Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_L02
(875 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 77 8e-13
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 66 1e-09
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 54 4e-06
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 50 6e-05
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 44 0.004
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 39 0.19
UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer ariet... 37 0.77
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 34 4.1
UniRef50_Q9K456 Cluster: Putative membrane protein; n=2; Strepto... 34 5.5
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 76.6 bits (180), Expect = 8e-13
Identities = 33/41 (80%), Positives = 34/41 (82%)
Frame = +1
Query: 643 PWKLPRALSXFRPCRLPDTCPPFSLREAWRFLIAHAVGISV 765
P + P FRPCRLPDTCPPFSLREAWRFLIAHAVGISV
Sbjct: 49 PLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISV 89
Score = 54.4 bits (125), Expect = 4e-06
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = +3
Query: 600 GGETRQDYKDTRRFPLEAPSCAL 668
GGETRQDYKDTRRFPLEAPSCAL
Sbjct: 35 GGETRQDYKDTRRFPLEAPSCAL 57
Score = 50.4 bits (115), Expect = 6e-05
Identities = 36/82 (43%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Frame = +2
Query: 500 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRRWRNPTGL*RYQAFP---PGSSLVRSP 670
SK+ T R RFSIGSAPLTSITKIDAQVR + FP P +L+ P
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 671 CSDPAAYRIPVRLSPFGKRGAF 736
C R+P PF R A+
Sbjct: 62 C------RLPDTCPPFSLREAW 77
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 65.7 bits (153), Expect = 1e-09
Identities = 48/117 (41%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Frame = +2
Query: 356 GALPLPRSLTRCARSFGCGXRYSSLKG-GNTVIHRNQGXTQERTCEQKASKRPGTVKRPR 532
G +PLPRSLTR ARSFGCG RY G GN + + ++E RPR
Sbjct: 34 GDIPLPRSLTRYARSFGCGERYRLTDGDGNFLEDTRKTLSKEEI-------------RPR 80
Query: 533 CWRFSIGSAPLTSITKIDAQVRRWRNPTGL*RYQAFP---PGSSLVRSPCSDPAAYR 694
RFSIGSAPLTSI K DAQ+ + FP P +L+ P P ++R
Sbjct: 81 RSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLPVSFR 137
Score = 51.6 bits (118), Expect = 3e-05
Identities = 23/30 (76%), Positives = 24/30 (80%)
Frame = +3
Query: 579 KSTLKSEGGETRQDYKDTRRFPLEAPSCAL 668
KS + GGETRQDYKD RRFPL APSCAL
Sbjct: 96 KSDAQISGGETRQDYKDPRRFPLVAPSCAL 125
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 54.4 bits (125), Expect = 4e-06
Identities = 24/30 (80%), Positives = 25/30 (83%)
Frame = +3
Query: 579 KSTLKSEGGETRQDYKDTRRFPLEAPSCAL 668
KS + GGETRQDYKDTRRFPL APSCAL
Sbjct: 64 KSDAQISGGETRQDYKDTRRFPLAAPSCAL 93
Score = 41.5 bits (93), Expect = 0.027
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = +2
Query: 518 VKRPRCWRFSIGSAPLTSITKIDAQV 595
V+ PR RFSIGSAPLTSITK DAQ+
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQI 69
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 50.4 bits (115), Expect = 6e-05
Identities = 32/51 (62%), Positives = 33/51 (64%)
Frame = -3
Query: 573 MLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIP*FLWITVLPPLSEL 421
MLVRGAEPMEKR + L V LL CS L P LWITVLPPLSEL
Sbjct: 1 MLVRGAEPMEKRLRCWLLPVLCFLLT-CSFRL---YPLILWITVLPPLSEL 47
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 672 VPTLPLTGYLSAFLPSGSVA 731
VPTLPLTGYLSAFLPSGSVA
Sbjct: 5 VPTLPLTGYLSAFLPSGSVA 24
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 38.7 bits (86), Expect = 0.19
Identities = 25/56 (44%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = -3
Query: 750 SVSYEKAPRFPKGERRTGIR*AAGSEXGERTRE---LPGGNAWYLYSPVGFRHLLT 592
SVSYEKAPRFPKG++ + +G G R G + SPVGFR LT
Sbjct: 47 SVSYEKAPRFPKGKKAEQV---SGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer
arietinum|Rep: Reverse transcriptase - Cicer arietinum
(Chickpea) (Garbanzo)
Length = 37
Score = 36.7 bits (81), Expect = 0.77
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +2
Query: 440 NTVIHRNQGXTQERTCE 490
NTVIH NQG TQERTCE
Sbjct: 21 NTVIHXNQGITQERTCE 37
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 34.3 bits (75), Expect = 4.1
Identities = 17/29 (58%), Positives = 18/29 (62%)
Frame = +2
Query: 353 LGALPLPRSLTRCARSFGCGXRYSSLKGG 439
L ALPL RS TRC RS GCG S+ G
Sbjct: 281 LVALPLLRSRTRCVRSVGCGGAVSAHSPG 309
>UniRef50_Q9K456 Cluster: Putative membrane protein; n=2;
Streptomyces|Rep: Putative membrane protein -
Streptomyces coelicolor
Length = 314
Score = 33.9 bits (74), Expect = 5.5
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = -1
Query: 767 PTEIPTA*AMRKRHASRREKGGQVSGKRQGRNXESARGSFQGETPGIFIVLSG 609
P E PTA + K EKGG+ GK +G++ + GS PG F G
Sbjct: 88 PKEEPTA-SPAKEKGETDEKGGKDEGKGKGQDEKPDPGSIPSSGPGTFATADG 139
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 522,077,969
Number of Sequences: 1657284
Number of extensions: 9707581
Number of successful extensions: 27420
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 26330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27399
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78292544701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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