Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_K10
         (878 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK054768-1|BAB70804.1|  168|Homo sapiens protein ( Homo sapiens ...    38   0.063
AJ010482-1|CAB51856.1|  831|Homo sapiens Myopodin protein protein.     34   0.78 
AY024361-1|AAK00583.1| 4911|Homo sapiens MLL3 protein.                 33   1.8  
AF264750-1|AAF74766.2| 4025|Homo sapiens ALR-like protein protein.     33   1.8  
AC006474-1|AAS00364.1| 2185|Homo sapiens unknown protein.              33   1.8  
AB040939-1|BAA96030.2| 3310|Homo sapiens KIAA1506 protein protein.     33   1.8  

>AK054768-1|BAB70804.1|  168|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30206 fis, clone BRACE2001508, weakly similar to
           PROTEIN-LYSINE 6-OXIDASE PRECURSOR (EC 1.4.3.13). ).
          Length = 168

 Score = 37.5 bits (83), Expect = 0.063
 Identities = 25/64 (39%), Positives = 30/64 (46%)
 Frame = +1

Query: 40  LKILALGQRSGTVPGYPRATRPPQHVAWGRVGPVRRPAASSDVARPLDWPRY*RDSPRRL 219
           L++L+  +R     G P A  P QH  W R GP RRP  S  + R   WP   R  P   
Sbjct: 43  LQLLSADRRPLRRTGAPPAQGPAQH-PWSR-GPPRRPPRSVKLCRAQQWPET-RADPLPA 99

Query: 220 ATRQ 231
            TRQ
Sbjct: 100 GTRQ 103


>AJ010482-1|CAB51856.1|  831|Homo sapiens Myopodin protein protein.
          Length = 831

 Score = 33.9 bits (74), Expect = 0.78
 Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
 Frame = +1

Query: 79  PGYPRATRPPQHVAWGRVGPVRRPAASSDVARPLDW--PRY*RDSPRRLATRQTRISI 246
           P Y   T PP   + G   P+  PA      +P  W  P +  DS  R+A+R  RIS+
Sbjct: 358 PPYSAVTPPPDAFSRGVSSPIAGPAQPPPWPQPAPWSQPAF-YDSSERIASRDERISV 414


>AY024361-1|AAK00583.1| 4911|Homo sapiens MLL3 protein.
          Length = 4911

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +1

Query: 58   GQRSGTVPGYPRATRPPQHVAWGRVGPVRRPAASSDVARPLD 183
            G   GT+P   R   PPQ +    V P  R + S D+ RPL+
Sbjct: 2486 GGSHGTMPSQERFLVPPQQIQGSGVSPQLRRSVSVDMPRPLN 2527


>AF264750-1|AAF74766.2| 4025|Homo sapiens ALR-like protein protein.
          Length = 4025

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +1

Query: 58   GQRSGTVPGYPRATRPPQHVAWGRVGPVRRPAASSDVARPLD 183
            G   GT+P   R   PPQ +    V P  R + S D+ RPL+
Sbjct: 1547 GGSHGTMPSQERFLVPPQQIQGSGVSPQLRRSVSVDMPRPLN 1588


>AC006474-1|AAS00364.1| 2185|Homo sapiens unknown protein.
          Length = 2185

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +1

Query: 58   GQRSGTVPGYPRATRPPQHVAWGRVGPVRRPAASSDVARPLD 183
            G   GT+P   R   PPQ +    V P  R + S D+ RPL+
Sbjct: 1547 GGSHGTMPSQERFLVPPQQIQGSGVSPQLRRSVSVDMPRPLN 1588


>AB040939-1|BAA96030.2| 3310|Homo sapiens KIAA1506 protein protein.
          Length = 3310

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +1

Query: 58   GQRSGTVPGYPRATRPPQHVAWGRVGPVRRPAASSDVARPLD 183
            G   GT+P   R   PPQ +    V P  R + S D+ RPL+
Sbjct: 1931 GGSHGTMPSQERFLVPPQQIQGSGVSPQLRRSVSVDMPRPLN 1972


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,309,845
Number of Sequences: 237096
Number of extensions: 1854497
Number of successful extensions: 8009
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8001
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)