Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_J11
         (875 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase w...    33   1.0  
X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2 pr...    33   1.0  
AK092711-1|BAC03955.1|  149|Homo sapiens protein ( Homo sapiens ...    31   5.5  
AF137396-7|AAG41681.1|  326|Homo sapiens HOR5'Beta7 protein.           31   5.5  

>Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase with
           SH3 domain, leucine zipper domain and proline rich
           protein.
          Length = 953

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 30/120 (25%), Positives = 48/120 (40%), Gaps = 1/120 (0%)
 Frame = -1

Query: 848 GLTQDDSTG*GAAVGLNGGFVHTAQL-GANDLHRTEIPTA*AMRKRHASRREKGGQVSGK 672
           G +   S+G G+     GG     +L G     RT  P++   ++R        G   G 
Sbjct: 524 GSSSGSSSG-GSGTWSRGGPPKKEELVGGKKKGRTWGPSSTLQKERVGGEERLKGLGEGS 582

Query: 671 RQGRNRRAQRGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSWP 492
           +Q  +     G     TP    +  GFA+ +   +F +A  GG +   +P + P Y S P
Sbjct: 583 KQWSSSAPNLGKSPKHTP----IAPGFASLNEMEEFAEAEDGGSSVPPSPYSTPSYLSVP 638


>X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2
           protein.
          Length = 954

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 30/120 (25%), Positives = 48/120 (40%), Gaps = 1/120 (0%)
 Frame = -1

Query: 848 GLTQDDSTG*GAAVGLNGGFVHTAQL-GANDLHRTEIPTA*AMRKRHASRREKGGQVSGK 672
           G +   S+G G+     GG     +L G     RT  P++   ++R        G   G 
Sbjct: 525 GSSSGSSSG-GSGTWSRGGPPKKEELVGGKKKGRTWGPSSTLQKERVGGEERLKGLGEGS 583

Query: 671 RQGRNRRAQRGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSWP 492
           +Q  +     G     TP    +  GFA+ +   +F +A  GG +   +P + P Y S P
Sbjct: 584 KQWSSSAPNLGKSPKHTP----IAPGFASLNEMEEFAEAEDGGSSVPPSPYSTPSYLSVP 639


>AK092711-1|BAC03955.1|  149|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35392 fis, clone SKNSH2000716. ).
          Length = 149

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 20/39 (51%), Positives = 20/39 (51%)
 Frame = -1

Query: 554 RQGGGAYGKTPATRPFYGSWPFAGLLLTCSFLRYPPDSV 438
           RQ  G  G   A R F  S P  GLL  CS LR  PDSV
Sbjct: 69  RQHFGIPGYPEAARDFSSS-PAPGLLTLCSRLRAKPDSV 106


>AF137396-7|AAG41681.1|  326|Homo sapiens HOR5'Beta7 protein.
          Length = 326

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 15/27 (55%), Positives = 17/27 (62%)
 Frame = +3

Query: 648 RSPVPTLPLTGYLSAFLPSGSVALSHS 728
           R PV T+P+   L AF   GSV LSHS
Sbjct: 163 RGPVATIPIVLLLKAFPYCGSVVLSHS 189


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,000,362
Number of Sequences: 237096
Number of extensions: 2906558
Number of successful extensions: 13254
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13243
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)