BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_K15
(925 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001270-1|AAN71026.1| 623|Drosophila melanogaster AT04551p pro... 32 0.97
AY051656-1|AAK93080.1| 1098|Drosophila melanogaster LD11008p pro... 31 1.7
AF275903-1|AAG60004.1| 1332|Drosophila melanogaster echinoid pro... 31 1.7
AE014134-697|AAF51045.2| 1332|Drosophila melanogaster CG12676-PA... 31 1.7
AE014298-2529|AAN09434.1| 1370|Drosophila melanogaster CG32562-P... 30 3.9
>BT001270-1|AAN71026.1| 623|Drosophila melanogaster AT04551p
protein.
Length = 623
Score = 32.3 bits (70), Expect = 0.97
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +3
Query: 300 ERRNHKVPHDLRNVENP-SQRPEHRDPQDYSALNERKSQDKHTENLXPNLXNSHKSYGYX 476
+R NH D R NP ++R +H P +R+ QD H L H+ Y
Sbjct: 51 KRHNHSSLRDYRR--NPFARRHKHSSPPP-PVTTQRRRQDYHHNQLNNRYQRRHQQY--- 104
Query: 477 GIDKDESIVSQGXXGVY 527
D ++S+ S G G Y
Sbjct: 105 -FDLEDSLESDGELGEY 120
>AY051656-1|AAK93080.1| 1098|Drosophila melanogaster LD11008p protein.
Length = 1098
Score = 31.5 bits (68), Expect = 1.7
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +3
Query: 324 HDLRNVENPSQRPEHRDPQDYSALNERKSQDKHTENLXPNLXNSHKSYGYXGIDKDESIV 503
H+LRN +NPS++ DP S +K D+H ++ ++ Y +++DE +
Sbjct: 1006 HNLRNSQNPSRQDYCSDPY-ASVQKPKKRVDQHLDSPYHDVSGLPNPYNMEHLEQDEVLP 1064
Query: 504 SQ 509
Q
Sbjct: 1065 PQ 1066
>AF275903-1|AAG60004.1| 1332|Drosophila melanogaster echinoid protein.
Length = 1332
Score = 31.5 bits (68), Expect = 1.7
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +3
Query: 324 HDLRNVENPSQRPEHRDPQDYSALNERKSQDKHTENLXPNLXNSHKSYGYXGIDKDESIV 503
H+LRN +NPS++ DP S +K D+H ++ ++ Y +++DE +
Sbjct: 1240 HNLRNSQNPSRQDYCSDPY-ASVQKPKKRVDQHLDSPYHDVSGLPNPYNMEHLEQDEVLP 1298
Query: 504 SQ 509
Q
Sbjct: 1299 PQ 1300
>AE014134-697|AAF51045.2| 1332|Drosophila melanogaster CG12676-PA
protein.
Length = 1332
Score = 31.5 bits (68), Expect = 1.7
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +3
Query: 324 HDLRNVENPSQRPEHRDPQDYSALNERKSQDKHTENLXPNLXNSHKSYGYXGIDKDESIV 503
H+LRN +NPS++ DP S +K D+H ++ ++ Y +++DE +
Sbjct: 1240 HNLRNSQNPSRQDYCSDPY-ASVQKPKKRVDQHLDSPYHDVSGLPNPYNMEHLEQDEVLP 1298
Query: 504 SQ 509
Q
Sbjct: 1299 PQ 1300
>AE014298-2529|AAN09434.1| 1370|Drosophila melanogaster CG32562-PA
protein.
Length = 1370
Score = 30.3 bits (65), Expect = 3.9
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +3
Query: 258 GGSYNIPDL--GDLIIERRNHKVPHDLRNVENPSQRPEHRDPQDYSALNER 404
GGS +P + G + P LR++EN +RP H + +S L+ R
Sbjct: 131 GGSSMLPAIPVGPATAPVSRDRTPAQLRDLENMMRRPAHTSEEKFSVLDAR 181
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,280,051
Number of Sequences: 53049
Number of extensions: 457337
Number of successful extensions: 1295
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1284
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4546383066
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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