Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_J04
         (981 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            29   0.16 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    29   0.16 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   0.22 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   3.5  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    25   4.6  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    25   4.6  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          24   6.0  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 29.5 bits (63), Expect = 0.16
 Identities = 14/41 (34%), Positives = 14/41 (34%)
 Frame = +2

Query: 680 PPPPPPXXWGXXPXXXXPXXSTPGXPPRRPNXXAXXGXXXP 802
           PPPPPP      P    P     G  P  PN     G   P
Sbjct: 585 PPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPP 625


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 29.5 bits (63), Expect = 0.16
 Identities = 14/40 (35%), Positives = 16/40 (40%)
 Frame = -1

Query: 759 GGSPGVEXXGXWXXGXXPQXXGGGGGGXTPXXRGRAXGSG 640
           GG  G    G    G      G GGGG     RG + G+G
Sbjct: 817 GGGAGASGGGFLITGDPSDTIGAGGGGAGGPLRGSSGGAG 856



 Score = 28.3 bits (60), Expect = 0.37
 Identities = 20/46 (43%), Positives = 21/46 (45%)
 Frame = -1

Query: 759 GGSPGVEXXGXWXXGXXPQXXGGGGGGXTPXXRGRAXGSGXLAVGS 622
           GGS G E  G    G      GGGGGG      GRA G G  A G+
Sbjct: 540 GGSDGPEYEGAGRGGVGSGIGGGGGGG----GGGRA-GGGVGATGA 580



 Score = 25.8 bits (54), Expect = 2.0
 Identities = 15/41 (36%), Positives = 18/41 (43%)
 Frame = -1

Query: 696 GGGGGGXTPXXRGRAXGSGXLAVGSRPPXXKXXSXXRGGGG 574
           GGGGGG       R  G+G +A G      +     RGG G
Sbjct: 517 GGGGGGSGCVNGSRTVGAGGMA-GGGSDGPEYEGAGRGGVG 556


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.0 bits (52), Expect(2) = 0.22
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = -1

Query: 759 GGSPGVEXXGXWXXGXXPQXXGGGGGG 679
           GGS G    G       P   GGGGGG
Sbjct: 205 GGSGGGAPGGGGGSSGGPGPGGGGGGG 231



 Score = 25.0 bits (52), Expect = 3.5
 Identities = 15/38 (39%), Positives = 16/38 (42%)
 Frame = -1

Query: 768 GRRGGSPGVEXXGXWXXGXXPQXXGGGGGGXTPXXRGR 655
           G  GG+PG    G    G      GGGGGG     R R
Sbjct: 206 GSGGGAPG---GGGGSSGGPGPGGGGGGGGRDRDHRDR 240



 Score = 24.6 bits (51), Expect = 4.6
 Identities = 16/49 (32%), Positives = 18/49 (36%), Gaps = 4/49 (8%)
 Frame = -1

Query: 708 PQXXGGGGGGXTPXXRGRAXG----SGXLAVGSRPPXXKXXSXXRGGGG 574
           P   GGG GG  P   G + G     G    G R    +     R GGG
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGG 248



 Score = 22.2 bits (45), Expect(2) = 0.22
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = -1

Query: 696 GGGGGGXTPXXRGRAXGS 643
           GGGGGG     RG A  S
Sbjct: 251 GGGGGGMQLDGRGNAIPS 268


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.0 bits (52), Expect = 3.5
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +3

Query: 435 PRXEKNXGGAPPPRQXTP 488
           P    N GG PPP   TP
Sbjct: 334 PSGNDNMGGGPPPSSATP 351



 Score = 24.6 bits (51), Expect = 4.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 757 PPXXQPPRPXXGPXP 801
           PP  +PP P  GP P
Sbjct: 263 PPPIRPPNPMGGPRP 277


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 24.6 bits (51), Expect = 4.6
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +2

Query: 881 PXAGERHXLRTPPGRR 928
           P A ERH  R PP RR
Sbjct: 327 PGAAERHRRRRPPPRR 342


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 24.6 bits (51), Expect = 4.6
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = -1

Query: 693 GGGGGXTPXXRGRAXGSGXLAVGSRPPXXKXXSXXRGGGG 574
           GGGG  TP   G    +   A G++ P  +  S     GG
Sbjct: 399 GGGGSNTPSNHGALGNTQNNAGGNQTPFGQIKSESNPLGG 438


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 24.2 bits (50), Expect = 6.0
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = -1

Query: 708 PQXXGGGGGGXTPXXRGRAXGSG 640
           P   GGGGGG      G   GSG
Sbjct: 543 PAGVGGGGGGGGGGGGGGVIGSG 565


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 650,890
Number of Sequences: 2352
Number of extensions: 10101
Number of successful extensions: 50
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 107296839
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)