Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_L05
         (888 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X89241-1|CAA61529.1|  773|Drosophila melanogaster MSL-2 protein.       32   0.92 
BT011042-1|AAR31113.1|  856|Drosophila melanogaster SD02665p pro...    30   4.9  
AF353512-1|AAK58866.1|  856|Drosophila melanogaster regular prot...    30   4.9  
AE013599-673|AAF59069.2|  856|Drosophila melanogaster CG8643-PA ...    30   4.9  

>X89241-1|CAA61529.1|  773|Drosophila melanogaster MSL-2 protein.
          Length = 773

 Score = 32.3 bits (70), Expect = 0.92
 Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
 Frame = +1

Query: 175 GTSIDLPIIAENQREESMSDLDMNEEPTRELFETNLTEMRIRRKLKAYSHDNLIEDELEP 354
           GTSI   ++AE+  E+   D+  ++ PT+   E    E  +  K +       ++DE EP
Sbjct: 376 GTSIPSEVVAEHMEEDQHLDVHTSQSPTQTEME-EAVEEHVATKTQLGQVQTELQDE-EP 433

Query: 355 I---------AAQPGPSSRRDVLPLECIPLSNFETKNPAIRRKR 459
           +         AA+      +D+  +    L   ++  PA++RKR
Sbjct: 434 LQKDFEDAKAAAEEAKEKEKDLHAISA-ELQKEDSDEPALKRKR 476


>BT011042-1|AAR31113.1|  856|Drosophila melanogaster SD02665p
           protein.
          Length = 856

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +1

Query: 352 PIAAQPGPSSRRDVLPLECIPLSNFETKNPAIRRK-RQCPNQ 474
           PIA  PGP +          PL  +ET+  A++RK RQ  N+
Sbjct: 187 PIAPPPGPPTPNPTPTATPAPLPRYETRRVAMQRKLRQSQNE 228


>AF353512-1|AAK58866.1|  856|Drosophila melanogaster regular
           protein.
          Length = 856

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +1

Query: 352 PIAAQPGPSSRRDVLPLECIPLSNFETKNPAIRRK-RQCPNQ 474
           PIA  PGP +          PL  +ET+  A++RK RQ  N+
Sbjct: 187 PIAPPPGPPTPNPTPTATPAPLPRYETRRVAMQRKLRQSQNE 228


>AE013599-673|AAF59069.2|  856|Drosophila melanogaster CG8643-PA
           protein.
          Length = 856

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +1

Query: 352 PIAAQPGPSSRRDVLPLECIPLSNFETKNPAIRRK-RQCPNQ 474
           PIA  PGP +          PL  +ET+  A++RK RQ  N+
Sbjct: 187 PIAPPPGPPTPNPTPTATPAPLPRYETRRVAMQRKLRQSQNE 228


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.314    0.131    0.366 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,064,387
Number of Sequences: 53049
Number of extensions: 712888
Number of successful extensions: 1631
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1631
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)