Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_L05
         (888 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0244 + 21822811-21823246,21823337-21823468,21823949-218240...    31   0.93 
02_02_0367 + 9496893-9497022,9498262-9498442,9498519-9498660,949...    28   8.6  

>09_06_0244 +
           21822811-21823246,21823337-21823468,21823949-21824037,
           21824135-21824224,21825033-21825603,21826097-21826734,
           21826978-21827098,21827223-21827337,21828234-21829723,
           21829830-21829901,21830151-21830196,21830413-21830515,
           21830591-21830674,21831035-21831475,21831651-21831746,
           21831896-21832045,21832131-21832274,21832414-21832527,
           21832621-21832803,21832901-21832945,21833058-21833192
          Length = 1764

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
 Frame = +1

Query: 208 NQREESMSDLDMNE--EPTRELFETNLTEMRIRRKLKAYSHDNLIEDELEPIAAQPGPSS 381
           N     + D++MN    P+   + T    +   R   A+ + N +E  L  ++  PGPSS
Sbjct: 356 NLANHMIHDMNMNSISRPSERTYSTANMGITYSRNHLAHDYANFLEKNLNNLSRSPGPSS 415

Query: 382 RR 387
            R
Sbjct: 416 TR 417


>02_02_0367 +
           9496893-9497022,9498262-9498442,9498519-9498660,
           9498757-9498826,9498920-9499089
          Length = 230

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
 Frame = -1

Query: 264 FTSWFFIHVEIRHRFFSLIFSYDG*VDRSAAHDHVRMQQYRHLSDATV--KIDXGGRRDK 91
           F + F++ V + H    L   Y   VD  A   HV + +   + DA V  KI  G  +DK
Sbjct: 168 FLTLFYVAVLMLHTVPILYHKYQDKVDHFAGKAHVELSRQYSVLDAKVLSKIPRGPAKDK 227


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.314    0.131    0.366 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,904,445
Number of Sequences: 37544
Number of extensions: 416009
Number of successful extensions: 812
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 811
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)