFSLSVRRLVLKSKFXRVV 170
           P  YLVV    HTS PE + D F++     +V  + L+S F + +
Sbjct: 38  PLVYLVVKNADHTSSPENIYDNFQV---KGTVEDVFLESNFIKPI 79


>Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical
           protein C48B4.4a protein.
          Length = 1689

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = -3

Query: 304 PRFYLVVSIVPHTSKPEEVDDVFELTLFSLSVRRLVLKSKFXRVV 170
           P  YLVV    HTS PE + D F++     +V  + L+S F + +
Sbjct: 38  PLVYLVVKNADHTSSPENIYDNFQV---KGTVEDVFLESNFIKPI 79


>AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding
           cassette transporter protein.
          Length = 1704

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = -3

Query: 304 PRFYLVVSIVPHTSKPEEVDDVFELTLFSLSVRRLVLKSKFXRVV 170
           P  YLVV    HTS PE + D F++     +V  + L+S F + +
Sbjct: 38  PLVYLVVKNADHTSSPENIYDNFQV---KGTVEDVFLESNFIKPI 79


>Z74475-2|CAA98958.4|  385|Caenorhabditis elegans Hypothetical
           protein R04F11.3 protein.
          Length = 385

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -2

Query: 557 EEYSERTEEDADPQPRHQEPRGQKRYLFE 471
           E+ +E+TE+   P P+ QE + +KR + E
Sbjct: 189 EKKTEKTEKSQSPVPQDQEKKNRKRPMIE 217


>U00048-1|AAB53825.2|  425|Caenorhabditis elegans Lethal protein 756
           protein.
          Length = 425

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -2

Query: 563 HHEEYSERTEEDADPQPRHQEPRGQKRYLFEHCS 462
           HH  +  R    +DPQ RHQ    Q+ YL +  S
Sbjct: 382 HHHHHHPRVSSSSDPQQRHQ---SQQHYLAQTVS 412


>AJ010553-1|CAA09234.1|  425|Caenorhabditis elegans LET-756 protein
           protein.
          Length = 425

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -2

Query: 563 HHEEYSERTEEDADPQPRHQEPRGQKRYLFEHCS 462
           HH  +  R    +DPQ RHQ    Q+ YL +  S
Sbjct: 382 HHHHHHPRVSSSSDPQQRHQ---SQQHYLAQTVS 412


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,961,056
Number of Sequences: 27780
Number of extensions: 281103
Number of successful extensions: 808
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)