Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_K11
         (920 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical pr...    29   4.7  
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr...    29   6.2  

>Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical protein
            F22G12.5 protein.
          Length = 2396

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +2

Query: 878  PPPPPXXGKKXPPP 919
            PPPPP  GK  PPP
Sbjct: 1508 PPPPPASGKTIPPP 1521


>Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical protein
            F22G12.5 protein.
          Length = 2396

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +2

Query: 878  PPPPPXXGKKXPPP 919
            PPPPP  GK  PPP
Sbjct: 1508 PPPPPASGKTIPPP 1521


>Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical
           protein T24B8.4 protein.
          Length = 866

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +2

Query: 872 GXPPPPPXXGKKXPPP 919
           G PPPPP  G   PPP
Sbjct: 103 GIPPPPPMFGAPPPPP 118


>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical protein
            K01A6.2 protein.
          Length = 1092

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +2

Query: 872  GXPPPPPXXGKKXPPP 919
            G PPPPP   +K PPP
Sbjct: 971  GLPPPPPSVYEKHPPP 986


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,000,310
Number of Sequences: 27780
Number of extensions: 187168
Number of successful extensions: 844
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 606
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)