Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_J02
         (887 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   3.1  
AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...    25   3.1  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 14/41 (34%), Positives = 14/41 (34%)
 Frame = +2

Query: 308 PPPXXXXXPPXCLXIPXXTGGGGXXPPPXXXXXGGXXGPPV 430
           PPP     PP  L      G  G  PP       G   PPV
Sbjct: 586 PPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPPV 626



 Score = 24.2 bits (50), Expect = 5.4
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = -3

Query: 429 TGGPXXPPXXXXXGGGXXPPPP 364
           TGGP  PP     GG     PP
Sbjct: 524 TGGPLGPPPPPPPGGAVLNIPP 545


>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +1

Query: 553 IFPXGXPLXXXPXXGGDXTN 612
           IFP G PL      GGD TN
Sbjct: 118 IFPDGKPLNMILDDGGDLTN 137


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.315    0.152    0.558 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 396,842
Number of Sequences: 2352
Number of extensions: 7216
Number of successful extensions: 8
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95507181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)