Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_K11
         (920 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0332 - 29332520-29332818,29333511-29333725,29334380-293344...    29   3.9  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   3.9  
12_02_0299 - 17051570-17052474,17053542-17053755                       29   6.9  
09_03_0145 - 12749288-12751510                                         29   6.9  

>05_07_0332 - 29332520-29332818,29333511-29333725,29334380-29334408,
            29334956-29335045,29335120-29335155,29335222-29336553,
            29337331-29337497,29337519-29337724,29337815-29338036,
            29338332-29338381,29338754-29338870,29339471-29339551,
            29339656-29339694,29340464-29340636,29340769-29340826,
            29340934-29340987,29341066-29341613,29341695-29341755,
            29342180-29342260,29342448-29342630,29342908-29343162,
            29343304-29343423,29343497-29344901,29344988-29345085,
            29345164-29345218,29345307-29345366,29346498-29346697
          Length = 2077

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +2

Query: 878  PPPPPXXGKKXPPP 919
            PPPPP  GK  PPP
Sbjct: 1935 PPPPPVEGKPKPPP 1948


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +2

Query: 872 GXPPPPPXXGKKXPPP 919
           G PPPPP  G   PPP
Sbjct: 352 GPPPPPPPKGPSPPPP 367



 Score = 29.1 bits (62), Expect = 5.2
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +2

Query: 872 GXPPPPPXXGKKXPPP 919
           G PPPPP  G   PPP
Sbjct: 343 GPPPPPPAKGPPPPPP 358



 Score = 28.3 bits (60), Expect = 9.1
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +2

Query: 878 PPPPPXXGKKXPPP 919
           PPPPP  GKK  PP
Sbjct: 365 PPPPPPGGKKGGPP 378


>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 16/53 (30%), Positives = 19/53 (35%)
 Frame = +1

Query: 469 PLXXXFPXXPPXXXPPXKVXFXPXPPXFXXXFXPKKXFFFXXPPXKKXXFXKK 627
           PL   +P  PP   PP      P PP F   F P    F   P      + +K
Sbjct: 312 PLPSFYPSPPPPPPPPP-----PPPPSFPWPFPPLAPLFPPYPSPPPSMYSRK 359


>09_03_0145 - 12749288-12751510
          Length = 740

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +2

Query: 851 KKKXXXXGXPPPPPXXGKKXPPP 919
           K K      PPPPP  G + PPP
Sbjct: 22  KPKPTNPSPPPPPPPPGIQPPPP 44


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,791,469
Number of Sequences: 37544
Number of extensions: 265949
Number of successful extensions: 1837
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1316
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)