Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_K01
(890 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 146 2e-35
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 146 2e-35
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 146 2e-35
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 143 1e-34
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 139 3e-33
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 139 3e-33
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 94 1e-19
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 94 1e-19
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 87 2e-17
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 85 6e-17
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 84 1e-16
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 84 1e-16
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 84 1e-16
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 84 1e-16
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 82 5e-16
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 82 6e-16
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 82 6e-16
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 79 6e-15
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 79 6e-15
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 79 6e-15
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 79 6e-15
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 78 7e-15
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 69 3e-12
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 69 3e-12
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 58 8e-09
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 58 8e-09
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 146 bits (354), Expect = 2e-35
Identities = 65/76 (85%), Positives = 68/76 (89%)
Frame = +3
Query: 444 GXYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAXGHYTEGAELVDSV 623
G YVPRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWA GHYTEGAELVD+V
Sbjct: 57 GKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNV 116
Query: 624 LXVVRKXXXXCDCLXG 671
L VVRK CDCL G
Sbjct: 117 LDVVRKEAEGCDCLQG 132
Score = 99 bits (238), Expect = 2e-21
Identities = 42/54 (77%), Positives = 47/54 (87%)
Frame = +2
Query: 278 REIVHIQAGQCGNHIGSXFWEIISDEHGIXPTGAYHGDSDLQLXRINVYYNEAS 439
REIVH+QAGQCGN IG+ FWE+ISDEHGI P G Y G+SDLQL RINVYYNEA+
Sbjct: 2 REIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEAN 55
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 146 bits (353), Expect = 2e-35
Identities = 64/76 (84%), Positives = 68/76 (89%)
Frame = +3
Query: 444 GXYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAXGHYTEGAELVDSV 623
G YVPRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWA GHYTEGAELVD+V
Sbjct: 57 GKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNV 116
Query: 624 LXVVRKXXXXCDCLXG 671
L V+RK CDCL G
Sbjct: 117 LDVIRKEAEGCDCLQG 132
Score = 97.5 bits (232), Expect = 1e-20
Identities = 41/54 (75%), Positives = 47/54 (87%)
Frame = +2
Query: 278 REIVHIQAGQCGNHIGSXFWEIISDEHGIXPTGAYHGDSDLQLXRINVYYNEAS 439
REIVH+QAGQCGN IGS FWE+ISDEHGI P G + G+SDLQL RI+VYYNEA+
Sbjct: 2 REIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEAN 55
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 146 bits (353), Expect = 2e-35
Identities = 64/76 (84%), Positives = 68/76 (89%)
Frame = +3
Query: 444 GXYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAXGHYTEGAELVDSV 623
G YVPRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWA GHYTEGAELVD+V
Sbjct: 57 GKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNV 116
Query: 624 LXVVRKXXXXCDCLXG 671
L V+RK CDCL G
Sbjct: 117 LDVIRKEAEGCDCLQG 132
Score = 96.3 bits (229), Expect = 3e-20
Identities = 40/54 (74%), Positives = 47/54 (87%)
Frame = +2
Query: 278 REIVHIQAGQCGNHIGSXFWEIISDEHGIXPTGAYHGDSDLQLXRINVYYNEAS 439
REIVH+QAGQCGN IGS FWE+ISDEHGI P G + G++DLQL RI+VYYNEA+
Sbjct: 2 REIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEAN 55
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 143 bits (347), Expect = 1e-34
Identities = 64/76 (84%), Positives = 67/76 (88%)
Frame = +3
Query: 444 GXYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAXGHYTEGAELVDSV 623
G YVPRA LVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWA GHYTEGAELVD+V
Sbjct: 57 GKYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNV 116
Query: 624 LXVVRKXXXXCDCLXG 671
L VVRK CDCL G
Sbjct: 117 LDVVRKEAESCDCLQG 132
Score = 107 bits (258), Expect = 8e-24
Identities = 47/54 (87%), Positives = 50/54 (92%)
Frame = +2
Query: 278 REIVHIQAGQCGNHIGSXFWEIISDEHGIXPTGAYHGDSDLQLXRINVYYNEAS 439
REIVHIQAGQCGN IG+ FWE+ISDEHGI PTGAY+GDSDLQL RINVYYNEAS
Sbjct: 2 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEAS 55
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 139 bits (336), Expect = 3e-33
Identities = 62/74 (83%), Positives = 66/74 (89%)
Frame = +3
Query: 450 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAXGHYTEGAELVDSVLX 629
YVPRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWA GHYTEGAELVD+VL
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 630 VVRKXXXXCDCLXG 671
VVRK DCL G
Sbjct: 119 VVRKEAESTDCLQG 132
Score = 102 bits (244), Expect = 4e-22
Identities = 45/53 (84%), Positives = 47/53 (88%)
Frame = +2
Query: 278 REIVHIQAGQCGNHIGSXFWEIISDEHGIXPTGAYHGDSDLQLXRINVYYNEA 436
REIVHIQAGQCGN IGS FWE+ISDEHGI P+G Y GDSDLQL RINVYYNEA
Sbjct: 2 REIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEA 54
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 139 bits (336), Expect = 3e-33
Identities = 62/74 (83%), Positives = 66/74 (89%)
Frame = +3
Query: 450 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAXGHYTEGAELVDSVLX 629
YVPRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWA GHYTEGAELVD+VL
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 630 VVRKXXXXCDCLXG 671
VVRK DCL G
Sbjct: 119 VVRKEAESTDCLQG 132
Score = 102 bits (244), Expect = 4e-22
Identities = 45/53 (84%), Positives = 47/53 (88%)
Frame = +2
Query: 278 REIVHIQAGQCGNHIGSXFWEIISDEHGIXPTGAYHGDSDLQLXRINVYYNEA 436
REIVHIQAGQCGN IGS FWE+ISDEHGI P+G Y GDSDLQL RINVYYNEA
Sbjct: 2 REIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEA 54
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 93.9 bits (223), Expect = 1e-19
Identities = 41/74 (55%), Positives = 56/74 (75%)
Frame = +3
Query: 450 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAXGHYTEGAELVDSVLX 629
YVPRAILVDL+P +++ VRS +G++F P+N V G+SGAGNNW+ G+Y +GAE+VD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 630 VVRKXXXXCDCLXG 671
V+R+ D L G
Sbjct: 119 VIRREAEAADSLEG 132
Score = 72.5 bits (170), Expect = 4e-13
Identities = 29/52 (55%), Positives = 37/52 (71%)
Frame = +2
Query: 278 REIVHIQAGQCGNHIGSXFWEIISDEHGIXPTGAYHGDSDLQLXRINVYYNE 433
+EI+++Q GQCGN IG+ FWE IS+EHG+ G Y GD+ QL RI YY E
Sbjct: 2 KEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKE 53
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 93.9 bits (223), Expect = 1e-19
Identities = 41/74 (55%), Positives = 56/74 (75%)
Frame = +3
Query: 450 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAXGHYTEGAELVDSVLX 629
YVPRAILVDL+P +++ VRS +G++F P+N V G+SGAGNNW+ G+Y +GAE+VD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 630 VVRKXXXXCDCLXG 671
V+R+ D L G
Sbjct: 119 VIRREAEAADSLEG 132
Score = 72.5 bits (170), Expect = 4e-13
Identities = 29/52 (55%), Positives = 37/52 (71%)
Frame = +2
Query: 278 REIVHIQAGQCGNHIGSXFWEIISDEHGIXPTGAYHGDSDLQLXRINVYYNE 433
+EI+++Q GQCGN IG+ FWE IS+EHG+ G Y GD+ QL RI YY E
Sbjct: 2 KEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKE 53
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 87.0 bits (206), Expect = 2e-17
Identities = 38/76 (50%), Positives = 50/76 (65%)
Frame = +3
Query: 444 GXYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAXGHYTEGAELVDSV 623
G +VPRAI VDLEP +D +R+G +G +F PD + G+ A NN+A GHYT G EL+D V
Sbjct: 62 GKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVV 121
Query: 624 LXVVRKXXXXCDCLXG 671
L +RK C+ L G
Sbjct: 122 LDRIRKQTENCEGLQG 137
Score = 34.7 bits (76), Expect = 0.090
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 278 REIVHIQAGQCGNHIGSXFWEIISDEHGIXPTG 376
RE V I GQ G IG+ WE+ EHG+ G
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAG 38
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 85.0 bits (201), Expect = 6e-17
Identities = 37/78 (47%), Positives = 50/78 (64%)
Frame = +3
Query: 438 PYGXYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAXGHYTEGAELVD 617
P G +VPRAI VDLEP +D VR+G + ++F P+ + G+ A NN+A GHYT G EL+D
Sbjct: 57 PSGKHVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELID 116
Query: 618 SVLXVVRKXXXXCDCLXG 671
V+ VR+ C L G
Sbjct: 117 VVMDRVRRLTERCQSLQG 134
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 278 REIVHIQAGQCGNHIGSXFWEIISDEHGIXPTGAYHGDSD--LQLXRINVYYNE 433
REIV I GQ G IG+ WE+ EHGI P G D+ ++ N +++E
Sbjct: 2 REIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSE 55
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 83.8 bits (198), Expect = 1e-16
Identities = 35/76 (46%), Positives = 50/76 (65%)
Frame = +3
Query: 444 GXYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAXGHYTEGAELVDSV 623
G YVPR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A GHYT G EL+D+V
Sbjct: 57 GRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTV 116
Query: 624 LXVVRKXXXXCDCLXG 671
L +R+ C L G
Sbjct: 117 LDRIRRLADNCSGLQG 132
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +2
Query: 278 REIVHIQAGQCGNHIGSXFWEIISDEHGIXPTG 376
RE++ I GQ G IG+ WE+ EHGI P G
Sbjct: 2 REVISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 83.8 bits (198), Expect = 1e-16
Identities = 35/76 (46%), Positives = 50/76 (65%)
Frame = +3
Query: 444 GXYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAXGHYTEGAELVDSV 623
G YVPR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A GHYT G EL+D+V
Sbjct: 57 GRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTV 116
Query: 624 LXVVRKXXXXCDCLXG 671
L +R+ C L G
Sbjct: 117 LDRIRRLADNCSGLQG 132
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +2
Query: 278 REIVHIQAGQCGNHIGSXFWEIISDEHGIXPTGAYHGDSDLQLXRINVYYNE 433
RE++ I GQ G IG+ WE+ EHGI P G D ++++
Sbjct: 2 REVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSD 53
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 83.8 bits (198), Expect = 1e-16
Identities = 35/76 (46%), Positives = 50/76 (65%)
Frame = +3
Query: 444 GXYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAXGHYTEGAELVDSV 623
G YVPR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A GHYT G EL+D+V
Sbjct: 57 GRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTV 116
Query: 624 LXVVRKXXXXCDCLXG 671
L +R+ C L G
Sbjct: 117 LDRIRRLADNCSGLQG 132
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +2
Query: 278 REIVHIQAGQCGNHIGSXFWEIISDEHGIXPTGAYHGDSDLQLXRINVYYNE 433
RE++ I GQ G IG+ WE+ EHGI P G D ++++
Sbjct: 2 REVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSD 53
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 83.8 bits (198), Expect = 1e-16
Identities = 35/76 (46%), Positives = 50/76 (65%)
Frame = +3
Query: 444 GXYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAXGHYTEGAELVDSV 623
G YVPR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A GHYT G EL+D+V
Sbjct: 57 GRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTV 116
Query: 624 LXVVRKXXXXCDCLXG 671
L +R+ C L G
Sbjct: 117 LDRIRRLADNCSGLQG 132
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +2
Query: 278 REIVHIQAGQCGNHIGSXFWEIISDEHGIXPTG 376
RE++ I GQ G IG+ WE+ EHGI P G
Sbjct: 2 REVISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 82.2 bits (194), Expect = 5e-16
Identities = 33/77 (42%), Positives = 51/77 (66%)
Frame = +3
Query: 441 YGXYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAXGHYTEGAELVDS 620
YG +VPR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A GHYT G E++D+
Sbjct: 55 YGRHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDT 114
Query: 621 VLXVVRKXXXXCDCLXG 671
L +R+ C+ L G
Sbjct: 115 TLDRIRRLANNCEGLQG 131
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +2
Query: 278 REIVHIQAGQCGNHIGSXFWEIISDEHGIXPTG 376
RE++ I GQ G IG+ WE+ EHGI P G
Sbjct: 2 REVISIHVGQAGVQIGNACWELYCLEHGILPDG 34
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 81.8 bits (193), Expect = 6e-16
Identities = 34/76 (44%), Positives = 49/76 (64%)
Frame = +3
Query: 444 GXYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAXGHYTEGAELVDSV 623
G YVPR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A GHYT G EL+D+
Sbjct: 57 GRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTT 116
Query: 624 LXVVRKXXXXCDCLXG 671
L +R+ C L G
Sbjct: 117 LDRIRRLADNCSGLQG 132
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +2
Query: 278 REIVHIQAGQCGNHIGSXFWEIISDEHGIXPTGAYHGDSDLQLXRINVYYNE 433
RE++ I GQ G IG+ WE+ EHGI P G + + ++++
Sbjct: 2 REVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSD 53
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 81.8 bits (193), Expect = 6e-16
Identities = 34/76 (44%), Positives = 49/76 (64%)
Frame = +3
Query: 444 GXYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAXGHYTEGAELVDSV 623
G YVPR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A GHYT G EL+D+
Sbjct: 57 GRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTT 116
Query: 624 LXVVRKXXXXCDCLXG 671
L +R+ C L G
Sbjct: 117 LDRIRRLADNCSGLQG 132
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +2
Query: 278 REIVHIQAGQCGNHIGSXFWEIISDEHGIXPTGAYHGDSDLQLXRINVYYNE 433
RE++ I GQ G IG+ WE+ EHGI P G + + ++++
Sbjct: 2 REVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSD 53
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 78.6 bits (185), Expect = 6e-15
Identities = 32/76 (42%), Positives = 48/76 (63%)
Frame = +3
Query: 444 GXYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAXGHYTEGAELVDSV 623
G +VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A GHYT G E++D
Sbjct: 59 GRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLT 118
Query: 624 LXVVRKXXXXCDCLXG 671
L +R+ C L G
Sbjct: 119 LDRIRRLADNCTGLQG 134
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +2
Query: 278 REIVHIQAGQCGNHIGSXFWEIISDEHGIXPTGAYHGDSDL 400
RE++ I GQ G IG+ WE+ EHGI P G D L
Sbjct: 2 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSL 42
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 78.6 bits (185), Expect = 6e-15
Identities = 32/76 (42%), Positives = 48/76 (63%)
Frame = +3
Query: 444 GXYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAXGHYTEGAELVDSV 623
G +VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A GHYT G E++D
Sbjct: 58 GRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLT 117
Query: 624 LXVVRKXXXXCDCLXG 671
L +R+ C L G
Sbjct: 118 LDRIRRLADNCTGLQG 133
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +2
Query: 278 REIVHIQAGQCGNHIGSXFWEIISDEHGIXPTGAYHGDSDL 400
RE++ I GQ G IG+ WE+ EHGI P G D L
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSL 41
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 78.6 bits (185), Expect = 6e-15
Identities = 32/76 (42%), Positives = 48/76 (63%)
Frame = +3
Query: 444 GXYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAXGHYTEGAELVDSV 623
G +VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A GHYT G E++D
Sbjct: 59 GRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLT 118
Query: 624 LXVVRKXXXXCDCLXG 671
L +R+ C L G
Sbjct: 119 LDRIRRLADNCTGLQG 134
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +2
Query: 278 REIVHIQAGQCGNHIGSXFWEIISDEHGIXPTGAYHGDSDL 400
RE++ I GQ G IG+ WE+ EHGI P G D L
Sbjct: 2 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSL 42
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 78.6 bits (185), Expect = 6e-15
Identities = 32/76 (42%), Positives = 48/76 (63%)
Frame = +3
Query: 444 GXYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAXGHYTEGAELVDSV 623
G +VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A GHYT G E++D
Sbjct: 59 GRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLT 118
Query: 624 LXVVRKXXXXCDCLXG 671
L +R+ C L G
Sbjct: 119 LDRIRRLADNCTGLQG 134
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +2
Query: 278 REIVHIQAGQCGNHIGSXFWEIISDEHGIXPTGAYHGDSDL 400
RE++ I GQ G IG+ WE+ EHGI P G D L
Sbjct: 2 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSL 42
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 78.2 bits (184), Expect = 7e-15
Identities = 34/76 (44%), Positives = 49/76 (64%)
Frame = +3
Query: 444 GXYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAXGHYTEGAELVDSV 623
G +VPRAI+VDLEP +D +R+G + +F P+ + G+ A NN+A GHYT G E++D V
Sbjct: 64 GKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVV 123
Query: 624 LXVVRKXXXXCDCLXG 671
+ VR+ C L G
Sbjct: 124 MDRVRRLVENCRGLQG 139
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 278 REIVHIQAGQCGNHIGSXFWEIISDEHGIXPTGAYHGDSDLQL--XRINVYYNE 433
RE++ I GQ G +G+ WE+ EHGI P G + + L + N +++E
Sbjct: 7 REVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSE 60
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 69.3 bits (162), Expect = 3e-12
Identities = 30/76 (39%), Positives = 46/76 (60%)
Frame = +3
Query: 444 GXYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAXGHYTEGAELVDSV 623
G +VPR + VDLEP +D VR+G + +F P+ + G+ A N +A G YT G E++D V
Sbjct: 65 GKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVV 124
Query: 624 LXVVRKXXXXCDCLXG 671
+ V++ C+ L G
Sbjct: 125 MDRVKRLAENCNGLQG 140
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +2
Query: 278 REIVHIQAGQCGNHIGSXFWEIISDEHGIXPTGAYHGDSDL---QLXRINVYYNEAS 439
RE++ I GQ G IG+ WE+ EHGI P G YH + D + IN ++ E +
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETA 63
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 69.3 bits (162), Expect = 3e-12
Identities = 30/76 (39%), Positives = 46/76 (60%)
Frame = +3
Query: 444 GXYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAXGHYTEGAELVDSV 623
G +VPR + VDLEP +D VR+G + +F P+ + G+ A N +A G YT G E++D V
Sbjct: 37 GKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVV 96
Query: 624 LXVVRKXXXXCDCLXG 671
+ V++ C+ L G
Sbjct: 97 MDRVKRLAENCNGLQG 112
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 58.0 bits (134), Expect = 8e-09
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Frame = +3
Query: 450 YVPRAILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAXGHYTEGAELVDS 620
YVPRA+LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ +
Sbjct: 61 YVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEK 119
Query: 621 VLXVVRKXXXXCDCLXG 671
++ ++ + + L G
Sbjct: 120 IMDIIIREAENTNNLDG 136
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 284 IVHIQAGQCGNHIGSXFWEIISDEHGIXPTGAYHGDSDLQLXRINVYY 427
++ + GQCGN + FW+ + DEHGI G + D+ + ++Y
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY 54
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 58.0 bits (134), Expect = 8e-09
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Frame = +3
Query: 450 YVPRAILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAXGHYTEGAELVDS 620
YVPRA+LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ +
Sbjct: 61 YVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEK 119
Query: 621 VLXVVRKXXXXCDCLXG 671
++ ++ + + L G
Sbjct: 120 IMDIIIREAENTNNLDG 136
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 284 IVHIQAGQCGNHIGSXFWEIISDEHGIXPTGAYHGDSDLQLXRINVYY 427
++ + GQCGN + FW+ + DEHGI G + D+ + ++Y
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY 54
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 28.3 bits (60), Expect = 7.8
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = -2
Query: 637 RTTXKTESTSSAPSV*CPXAQLL-----PAPDCPKTKLSGRKICPKGPERTESMVPGSKS 473
R + + S SS+PS CP LL PAP P + G PK + PG+
Sbjct: 301 RISLASTSASSSPSDPCPSPPLLPPVCPPAPPPPPPPIGGLTSPPKDALKNVPEPPGNMK 360
Query: 472 T 470
T
Sbjct: 361 T 361
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,435,262
Number of Sequences: 27780
Number of extensions: 205554
Number of successful extensions: 431
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 429
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -