Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_K16
         (966 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF260243-1|AAF97549.1|  338|Caenorhabditis elegans stearoyl-CoA ...   190   2e-48
AF022972-8|AAC48239.1|  338|Caenorhabditis elegans Fatty acid de...   190   2e-48
Z95123-2|CAB08356.1|  339|Caenorhabditis elegans Hypothetical pr...   188   7e-48
AF260244-1|AAF97550.1|  339|Caenorhabditis elegans stearoyl-CoA ...   188   7e-48
Z82073-6|CAB04924.1|  333|Caenorhabditis elegans Hypothetical pr...   165   3e-41
AF260242-1|AAF97548.1|  333|Caenorhabditis elegans palmitoyl-CoA...   165   3e-41
U80952-2|AAB38094.1|  309|Caenorhabditis elegans Muscle attachme...    29   5.0  
U80952-1|AAU20846.1|  315|Caenorhabditis elegans Muscle attachme...    29   5.0  

>AF260243-1|AAF97549.1|  338|Caenorhabditis elegans stearoyl-CoA
           desaturase FAT-7 protein.
          Length = 338

 Score =  190 bits (462), Expect = 2e-48
 Identities = 81/135 (60%), Positives = 103/135 (76%), Gaps = 2/135 (1%)
 Frame = +3

Query: 240 VPPSAEKRPWK--IVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGIT 413
           V   ++K P+K  IVWRNV LF  LHV    G Y  +F A W+T++F+  LY+ SG GIT
Sbjct: 33  VQEESKKIPYKMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGIT 92

Query: 414 AGAHRLWAHKSYKARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRG 593
           AGAHRLW+HKSYKA  P+RI L + N IA Q+ +++WARDHR HHK+++TDADPHN TRG
Sbjct: 93  AGAHRLWSHKSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWTDTDADPHNTTRG 152

Query: 594 FFFSHIGWLLLRKHP 638
           FFF+H+GWLL+RKHP
Sbjct: 153 FFFTHMGWLLVRKHP 167


>AF022972-8|AAC48239.1|  338|Caenorhabditis elegans Fatty acid
           desaturase protein 7 protein.
          Length = 338

 Score =  190 bits (462), Expect = 2e-48
 Identities = 81/135 (60%), Positives = 103/135 (76%), Gaps = 2/135 (1%)
 Frame = +3

Query: 240 VPPSAEKRPWK--IVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGIT 413
           V   ++K P+K  IVWRNV LF  LHV    G Y  +F A W+T++F+  LY+ SG GIT
Sbjct: 33  VQEESKKIPYKMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGIT 92

Query: 414 AGAHRLWAHKSYKARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRG 593
           AGAHRLW+HKSYKA  P+RI L + N IA Q+ +++WARDHR HHK+++TDADPHN TRG
Sbjct: 93  AGAHRLWSHKSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWTDTDADPHNTTRG 152

Query: 594 FFFSHIGWLLLRKHP 638
           FFF+H+GWLL+RKHP
Sbjct: 153 FFFTHMGWLLVRKHP 167


>Z95123-2|CAB08356.1|  339|Caenorhabditis elegans Hypothetical
           protein VZK822L.1 protein.
          Length = 339

 Score =  188 bits (457), Expect = 7e-48
 Identities = 81/131 (61%), Positives = 99/131 (75%), Gaps = 2/131 (1%)
 Frame = +3

Query: 252 AEKRPWK--IVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAH 425
           ++K P+K  IVWRNV LF  LH     G Y  +F+A W+T IF   LY+  G GITAGAH
Sbjct: 38  SKKIPYKMEIVWRNVALFAALHFAAAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAH 97

Query: 426 RLWAHKSYKARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRGFFFS 605
           RLW+HKSYKA  P+RI L I N IA Q+ V++WARDHR HHK+++TDADPHN TRGFFF+
Sbjct: 98  RLWSHKSYKATTPMRIFLMILNNIALQNDVIEWARDHRCHHKWTDTDADPHNTTRGFFFA 157

Query: 606 HIGWLLLRKHP 638
           H+GWLL+RKHP
Sbjct: 158 HMGWLLVRKHP 168


>AF260244-1|AAF97550.1|  339|Caenorhabditis elegans stearoyl-CoA
           desaturase FAT-6 protein.
          Length = 339

 Score =  188 bits (457), Expect = 7e-48
 Identities = 81/131 (61%), Positives = 99/131 (75%), Gaps = 2/131 (1%)
 Frame = +3

Query: 252 AEKRPWK--IVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAH 425
           ++K P+K  IVWRNV LF  LH     G Y  +F+A W+T IF   LY+  G GITAGAH
Sbjct: 38  SKKIPYKMEIVWRNVALFAALHFAAAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAH 97

Query: 426 RLWAHKSYKARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRGFFFS 605
           RLW+HKSYKA  P+RI L I N IA Q+ V++WARDHR HHK+++TDADPHN TRGFFF+
Sbjct: 98  RLWSHKSYKATTPMRIFLMILNNIALQNDVIEWARDHRCHHKWTDTDADPHNTTRGFFFA 157

Query: 606 HIGWLLLRKHP 638
           H+GWLL+RKHP
Sbjct: 158 HMGWLLVRKHP 168


>Z82073-6|CAB04924.1|  333|Caenorhabditis elegans Hypothetical
           protein W06D12.3 protein.
          Length = 333

 Score =  165 bits (402), Expect = 3e-41
 Identities = 65/122 (53%), Positives = 91/122 (74%)
 Frame = +3

Query: 270 KIVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAHRLWAHKSY 449
           +IVW+NV LF  LH+G + G Y  +F+A W T  +   L+    +G+T GAHRLWAH++Y
Sbjct: 37  EIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAY 96

Query: 450 KARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRGFFFSHIGWLLLR 629
           KA L  R+ L + N+IAFQ+ ++DWARDHR HHK+++TDADPH+  RG FF+H+GWLL++
Sbjct: 97  KATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKWTDTDADPHSTNRGMFFAHMGWLLVK 156

Query: 630 KH 635
           KH
Sbjct: 157 KH 158


>AF260242-1|AAF97548.1|  333|Caenorhabditis elegans palmitoyl-CoA
           fatty acid desaturaseFAT-5 protein.
          Length = 333

 Score =  165 bits (402), Expect = 3e-41
 Identities = 65/122 (53%), Positives = 91/122 (74%)
 Frame = +3

Query: 270 KIVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAHRLWAHKSY 449
           +IVW+NV LF  LH+G + G Y  +F+A W T  +   L+    +G+T GAHRLWAH++Y
Sbjct: 37  EIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAY 96

Query: 450 KARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRGFFFSHIGWLLLR 629
           KA L  R+ L + N+IAFQ+ ++DWARDHR HHK+++TDADPH+  RG FF+H+GWLL++
Sbjct: 97  KATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKWTDTDADPHSTNRGMFFAHMGWLLVK 156

Query: 630 KH 635
           KH
Sbjct: 157 KH 158


>U80952-2|AAB38094.1|  309|Caenorhabditis elegans Muscle attachment
           abnormal protein1, isoform a protein.
          Length = 309

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +3

Query: 156 MPPQRKQEASWVLYETDANDLPEDAPPHVPPSAEKRP 266
           +PP    +A +  +      +P  +PPH PPS E  P
Sbjct: 66  LPPTPHFQAPFSPHPPPVQQVPSYSPPHAPPSYETYP 102


>U80952-1|AAU20846.1|  315|Caenorhabditis elegans Muscle attachment
           abnormal protein1, isoform b protein.
          Length = 315

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +3

Query: 156 MPPQRKQEASWVLYETDANDLPEDAPPHVPPSAEKRP 266
           +PP    +A +  +      +P  +PPH PPS E  P
Sbjct: 72  LPPTPHFQAPFSPHPPPVQQVPSYSPPHAPPSYETYP 108


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,442,420
Number of Sequences: 27780
Number of extensions: 425028
Number of successful extensions: 1379
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1377
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2500474882
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)