Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_L06
         (1301 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    33   0.65 

>08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,
            3308247-3308315,3308427-3308513,3308753-3308858,
            3309118-3309237,3309327-3309406,3309497-3309878,
            3310746-3310814,3311460-3312202
          Length = 644

 Score = 32.7 bits (71), Expect = 0.65
 Identities = 16/51 (31%), Positives = 17/51 (33%)
 Frame = +1

Query: 913  PPPXXXFYXXTXXXXPLXXXXXPXPPPXXPXPX*NXPXXPXXKXXLXXPPP 1065
            PPP    Y       P      P PPP  P P    P  P  +     PPP
Sbjct: 92   PPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQPPPREAQLAPPP 142



 Score = 29.9 bits (64), Expect = 4.6
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = +2

Query: 914  PPLXXXFXX*PPXXXPFXXXXSXPPPXXPPXP 1009
            PP    +   PP   P+    S PPP  PP P
Sbjct: 83   PPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPP 114


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,283,723
Number of Sequences: 37544
Number of extensions: 149429
Number of successful extensions: 1002
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4062238548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)