Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_J18
         (876 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC068503-1|AAH68503.1|  774|Homo sapiens LOC81691 protein protein.     31   7.2  
BC007646-1|AAH07646.1|  774|Homo sapiens exonuclease NEF-sp prot...    31   7.2  
AK057254-1|BAB71397.1|  443|Homo sapiens protein ( Homo sapiens ...    31   7.2  
AF332193-1|AAK17192.1|  774|Homo sapiens exonuclease NEF-sp prot...    31   7.2  

>BC068503-1|AAH68503.1|  774|Homo sapiens LOC81691 protein protein.
          Length = 774

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 12/44 (27%), Positives = 19/44 (43%)
 Frame = +2

Query: 524 PRWYVLEKCGKITQTTCLILEGVSVKHLENYYEDLTCLKTIFNH 655
           P W  L     +      +L+G+S  H   +Y +  CL+  F H
Sbjct: 83  PSWCQLFHQNHLNNVVVFVLQGMSQLHFYRFYLEFGCLRKAFRH 126


>BC007646-1|AAH07646.1|  774|Homo sapiens exonuclease NEF-sp
           protein.
          Length = 774

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 12/44 (27%), Positives = 19/44 (43%)
 Frame = +2

Query: 524 PRWYVLEKCGKITQTTCLILEGVSVKHLENYYEDLTCLKTIFNH 655
           P W  L     +      +L+G+S  H   +Y +  CL+  F H
Sbjct: 83  PSWCQLFHQNHLNNVVVFVLQGMSQLHFYRFYLEFGCLRKAFRH 126


>AK057254-1|BAB71397.1|  443|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32692 fis, clone TESTI2000238. ).
          Length = 443

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 12/44 (27%), Positives = 19/44 (43%)
 Frame = +2

Query: 524 PRWYVLEKCGKITQTTCLILEGVSVKHLENYYEDLTCLKTIFNH 655
           P W  L     +      +L+G+S  H   +Y +  CL+  F H
Sbjct: 83  PSWCQLFHQNHLNNVVVFVLQGMSQLHFYRFYLEFGCLRKAFRH 126


>AF332193-1|AAK17192.1|  774|Homo sapiens exonuclease NEF-sp
           protein.
          Length = 774

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 12/44 (27%), Positives = 19/44 (43%)
 Frame = +2

Query: 524 PRWYVLEKCGKITQTTCLILEGVSVKHLENYYEDLTCLKTIFNH 655
           P W  L     +      +L+G+S  H   +Y +  CL+  F H
Sbjct: 83  PSWCQLFHQNHLNNVVVFVLQGMSQLHFYRFYLEFGCLRKAFRH 126


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,391,090
Number of Sequences: 237096
Number of extensions: 1962507
Number of successful extensions: 3183
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3182
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)