Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_J07
         (879 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58761-6|AAB00716.1|  312|Caenorhabditis elegans Hypothetical pr...   171   4e-43
U22832-3|AAA64508.2|  359|Caenorhabditis elegans Hypothetical pr...    31   0.82 
L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical pr...    31   1.4  
Z32683-2|CAA83619.1|  226|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z78015-4|CAB01436.2|  149|Caenorhabditis elegans Hypothetical pr...    29   3.3  
U61958-3|AAB03180.2|  149|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AF098987-4|AAC67429.1|  496|Caenorhabditis elegans Hypothetical ...    29   3.3  
Z81526-5|CAB04262.1|  983|Caenorhabditis elegans Hypothetical pr...    29   4.4  
U40802-5|AAK19011.2|  339|Caenorhabditis elegans Hypothetical pr...    29   5.8  
AL021470-3|CAA16291.2|  414|Caenorhabditis elegans Hypothetical ...    28   7.7  

>U58761-6|AAB00716.1|  312|Caenorhabditis elegans Hypothetical
           protein C01F1.2 protein.
          Length = 312

 Score =  171 bits (417), Expect = 4e-43
 Identities = 73/152 (48%), Positives = 108/152 (71%)
 Frame = +1

Query: 289 WKSMAATVVVGGGLTAFMMYVKKEKQEALDRERKKQLGKAKIGGSFELVNSEGKLVKSAD 468
           WK++  T  VGG   A + Y+KK + +  ++ RK+  GKA+IGG +EL+N++GK+  S +
Sbjct: 96  WKTVLGTFAVGGTCLAALFYIKKIRLDEREKHRKQTAGKARIGGEWELMNTDGKMEGSQE 155

Query: 469 FLGKWMLIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSPPLQPVFISVDPQRDTPELVG 648
             G W+L+YFGFT+CPDICPDE+EK+ +VV++ +    + P+ PVFISVDP+RD+   V 
Sbjct: 156 LRGNWLLMYFGFTNCPDICPDEIEKMVKVVEIIEAKKDATPIVPVFISVDPERDSVARVK 215

Query: 649 KYCKEFTPRLLGLTGTKEQVQQACKSYRVYFS 744
           +YC EF+ +L G TGT EQV +  K++RVY S
Sbjct: 216 EYCSEFSNKLRGFTGTTEQVNKVAKTFRVYHS 247



 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 25/54 (46%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
 Frame = +2

Query: 710 SKLASLIECTSVAGPQD--VDNDYIVDHTIIVYLVNPDGEFVDYYGQNRNAKXL 865
           +K+A         GP+    ++DYIVDHT+I+YL++P G+F DYYGQNR A+ +
Sbjct: 236 NKVAKTFRVYHSQGPRTNKQEDDYIVDHTVIMYLIDPSGQFHDYYGQNRKAEEI 289


>U22832-3|AAA64508.2|  359|Caenorhabditis elegans Hypothetical
           protein C09F5.3 protein.
          Length = 359

 Score = 31.5 bits (68), Expect = 0.82
 Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
 Frame = +1

Query: 487 LIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSPPLQPVFISVDPQRDTPELVGKYCKEF 666
           LI +G   C    P +L  +  V   HD+    PP  P+     P + TP+     C   
Sbjct: 235 LIMYGCALCATSYPSQLHLITHVQMSHDQETFYPPSLPIPTPPSP-KSTPKQRVLQCSVC 293

Query: 667 TPRLLGLTGTKE-QVQQACK 723
              +LG  G  E ++++ CK
Sbjct: 294 DESVLGEDGLDEHRLRKHCK 313


>L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical
           protein F44E2.4 protein.
          Length = 1283

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 15/57 (26%), Positives = 27/57 (47%)
 Frame = +1

Query: 583 SPPLQPVFISVDPQRDTPELVGKYCKEFTPRLLGLTGTKEQVQQACKSYRVYFSCRA 753
           +PP+     S++ Q+   E V K    F P  L +      + QAC+++  + +C A
Sbjct: 645 TPPVASSKCSIEDQKKFEECV-KPLTSFQPHPLSVIAIPRDIDQACEAFHTFKACSA 700


>Z32683-2|CAA83619.1|  226|Caenorhabditis elegans Hypothetical
           protein R07E5.2 protein.
          Length = 226

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 10/36 (27%), Positives = 22/36 (61%)
 Frame = +1

Query: 430 LVNSEGKLVKSADFLGKWMLIYFGFTHCPDICPDEL 537
           +V+ + K++   D+ GKW++++F       +CP E+
Sbjct: 47  VVDGDFKVISDQDYKGKWLVMFFYPLDFTFVCPTEI 82


>Z78015-4|CAB01436.2|  149|Caenorhabditis elegans Hypothetical
           protein R02D5.7 protein.
          Length = 149

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +1

Query: 499 GFTHCPDICPDELEKLAEVVD 561
           G+ +C D+ PD+L+K+AE  D
Sbjct: 126 GYENCQDMTPDQLKKIAEQAD 146


>U61958-3|AAB03180.2|  149|Caenorhabditis elegans Hypothetical
           protein C25A8.2 protein.
          Length = 149

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +1

Query: 499 GFTHCPDICPDELEKLAEVVD 561
           G+ +C D+ PD+L+K+AE  D
Sbjct: 126 GYENCQDMTPDQLKKIAEQAD 146


>AF098987-4|AAC67429.1|  496|Caenorhabditis elegans Hypothetical
           protein F40H3.1a protein.
          Length = 496

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
 Frame = -2

Query: 440 EFTSSKLPPIFAFPSCFFL-SRSSASCFSFL---TYIIKAVKPPPTTTVAA 300
           E T  +LP +  F +C F+ S+SSA C + L   TYI     PP + T +A
Sbjct: 165 ESTPKELPTVTKFTNCTFIRSQSSARCKAILPDTTYI--CTLPPVSATFSA 213


>Z81526-5|CAB04262.1|  983|Caenorhabditis elegans Hypothetical
           protein F33H2.1 protein.
          Length = 983

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = -2

Query: 617 STDMKTGCKGGDDGVLSCKSTTSANFSNS 531
           ST+ KT  +GG DGV +C + +SAN   S
Sbjct: 477 STEAKTPARGGQDGVKTC-TISSANLFTS 504


>U40802-5|AAK19011.2|  339|Caenorhabditis elegans Hypothetical
           protein ZC477.5 protein.
          Length = 339

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +1

Query: 487 LIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSPPLQPV 603
           L+ +G  +CP +  + L+K   V + H      PP QP+
Sbjct: 280 LLAYGRQNCPGVIEEILKKPVHVPNDHSTQQPQPPEQPI 318


>AL021470-3|CAA16291.2|  414|Caenorhabditis elegans Hypothetical
           protein Y17D7A.1 protein.
          Length = 414

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 20/59 (33%), Positives = 25/59 (42%)
 Frame = +1

Query: 427 ELVNSEGKLVKSADFLGKWMLIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSPPLQPV 603
           E+V  E  L+   D L K   I    +  P      L+KLAE +   D    S P QPV
Sbjct: 127 EVVRCEKDLIDCTDLLRKAGRILKEGSESPLYTKSNLQKLAEALQKIDICHDSSPSQPV 185


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,950,183
Number of Sequences: 27780
Number of extensions: 408765
Number of successful extensions: 1221
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1221
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)