Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_J03
(876 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC070378-1|AAH70378.1| 158|Homo sapiens basic transcription fac... 169 9e-42
BC022371-1|AAH22371.1| 158|Homo sapiens BTF3L4 protein protein. 169 9e-42
AL445685-6|CAI17032.1| 158|Homo sapiens basic transcription fac... 169 9e-42
AL139156-5|CAI22856.1| 158|Homo sapiens basic transcription fac... 169 9e-42
AK027750-1|BAB55342.1| 158|Homo sapiens protein ( Homo sapiens ... 169 9e-42
X74070-1|CAA52200.1| 162|Homo sapiens transcription factor BTF3... 161 3e-39
X53281-1|CAA37376.1| 162|Homo sapiens general transcription fac... 161 3e-39
X53280-1|CAA37375.1| 206|Homo sapiens general transcription fac... 161 3e-39
BT007120-1|AAP35784.1| 162|Homo sapiens basic transcription fac... 161 3e-39
BC008062-1|AAH08062.1| 162|Homo sapiens basic transcription fac... 161 3e-39
AB062126-1|BAB93458.1| 162|Homo sapiens transcription factor BT... 161 3e-39
BC021004-1|AAH21004.1| 153|Homo sapiens BTF3L4 protein protein. 151 2e-36
M90356-1|AAA58401.1| 214|Homo sapiens BTF3 homologue protein. 134 5e-31
M90357-1|AAA58398.1| 158|Homo sapiens basic transcription facto... 99 3e-21
BC062736-1|AAH62736.1| 102|Homo sapiens LOC503543 protein protein. 96 2e-19
M90354-1|AAA58400.1| 111|Homo sapiens BTF3 homologue protein. 95 3e-19
X82834-1|CAA58041.1| 2185|Homo sapiens 256 kD golgin protein. 31 5.5
U41740-1|AAC50434.1| 2230|Homo sapiens trans-Golgi p230 protein. 31 5.5
BC050444-1|AAH50444.1| 166|Homo sapiens GOLGA4 protein protein. 31 5.5
AB209693-1|BAD92930.1| 1310|Homo sapiens golgi autoantigen, golg... 31 5.5
AB023201-1|BAA76828.1| 728|Homo sapiens KIAA0984 protein protein. 31 7.2
>BC070378-1|AAH70378.1| 158|Homo sapiens basic transcription factor
3-like 4 protein.
Length = 158
Score = 169 bits (412), Expect = 9e-42
Identities = 93/157 (59%), Positives = 104/157 (66%), Gaps = 10/157 (6%)
Frame = +2
Query: 212 MHSAXXKXLQSQVRIGGKGTPSRKQQVVHVTAATXXXXXXXXXXXXXVNTIPGIEXVNMI 391
M+ LQ+QVRIGGKGT RK++VVH TA VN I GIE VNMI
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60
Query: 392 KEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIASSV 571
K+DGTVIHFNNPK QASL+ANTFAITGH E K TEMLPGILSQLG D L L+++A
Sbjct: 61 KDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQF 120
Query: 572 -------AAPKPL---EEDDEVPNLVGNFDEASKQEA 652
APKP EEDD+VP+LV NFDEASK EA
Sbjct: 121 PRQVLDSKAPKPEDIDEEDDDVPDLVENFDEASKNEA 157
>BC022371-1|AAH22371.1| 158|Homo sapiens BTF3L4 protein protein.
Length = 158
Score = 169 bits (412), Expect = 9e-42
Identities = 93/157 (59%), Positives = 104/157 (66%), Gaps = 10/157 (6%)
Frame = +2
Query: 212 MHSAXXKXLQSQVRIGGKGTPSRKQQVVHVTAATXXXXXXXXXXXXXVNTIPGIEXVNMI 391
M+ LQ+QVRIGGKGT RK++VVH TA VN I GIE VNMI
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60
Query: 392 KEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIASSV 571
K+DGTVIHFNNPK QASL+ANTFAITGH E K TEMLPGILSQLG D L L+++A
Sbjct: 61 KDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQF 120
Query: 572 -------AAPKPL---EEDDEVPNLVGNFDEASKQEA 652
APKP EEDD+VP+LV NFDEASK EA
Sbjct: 121 PRQVLDSKAPKPEDIDEEDDDVPDLVENFDEASKNEA 157
>AL445685-6|CAI17032.1| 158|Homo sapiens basic transcription factor
3-like 4 protein.
Length = 158
Score = 169 bits (412), Expect = 9e-42
Identities = 93/157 (59%), Positives = 104/157 (66%), Gaps = 10/157 (6%)
Frame = +2
Query: 212 MHSAXXKXLQSQVRIGGKGTPSRKQQVVHVTAATXXXXXXXXXXXXXVNTIPGIEXVNMI 391
M+ LQ+QVRIGGKGT RK++VVH TA VN I GIE VNMI
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60
Query: 392 KEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIASSV 571
K+DGTVIHFNNPK QASL+ANTFAITGH E K TEMLPGILSQLG D L L+++A
Sbjct: 61 KDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQF 120
Query: 572 -------AAPKPL---EEDDEVPNLVGNFDEASKQEA 652
APKP EEDD+VP+LV NFDEASK EA
Sbjct: 121 PRQVLDSKAPKPEDIDEEDDDVPDLVENFDEASKNEA 157
>AL139156-5|CAI22856.1| 158|Homo sapiens basic transcription factor
3-like 4 protein.
Length = 158
Score = 169 bits (412), Expect = 9e-42
Identities = 93/157 (59%), Positives = 104/157 (66%), Gaps = 10/157 (6%)
Frame = +2
Query: 212 MHSAXXKXLQSQVRIGGKGTPSRKQQVVHVTAATXXXXXXXXXXXXXVNTIPGIEXVNMI 391
M+ LQ+QVRIGGKGT RK++VVH TA VN I GIE VNMI
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60
Query: 392 KEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIASSV 571
K+DGTVIHFNNPK QASL+ANTFAITGH E K TEMLPGILSQLG D L L+++A
Sbjct: 61 KDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQF 120
Query: 572 -------AAPKPL---EEDDEVPNLVGNFDEASKQEA 652
APKP EEDD+VP+LV NFDEASK EA
Sbjct: 121 PRQVLDSKAPKPEDIDEEDDDVPDLVENFDEASKNEA 157
>AK027750-1|BAB55342.1| 158|Homo sapiens protein ( Homo sapiens
cDNA FLJ14844 fis, clone PLACE1000133, highly similar to
TRANSCRIPTION FACTOR BTF3. ).
Length = 158
Score = 169 bits (412), Expect = 9e-42
Identities = 93/157 (59%), Positives = 104/157 (66%), Gaps = 10/157 (6%)
Frame = +2
Query: 212 MHSAXXKXLQSQVRIGGKGTPSRKQQVVHVTAATXXXXXXXXXXXXXVNTIPGIEXVNMI 391
M+ LQ+QVRIGGKGT RK++VVH TA VN I GIE VNMI
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60
Query: 392 KEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIASSV 571
K+DGTVIHFNNPK QASL+ANTFAITGH E K TEMLPGILSQLG D L L+++A
Sbjct: 61 KDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQF 120
Query: 572 -------AAPKPL---EEDDEVPNLVGNFDEASKQEA 652
APKP EEDD+VP+LV NFDEASK EA
Sbjct: 121 PRQVLDSKAPKPEDIDEEDDDVPDLVENFDEASKNEA 157
>X74070-1|CAA52200.1| 162|Homo sapiens transcription factor BTF3
protein.
Length = 162
Score = 161 bits (391), Expect = 3e-39
Identities = 89/156 (57%), Positives = 99/156 (63%), Gaps = 9/156 (5%)
Frame = +2
Query: 212 MHSAXXKXLQSQVRIGGKGTPSRKQQVVHVTAATXXXXXXXXXXXXXVNTIPGIEXVNMI 391
M+ LQ+QVRIGGKGT RK++VVH TA VN I GIE VNM
Sbjct: 6 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMF 65
Query: 392 KEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIA--- 562
GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L+R+A
Sbjct: 66 TNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEAL 125
Query: 563 --SSVAAPKPL----EEDDEVPNLVGNFDEASKQEA 652
SV PL ++DDEVP+LV NFDEASK EA
Sbjct: 126 PKQSVDGKAPLATGEDDDDEVPDLVENFDEASKNEA 161
>X53281-1|CAA37376.1| 162|Homo sapiens general transcription factor
protein.
Length = 162
Score = 161 bits (391), Expect = 3e-39
Identities = 89/156 (57%), Positives = 99/156 (63%), Gaps = 9/156 (5%)
Frame = +2
Query: 212 MHSAXXKXLQSQVRIGGKGTPSRKQQVVHVTAATXXXXXXXXXXXXXVNTIPGIEXVNMI 391
M+ LQ+QVRIGGKGT RK++VVH TA VN I GIE VNM
Sbjct: 6 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMF 65
Query: 392 KEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIA--- 562
GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L+R+A
Sbjct: 66 TNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEAL 125
Query: 563 --SSVAAPKPL----EEDDEVPNLVGNFDEASKQEA 652
SV PL ++DDEVP+LV NFDEASK EA
Sbjct: 126 PKQSVDGKAPLATGEDDDDEVPDLVENFDEASKNEA 161
>X53280-1|CAA37375.1| 206|Homo sapiens general transcription factor
protein.
Length = 206
Score = 161 bits (391), Expect = 3e-39
Identities = 89/156 (57%), Positives = 99/156 (63%), Gaps = 9/156 (5%)
Frame = +2
Query: 212 MHSAXXKXLQSQVRIGGKGTPSRKQQVVHVTAATXXXXXXXXXXXXXVNTIPGIEXVNMI 391
M+ LQ+QVRIGGKGT RK++VVH TA VN I GIE VNM
Sbjct: 50 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMF 109
Query: 392 KEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIA--- 562
GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L+R+A
Sbjct: 110 TNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEAL 169
Query: 563 --SSVAAPKPL----EEDDEVPNLVGNFDEASKQEA 652
SV PL ++DDEVP+LV NFDEASK EA
Sbjct: 170 PKQSVDGKAPLATGEDDDDEVPDLVENFDEASKNEA 205
>BT007120-1|AAP35784.1| 162|Homo sapiens basic transcription factor
3 protein.
Length = 162
Score = 161 bits (391), Expect = 3e-39
Identities = 89/156 (57%), Positives = 99/156 (63%), Gaps = 9/156 (5%)
Frame = +2
Query: 212 MHSAXXKXLQSQVRIGGKGTPSRKQQVVHVTAATXXXXXXXXXXXXXVNTIPGIEXVNMI 391
M+ LQ+QVRIGGKGT RK++VVH TA VN I GIE VNM
Sbjct: 6 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMF 65
Query: 392 KEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIA--- 562
GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L+R+A
Sbjct: 66 TNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEAL 125
Query: 563 --SSVAAPKPL----EEDDEVPNLVGNFDEASKQEA 652
SV PL ++DDEVP+LV NFDEASK EA
Sbjct: 126 PKQSVDGKAPLATGEDDDDEVPDLVENFDEASKNEA 161
>BC008062-1|AAH08062.1| 162|Homo sapiens basic transcription factor
3 protein.
Length = 162
Score = 161 bits (391), Expect = 3e-39
Identities = 89/156 (57%), Positives = 99/156 (63%), Gaps = 9/156 (5%)
Frame = +2
Query: 212 MHSAXXKXLQSQVRIGGKGTPSRKQQVVHVTAATXXXXXXXXXXXXXVNTIPGIEXVNMI 391
M+ LQ+QVRIGGKGT RK++VVH TA VN I GIE VNM
Sbjct: 6 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMF 65
Query: 392 KEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIA--- 562
GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L+R+A
Sbjct: 66 TNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEAL 125
Query: 563 --SSVAAPKPL----EEDDEVPNLVGNFDEASKQEA 652
SV PL ++DDEVP+LV NFDEASK EA
Sbjct: 126 PKQSVDGKAPLATGEDDDDEVPDLVENFDEASKNEA 161
>AB062126-1|BAB93458.1| 162|Homo sapiens transcription factor BTF 3
protein.
Length = 162
Score = 161 bits (391), Expect = 3e-39
Identities = 89/156 (57%), Positives = 99/156 (63%), Gaps = 9/156 (5%)
Frame = +2
Query: 212 MHSAXXKXLQSQVRIGGKGTPSRKQQVVHVTAATXXXXXXXXXXXXXVNTIPGIEXVNMI 391
M+ LQ+QVRIGGKGT RK++VVH TA VN I GIE VNM
Sbjct: 6 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMF 65
Query: 392 KEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIA--- 562
GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L+R+A
Sbjct: 66 TNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEAL 125
Query: 563 --SSVAAPKPL----EEDDEVPNLVGNFDEASKQEA 652
SV PL ++DDEVP+LV NFDEASK EA
Sbjct: 126 PKQSVDGKAPLATGEDDDDEVPDLVENFDEASKNEA 161
>BC021004-1|AAH21004.1| 153|Homo sapiens BTF3L4 protein protein.
Length = 153
Score = 151 bits (367), Expect = 2e-36
Identities = 83/140 (59%), Positives = 93/140 (66%), Gaps = 10/140 (7%)
Frame = +2
Query: 263 KGTPSRKQQVVHVTAATXXXXXXXXXXXXXVNTIPGIEXVNMIKEDGTVIHFNNPKAQAS 442
+GT RK++VVH TA VN I GIE VNMIK+DGTVIHFNNPK QAS
Sbjct: 13 QGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQAS 72
Query: 443 LAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIASSV-------AAPKPL---E 592
L+ANTFAITGH E K TEMLPGILSQLG D L L+++A APKP E
Sbjct: 73 LSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKAPKPEDIDE 132
Query: 593 EDDEVPNLVGNFDEASKQEA 652
EDD+VP+LV NFDEASK EA
Sbjct: 133 EDDDVPDLVENFDEASKNEA 152
>M90356-1|AAA58401.1| 214|Homo sapiens BTF3 homologue protein.
Length = 214
Score = 134 bits (323), Expect = 5e-31
Identities = 72/133 (54%), Positives = 82/133 (61%)
Frame = +2
Query: 236 LQSQVRIGGKGTPSRKQQVVHVTAATXXXXXXXXXXXXXVNTIPGIEXVNMIKEDGTVIH 415
LQ+QVRIGGKGT RK++V H TA VN I GIE VNM GTVIH
Sbjct: 44 LQAQVRIGGKGTAHRKKKVFHRTATADDKKLQFSLKKLQVNNISGIEKVNMFTNQGTVIH 103
Query: 416 FNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIASSVAAPKPLEE 595
FNNPK QASLA NTF ITGH E KQ TEMLP +LSQLG D L L+R+A V +P+
Sbjct: 104 FNNPKFQASLAVNTFTITGHAEAKQVTEMLPSVLSQLGADSLTSLRRLA-EVLPKQPV-- 160
Query: 596 DDEVPNLVGNFDE 634
D + P G D+
Sbjct: 161 DGKAPLATGGDDD 173
>M90357-1|AAA58398.1| 158|Homo sapiens basic transcription factor
3a protein.
Length = 158
Score = 99 bits (238), Expect(2) = 3e-21
Identities = 56/94 (59%), Positives = 61/94 (64%), Gaps = 9/94 (9%)
Frame = +2
Query: 380 VNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRI 559
VNM GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L+R+
Sbjct: 68 VNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRRL 127
Query: 560 A-----SSVAAPKPL----EEDDEVPNLVGNFDE 634
A SV PL ++DDEVP G F E
Sbjct: 128 AEALPKQSVDGKAPLATGEDDDDEVP---GGFQE 158
Score = 22.6 bits (46), Expect(2) = 3e-21
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 212 MHSAXXKXLQSQVRIGGK 265
M+ LQ+QVRIGGK
Sbjct: 50 MNQEKLAKLQAQVRIGGK 67
>BC062736-1|AAH62736.1| 102|Homo sapiens LOC503543 protein protein.
Length = 102
Score = 95.9 bits (228), Expect = 2e-19
Identities = 53/101 (52%), Positives = 64/101 (63%), Gaps = 10/101 (9%)
Frame = +2
Query: 380 VNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRI 559
+N K T+IHFNNP+ QA LA NTF ITGHGE KQ TEML +L+QL L L+R+
Sbjct: 1 MNQEKLQRTMIHFNNPEVQAFLAVNTFTITGHGETKQLTEMLRSVLNQLAAVSLTSLRRL 60
Query: 560 A-----SSVAAPKPL-----EEDDEVPNLVGNFDEASKQEA 652
A SV PL ++DDEVP ++ NFDEASK EA
Sbjct: 61 AEALPKQSVDGKAPLATGEDDDDDEVPGIMENFDEASKNEA 101
>M90354-1|AAA58400.1| 111|Homo sapiens BTF3 homologue protein.
Length = 111
Score = 95.1 bits (226), Expect = 3e-19
Identities = 52/92 (56%), Positives = 57/92 (61%)
Frame = +2
Query: 239 QSQVRIGGKGTPSRKQQVVHVTAATXXXXXXXXXXXXXVNTIPGIEXVNMIKEDGTVIHF 418
Q++V G KGT RK+ VVH TA VN IPGIE VNM GTVIHF
Sbjct: 14 QAEVHTGRKGTAHRKK-VVHTTAEDKKFQFSLKKLG--VNNIPGIEEVNMFTHQGTVIHF 70
Query: 419 NNPKAQASLAANTFAITGHGENKQTTEMLPGI 514
NNP+ QASLAANTF +TGH E KQ TEML I
Sbjct: 71 NNPEVQASLAANTFTMTGHAETKQLTEMLLSI 102
>X82834-1|CAA58041.1| 2185|Homo sapiens 256 kD golgin protein.
Length = 2185
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 533 DGLNRLKRIASSVAAPKPLEEDDEVPNLVGNFDEASKQE 649
+ LNRL +S+ + P + D E +LVGN D +K++
Sbjct: 100 ESLNRLDLDSSTASFDPPSDMDSEAEDLVGNSDSLNKEQ 138
>U41740-1|AAC50434.1| 2230|Homo sapiens trans-Golgi p230 protein.
Length = 2230
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 533 DGLNRLKRIASSVAAPKPLEEDDEVPNLVGNFDEASKQE 649
+ LNRL +S+ + P + D E +LVGN D +K++
Sbjct: 100 ESLNRLDLDSSTASFDPPSDMDSEAEDLVGNSDSLNKEQ 138
>BC050444-1|AAH50444.1| 166|Homo sapiens GOLGA4 protein protein.
Length = 166
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 533 DGLNRLKRIASSVAAPKPLEEDDEVPNLVGNFDEASKQE 649
+ LNRL +S+ + P + D E +LVGN D +K++
Sbjct: 100 ESLNRLDLDSSTASFDPPSDMDSEAEDLVGNSDSLNKEQ 138
>AB209693-1|BAD92930.1| 1310|Homo sapiens golgi autoantigen, golgin
subfamily a, 4 variant protein.
Length = 1310
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 533 DGLNRLKRIASSVAAPKPLEEDDEVPNLVGNFDEASKQE 649
+ LNRL +S+ + P + D E +LVGN D +K++
Sbjct: 131 ESLNRLDLDSSTASFDPPSDMDSEAEDLVGNSDSLNKEQ 169
>AB023201-1|BAA76828.1| 728|Homo sapiens KIAA0984 protein protein.
Length = 728
Score = 30.7 bits (66), Expect = 7.2
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 289 GCSRYCGHXXQKTAVIAQKVVSEHNSWHRXGKYDQ 393
GCS YCG ++ V+ ++V+ + W++ Y Q
Sbjct: 109 GCSSYCGQEAEQDRVVLKRVLLAYARWNKTVGYCQ 143
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,761,163
Number of Sequences: 237096
Number of extensions: 1818557
Number of successful extensions: 7763
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 7573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7741
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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