Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_K15
         (925 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0999 - 10128057-10128143,10128346-10128516,10128602-101286...    29   3.9  
07_03_1210 + 24903389-24903695,24904383-24904468,24904545-249046...    28   9.1  
02_05_0430 - 28923784-28923830,28923931-28924341,28924552-289249...    28   9.1  
01_05_0799 + 25334460-25334994,25335060-25335236,25335325-253354...    28   9.1  

>12_01_0999 -
           10128057-10128143,10128346-10128516,10128602-10128677,
           10128787-10128917,10129007-10129111,10129215-10129391,
           10129475-10129623,10129715-10129826,10131819-10132070,
           10132323-10132444,10132537-10133371,10133386-10133489,
           10133582-10133647,10133766-10133888,10133975-10134151,
           10134217-10134387,10134478-10134957,10135357-10135369
          Length = 1116

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +3

Query: 450 NSHKSYGYXGIDKDESIVSQGXXGVYXLXM--GIYIKVXNLIP 572
           NSH S+   G+  D S+ +    GVY   +   +Y ++ NL+P
Sbjct: 437 NSHFSFTSLGVTLDRSVSTAAGTGVYTFRVHGALYHRLDNLVP 479


>07_03_1210 +
           24903389-24903695,24904383-24904468,24904545-24904649,
           24904737-24905531,24905719-24905941,24906318-24906712
          Length = 636

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3

Query: 321 PHDLRNVENPSQRPEHRDPQDYSALNERKSQDKHT 425
           P +L +VE P  R      Q+ +A+    S+DK T
Sbjct: 552 PDNLTSVERPDSRNSAMSDQELAAIQTNSSEDKQT 586


>02_05_0430 -
           28923784-28923830,28923931-28924341,28924552-28924963,
           28925000-28925542,28925790-28925884,28926003-28927033,
           28927304-28927452,28927483-28927523,28927594-28928206
          Length = 1113

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +3

Query: 450 NSHKSYGYXGIDKDESIVSQGXXGVYXLXM--GIYIKVXNLIP 572
           NSH S+   G+  D+ + +    GVY   +   +Y ++ NL+P
Sbjct: 387 NSHFSFTSLGVTLDQRVSTAAGTGVYTFRVHGALYHRLDNLVP 429


>01_05_0799 +
           25334460-25334994,25335060-25335236,25335325-25335447,
           25335559-25335624,25335717-25336685,25336791-25336912,
           25337156-25337549,25337888-25338009,25338253-25338646,
           25338983-25339104,25339348-25339830,25340291-25340960,
           25341713-25342224,25342484-25342540
          Length = 1581

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +3

Query: 450 NSHKSYGYXGIDKDESIVSQGXXGVYXLXM--GIYIKVXNLIP 572
           NSH S+   G+  D ++ +    GVY   +   +Y ++ NL+P
Sbjct: 399 NSHFSFTSLGVTLDHNVSTAAGTGVYTFQVHGALYHRLDNLVP 441


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,135,486
Number of Sequences: 37544
Number of extensions: 262779
Number of successful extensions: 448
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 448
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)