Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_L05
         (888 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81556-1|CAB04524.1|  965|Caenorhabditis elegans Hypothetical pr...    31   1.5  
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ...    29   3.4  
AL110477-3|CAB54326.1|  314|Caenorhabditis elegans Hypothetical ...    28   7.8  
AF022981-1|AAG24206.1|  455|Caenorhabditis elegans Hypothetical ...    28   7.8  

>Z81556-1|CAB04524.1|  965|Caenorhabditis elegans Hypothetical
           protein F58G1.1 protein.
          Length = 965

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1

Query: 370 GPSSRRDVLPLECIPLSNFETKNPAIRRKRQ 462
           G    +D+  L CI L  F TKNPA++  R+
Sbjct: 181 GEMDHKDLKSLPCIKLEVFPTKNPAVKFTRE 211


>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
            protein Y32H12A.8 protein.
          Length = 3901

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = +1

Query: 706  HNDRYPEANDVDNLDNEIMDALTLETGNLPDLTEEQSSSLNESTR-RDELWSEQLFIEN 879
            H +   E +D +  + E+M    +E     D  +EQ S L+ES   +DE W E LF +N
Sbjct: 1076 HRESSEELDDEEE-EEEVMPEEEIEE----DQEDEQESVLDESEEDKDEPWDENLFGDN 1129


>AL110477-3|CAB54326.1|  314|Caenorhabditis elegans Hypothetical
           protein Y113G7B.4 protein.
          Length = 314

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 727 LRDTDRYGECSYRRTVRATSCPSDPLSVSLHC 632
           LR+  + G   + + +R   CP D L V  HC
Sbjct: 151 LREITQSGSLLHTKRIRVIDCPGDLLGVLSHC 182


>AF022981-1|AAG24206.1|  455|Caenorhabditis elegans Hypothetical
           protein W03F9.1 protein.
          Length = 455

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +1

Query: 301 RKLKAYSHDNLIEDELEPIAAQPGPSSRRD 390
           RKL A + DN  E+E+EP AA P   S  D
Sbjct: 206 RKLLALADDNEEEEEVEPSAAAPEFKSYED 235


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.314    0.131    0.366 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,059,750
Number of Sequences: 27780
Number of extensions: 364434
Number of successful extensions: 792
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)