Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_K13
(868 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61950-4|AAC24287.2| 303|Caenorhabditis elegans Hypothetical pr... 66 4e-11
L14710-4|AAK84537.3| 526|Caenorhabditis elegans Hypothetical pr... 62 4e-10
AF039035-3|AAB94163.1| 349|Caenorhabditis elegans Hypothetical ... 50 3e-06
U97002-10|AAB52266.1| 322|Caenorhabditis elegans Hypothetical p... 48 1e-05
AF016421-1|AAC25793.1| 335|Caenorhabditis elegans Hypothetical ... 47 2e-05
U64847-6|AAB04875.1| 380|Caenorhabditis elegans Hypothetical pr... 29 3.3
U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain (pr... 29 4.3
U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain (pr... 29 4.3
U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain (pr... 29 4.3
U23448-5|AAL27227.1| 912|Caenorhabditis elegans Dnaj domain (pr... 29 4.3
Z81035-4|CAB02737.1| 503|Caenorhabditis elegans Hypothetical pr... 29 5.7
AF068708-5|AAK68200.1| 628|Caenorhabditis elegans P granule abn... 29 5.7
AF068708-4|AAC17755.1| 693|Caenorhabditis elegans P granule abn... 29 5.7
AB120729-1|BAC87886.1| 693|Caenorhabditis elegans PGL-3 protein. 29 5.7
U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cycla... 28 7.5
U40028-2|AAY55874.1| 1200|Caenorhabditis elegans Hypothetical pr... 28 7.5
AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor typ... 28 7.5
AF077536-1|AAK31411.2| 643|Caenorhabditis elegans Hypothetical ... 28 9.9
AC006774-8|AAY43992.1| 295|Caenorhabditis elegans Hypothetical ... 28 9.9
>U61950-4|AAC24287.2| 303|Caenorhabditis elegans Hypothetical
protein C45E5.1 protein.
Length = 303
Score = 65.7 bits (153), Expect = 4e-11
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 10/171 (5%)
Frame = +2
Query: 182 KFLDSFDHVLSDCDGVIWTQD-SLPRVGEFFKQ-MKKRGKTVNFVSNNSLRSRANYEAQF 355
+ L +FD + D DGV+WT D +P E+ + K+V +NNS ++ Y +
Sbjct: 10 QLLSNFDTFVFDADGVLWTGDIPIPGAAEWINTLLDDPEKSVFITTNNSTKTLEQYMKKV 69
Query: 356 KAASIDN-GFESLIIPSIAVAEYLK--SVTF-NKTVYCVTCTETKRVL-EAHGFKC-KEG 517
K G E+L+ P+I + +Y K S F N+ +Y + K+ L E G KC G
Sbjct: 70 KKMRFGRLGRENLLSPTIVLCDYFKQNSDKFENQYIYLIGVENLKKSLEEGGGVKCFGTG 129
Query: 518 PDLGPEYY-GEYIQYLEDDEEI-GAVVFDSDFKINLPKMYRAITYLKRPEV 664
PD Y G++I ++ +I AVV D + PK+ +A +L P V
Sbjct: 130 PDHKDNYTDGDFINEVDVKSKIPKAVVVSFDSHFSYPKLMKAANFLADPLV 180
>L14710-4|AAK84537.3| 526|Caenorhabditis elegans Hypothetical
protein K02D10.1a protein.
Length = 526
Score = 62.5 bits (145), Expect = 4e-10
Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 9/171 (5%)
Frame = +2
Query: 179 HKFLDSFDHVLSDCDGVIWTQD-SLPRVGEFFK-QMKKRGKTVNFVSNNSLRSRANYEAQ 352
++ L ++D L D DGV+WT D +P E+ ++ K V ++NNS ++ Y +
Sbjct: 9 NELLANYDTFLFDADGVLWTGDIPVPGAIEWINLLLEDPSKKVFVLTNNSTKTLEQYMKK 68
Query: 353 FKAASIDN-GFESLIIPSIAVAEYLKSVT---FNKTVYCVTCTETKRVLEAH-GFKC-KE 514
+ + G ++I P+I +A+YLKS + VY + K LE G KC
Sbjct: 69 IEKLGFGHLGRNNVISPAIVLADYLKSNADKFSGEYVYLIGTENLKATLENDGGVKCFGT 128
Query: 515 GPD-LGPEYYGEYIQYLEDDEEIGAVVFDSDFKINLPKMYRAITYLKRPEV 664
GPD + G++I ++ AVV D + PK+ +A YL+ P V
Sbjct: 129 GPDSIRDHTDGDFIHKVDMSIAPKAVVCSYDAHFSYPKIMKASNYLQDPSV 179
>AF039035-3|AAB94163.1| 349|Caenorhabditis elegans Hypothetical
protein C53A3.2 protein.
Length = 349
Score = 49.6 bits (113), Expect = 3e-06
Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 9/179 (5%)
Frame = +2
Query: 155 LDLSVEDLHKFLDSFDHVLSDCDGVIWTQDS-LPRVGEFFKQMKKRGKTVNFVSNNSLRS 331
L L + K + + D + D DGV+W +S +P + K K + ++NN+ +S
Sbjct: 42 LPLDPKSFSKVMKTIDTFIFDADGVLWLGESVMPGSPRLIDYLVKHNKQIIVLTNNATKS 101
Query: 332 RANYE---AQFKAASIDNGFESLIIPSIAVAEYLKSVTFN-KTVYCVTCTETKRVLEAHG 499
RA Y A+ S +L+ P+ VA+ L + K VY + + ++ G
Sbjct: 102 RAVYAKKLAKLGYNSSKMNKNNLVNPAAVVADTLHRAGLDGKRVYLIGEQGLRDEMDELG 161
Query: 500 FK-CKEGPDLGPEY---YGEYIQYLEDDEEIGAVVFDSDFKINLPKMYRAITYLKRPEV 664
+ GP+ + G ++ ++ +E +GAVV + + KM +A YL+ V
Sbjct: 162 IEYFGHGPEKKQDEADGSGAFMYDIKLEENVGAVVVGYEKHFDYVKMMKASNYLREEGV 220
>U97002-10|AAB52266.1| 322|Caenorhabditis elegans Hypothetical
protein K09H11.7 protein.
Length = 322
Score = 47.6 bits (108), Expect = 1e-05
Identities = 40/170 (23%), Positives = 77/170 (45%), Gaps = 9/170 (5%)
Frame = +2
Query: 182 KFLDSFDHVLSDCDGVIWTQDS-LPRVGEFFKQMKKRGKTVNFVSNNSLRSRANYEAQFK 358
K + + D + D DGV+W +S +P + K K + ++NN+ +SRA Y +
Sbjct: 24 KVMKTIDTFIFDADGVLWLGESVMPGSPRLIDYLVKHNKQIIVLTNNATKSRAVYAKKLA 83
Query: 359 AASIDNGF---ESLIIPSIAVAEYLKSVTFN-KTVYCVTCTETKRVLEAHGFKC-KEGPD 523
++ +L+ P+ VA+ L + K VY + + ++ G + GP+
Sbjct: 84 KLGYNSSKMNKNNLVNPAAVVADTLHRAGLDGKRVYLIGEQGLRDEMDELGIEYFGHGPE 143
Query: 524 LGPEYY---GEYIQYLEDDEEIGAVVFDSDFKINLPKMYRAITYLKRPEV 664
+ G ++ ++ +E +GAVV + + KM +A YL+ V
Sbjct: 144 KKQDEADGSGAFMYDIKLEENVGAVVVGYEKHFDYVKMMKASNYLREEGV 193
>AF016421-1|AAC25793.1| 335|Caenorhabditis elegans Hypothetical
protein F44E7.2 protein.
Length = 335
Score = 47.2 bits (107), Expect = 2e-05
Identities = 40/170 (23%), Positives = 77/170 (45%), Gaps = 9/170 (5%)
Frame = +2
Query: 182 KFLDSFDHVLSDCDGVIWTQDS-LPRVGEFFKQMKKRGKTVNFVSNNSLRSRANYEAQFK 358
K + + D + D DGV+W +S +P + K K + ++NN+ +SRA Y +
Sbjct: 41 KVMKTIDTFIFDADGVLWLGESVMPGSPRLIDYLVKHNKQIIVLTNNATKSRAVYAKKLA 100
Query: 359 AASIDNGF---ESLIIPSIAVAEYLKSVTFN-KTVYCVTCTETKRVLEAHGFKC-KEGPD 523
++ +L+ P+ VA+ L + K VY + + ++ G + GP+
Sbjct: 101 KLGYNSSKMNKNNLVNPAAVVADTLHRAGLDGKRVYLIGEQGLRDEMDELGIEYFGHGPE 160
Query: 524 LGPEYY---GEYIQYLEDDEEIGAVVFDSDFKINLPKMYRAITYLKRPEV 664
+ G ++ ++ +E +GAVV + + KM +A YL+ V
Sbjct: 161 KKQDEADGSGAFMYDIKLEENVGAVVVGYEKHFDYIKMMKASNYLREEGV 210
>U64847-6|AAB04875.1| 380|Caenorhabditis elegans Hypothetical
protein F08F3.8 protein.
Length = 380
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 365 SIDNGFESLIIPSIAVAEYLK 427
+IDNGFE +++P + A Y K
Sbjct: 50 AIDNGFEQILVPKVCAANYDK 70
>U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform b
protein.
Length = 849
Score = 29.1 bits (62), Expect = 4.3
Identities = 28/133 (21%), Positives = 56/133 (42%), Gaps = 2/133 (1%)
Frame = +2
Query: 116 KVLSIMGIESKHLLDLSVEDLHKFLDSFDHVLSDCDGVIWTQDSLPRVGEFFKQMKKRGK 295
K+ S + ++D ED H+ S HV + +G + +D RV + ++ +K K
Sbjct: 469 KIFSRSSSPADDIIDTEEEDPHRVRSSSTHVHQNGNGQV-KKDQRKRVAQVNQRRRKGRK 527
Query: 296 TVNFVSNNSLRSRANYEAQFKAASIDNGFESLIIPSIAVAEYLKS--VTFNKTVYCVTCT 469
N+ + + F G + ++ + V + + VTF K+++ TC
Sbjct: 528 EEPSWLQNAFSTFVDV-LFFVWGYACFGLQWTLLLIVEVCQKIADIFVTFGKSLWAGTCK 586
Query: 470 ETKRVLEAHGFKC 508
+ V+ A + C
Sbjct: 587 GLRNVILAFVYLC 599
>U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform d
protein.
Length = 868
Score = 29.1 bits (62), Expect = 4.3
Identities = 28/133 (21%), Positives = 56/133 (42%), Gaps = 2/133 (1%)
Frame = +2
Query: 116 KVLSIMGIESKHLLDLSVEDLHKFLDSFDHVLSDCDGVIWTQDSLPRVGEFFKQMKKRGK 295
K+ S + ++D ED H+ S HV + +G + +D RV + ++ +K K
Sbjct: 469 KIFSRSSSPADDIIDTEEEDPHRVRSSSTHVHQNGNGQV-KKDQRKRVAQVNQRRRKGRK 527
Query: 296 TVNFVSNNSLRSRANYEAQFKAASIDNGFESLIIPSIAVAEYLKS--VTFNKTVYCVTCT 469
N+ + + F G + ++ + V + + VTF K+++ TC
Sbjct: 528 EEPSWLQNAFSTFVDV-LFFVWGYACFGLQWTLLLIVEVCQKIADIFVTFGKSLWAGTCK 586
Query: 470 ETKRVLEAHGFKC 508
+ V+ A + C
Sbjct: 587 GLRNVILAFVYLC 599
>U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform a
protein.
Length = 915
Score = 29.1 bits (62), Expect = 4.3
Identities = 28/133 (21%), Positives = 56/133 (42%), Gaps = 2/133 (1%)
Frame = +2
Query: 116 KVLSIMGIESKHLLDLSVEDLHKFLDSFDHVLSDCDGVIWTQDSLPRVGEFFKQMKKRGK 295
K+ S + ++D ED H+ S HV + +G + +D RV + ++ +K K
Sbjct: 469 KIFSRSSSPADDIIDTEEEDPHRVRSSSTHVHQNGNGQV-KKDQRKRVAQVNQRRRKGRK 527
Query: 296 TVNFVSNNSLRSRANYEAQFKAASIDNGFESLIIPSIAVAEYLKS--VTFNKTVYCVTCT 469
N+ + + F G + ++ + V + + VTF K+++ TC
Sbjct: 528 EEPSWLQNAFSTFVDV-LFFVWGYACFGLQWTLLLIVEVCQKIADIFVTFGKSLWAGTCK 586
Query: 470 ETKRVLEAHGFKC 508
+ V+ A + C
Sbjct: 587 GLRNVILAFVYLC 599
>U23448-5|AAL27227.1| 912|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform c
protein.
Length = 912
Score = 29.1 bits (62), Expect = 4.3
Identities = 28/133 (21%), Positives = 56/133 (42%), Gaps = 2/133 (1%)
Frame = +2
Query: 116 KVLSIMGIESKHLLDLSVEDLHKFLDSFDHVLSDCDGVIWTQDSLPRVGEFFKQMKKRGK 295
K+ S + ++D ED H+ S HV + +G + +D RV + ++ +K K
Sbjct: 468 KIFSRSSSPADDIIDTEEEDPHRVRSSSTHVHQNGNGQV-KKDQRKRVAQVNQRRRKGRK 526
Query: 296 TVNFVSNNSLRSRANYEAQFKAASIDNGFESLIIPSIAVAEYLKS--VTFNKTVYCVTCT 469
N+ + + F G + ++ + V + + VTF K+++ TC
Sbjct: 527 EEPSWLQNAFSTFVDV-LFFVWGYACFGLQWTLLLIVEVCQKIADIFVTFGKSLWAGTCK 585
Query: 470 ETKRVLEAHGFKC 508
+ V+ A + C
Sbjct: 586 GLRNVILAFVYLC 598
>Z81035-4|CAB02737.1| 503|Caenorhabditis elegans Hypothetical
protein C15H11.5 protein.
Length = 503
Score = 28.7 bits (61), Expect = 5.7
Identities = 23/93 (24%), Positives = 42/93 (45%)
Frame = +2
Query: 128 IMGIESKHLLDLSVEDLHKFLDSFDHVLSDCDGVIWTQDSLPRVGEFFKQMKKRGKTVNF 307
+MG ++ L V +L FL + D LSD V +T +P + G +V F
Sbjct: 87 LMGYAARTLKSSYVTNLDFFLRNLDTALSDL--VFFTNTLIPL--SIVAEATVFGSSVKF 142
Query: 308 VSNNSLRSRANYEAQFKAASIDNGFESLIIPSI 406
V+ +++ ++ Y K + + S ++P I
Sbjct: 143 VTRDNIGAKIMYLKYIKEHNQMHLLHSFLVPQI 175
>AF068708-5|AAK68200.1| 628|Caenorhabditis elegans P granule
abnormality protein 3,isoform b protein.
Length = 628
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +2
Query: 101 QKKSLKVLSIMGIESKHLLDLSVEDLHKFLDSFDHV 208
+KKSL L + +SK+LL S + + LDS DHV
Sbjct: 338 EKKSLNQLQFLSPKSKNLLVDSFKKFAQGLDSKDHV 373
>AF068708-4|AAC17755.1| 693|Caenorhabditis elegans P granule
abnormality protein 3,isoform a protein.
Length = 693
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +2
Query: 101 QKKSLKVLSIMGIESKHLLDLSVEDLHKFLDSFDHV 208
+KKSL L + +SK+LL S + + LDS DHV
Sbjct: 403 EKKSLNQLQFLSPKSKNLLVDSFKKFAQGLDSKDHV 438
>AB120729-1|BAC87886.1| 693|Caenorhabditis elegans PGL-3 protein.
Length = 693
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +2
Query: 101 QKKSLKVLSIMGIESKHLLDLSVEDLHKFLDSFDHV 208
+KKSL L + +SK+LL S + + LDS DHV
Sbjct: 403 EKKSLNQLQFLSPKSKNLLVDSFKKFAQGLDSKDHV 438
>U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cyclase
protein 8 protein.
Length = 1206
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 431 VTFNKTVYCVTCTETKRVLEAHGFKCKE 514
+TFN +Y C ET+R+L +G + E
Sbjct: 10 LTFNVLIYLAACQETERILANNGTEDNE 37
>U40028-2|AAY55874.1| 1200|Caenorhabditis elegans Hypothetical
protein T05A7.11 protein.
Length = 1200
Score = 28.3 bits (60), Expect = 7.5
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +2
Query: 518 PDLGPEYYGEYIQYLEDDEEIGAVVFDSDFKI 613
P LGP+Y G ++E ++ +++D+D ++
Sbjct: 485 PSLGPKYNGCVFAWIEQEQSYWQMMYDNDIRM 516
>AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor type
guanyly cyclase protein.
Length = 1152
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 431 VTFNKTVYCVTCTETKRVLEAHGFKCKE 514
+TFN +Y C ET+R+L +G + E
Sbjct: 10 LTFNVLIYLAACQETERILANNGTEDNE 37
>AF077536-1|AAK31411.2| 643|Caenorhabditis elegans Hypothetical
protein C16A11.5 protein.
Length = 643
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -1
Query: 739 VKLPSLNPKDQFSWAPSYQSPHL*RDLRSFQVGYGSVHF 623
+K+P+L K + + ++ HL R L SF+V S HF
Sbjct: 268 LKIPTLLFKSELRFPHFIKTAHLHRLLASFEVSLSSFHF 306
>AC006774-8|AAY43992.1| 295|Caenorhabditis elegans Hypothetical
protein Y46H3A.7 protein.
Length = 295
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 518 PDLGPEYYGEYIQYLEDDEEIGAVVFDSDFKINL 619
P +G Y+ Q L+D EI + FDS +NL
Sbjct: 100 PSVGGAYFSSVNQPLQDQAEIRKIGFDSAEDVNL 133
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,670,298
Number of Sequences: 27780
Number of extensions: 355139
Number of successful extensions: 878
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -