Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_J02
(887 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 41 0.001
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 41 0.001
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 41 0.001
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 39 0.004
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 39 0.004
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 35 0.089
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 34 0.12
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 34 0.12
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 34 0.12
Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical pr... 34 0.16
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 34 0.16
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 34 0.16
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.48
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 32 0.48
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 32 0.48
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 32 0.48
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 32 0.63
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.1
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 30 2.5
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 3.4
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 29 4.4
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 29 4.4
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 29 4.4
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 29 4.4
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 29 4.4
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 5.9
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 5.9
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 5.9
U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 5.9
M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein ( C.ele... 29 5.9
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 29 5.9
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 28 7.8
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 7.8
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 28 7.8
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 40.7 bits (91), Expect = 0.001
Identities = 34/114 (29%), Positives = 35/114 (30%), Gaps = 2/114 (1%)
Frame = +2
Query: 197 PXXXXPPXPXXXKXXPPXGPKXKXPPFXXKKKXKSVXPPPXXXXXPPXCLXIPXXTGGGG 376
P PP P K PP PP PPP PP P GG
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPP----PPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 287
Query: 377 XXPPPXXXXXGGXXGPPVQAVTKXNTG--PXRNNTGXPXXPRGGXAPPXXXXQK 532
PPP G PP TG P G P P G +PP QK
Sbjct: 288 SPPPP----RAGSPPPPPPPRGSPPTGSLPPPQAGGSP-PPAGTGSPPPPPRQK 336
Score = 36.7 bits (81), Expect = 0.022
Identities = 26/89 (29%), Positives = 27/89 (30%)
Frame = +1
Query: 169 PXXXGXXXXPXXKXXPGPXXXKKXPPPGAXXKXPPXXPKKKXKKCXXPPXXXXXPPXVPX 348
P G P P P PPP A PP P+ PP PP
Sbjct: 266 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR------GSPPTGSLPPPQAGG 319
Query: 349 YPXPXXGGGXXTPPPXXXXGXXXRXPGPG 435
P P G G PPP R P G
Sbjct: 320 SP-PPAGTGSPPPPPRQKRQAPERSPPTG 347
Score = 33.5 bits (73), Expect = 0.21
Identities = 30/129 (23%), Positives = 35/129 (27%), Gaps = 7/129 (5%)
Frame = +1
Query: 232 KKXPPPGAXXKXPPXX--PKKKXKKCXXPPXXXXXPPXVPXYPXPXXGGGXXTPPPXXXX 405
++ PP G+ PP P PP PP P G PPP
Sbjct: 229 RQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS 288
Query: 406 GXXXR-----XPGPGXXKKXHGPXPXQHWXAXXPPGGXGPPXXXXPKRXXXXXXIFPXGX 570
R P P G P PP G G P ++ P G
Sbjct: 289 PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGS 348
Query: 571 PLXXXPXXG 597
P P G
Sbjct: 349 PPTGSPPTG 357
Score = 32.7 bits (71), Expect = 0.36
Identities = 31/113 (27%), Positives = 36/113 (31%), Gaps = 2/113 (1%)
Frame = +2
Query: 290 KXKSVXPPPXXXXXPPXCLXIPXXTGGGGXXPPPXXXXXGGXXGPPVQAVTKXNTG--PX 463
+ K PP PP P G G PPP G P + TG P
Sbjct: 226 RGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPP---AAGSPPPPRTGSPPPPPTGSPPP 282
Query: 464 RNNTGXPXXPRGGXAPPXXXXQKGVLXXPXSSLXXXXSXXSRXXGVTXQTXPP 622
G P PR G +PP +G P SL + S T PP
Sbjct: 283 PPAGGSPPPPRAG-SPPPPPPPRG--SPPTGSLPPPQAGGSPPPAGTGSPPPP 332
Score = 31.9 bits (69), Expect = 0.63
Identities = 29/102 (28%), Positives = 30/102 (29%)
Frame = +2
Query: 197 PXXXXPPXPXXXKXXPPXGPKXKXPPFXXKKKXKSVXPPPXXXXXPPXCLXIPXXTGGGG 376
P PP P PP PP PPP PP G G
Sbjct: 276 PTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPA-------GTGS 328
Query: 377 XXPPPXXXXXGGXXGPPVQAVTKXNTGPXRNNTGXPXXPRGG 502
PPP PP + TG TG P PRGG
Sbjct: 329 PPPPPRQKRQAPERSPPTGS---PPTGSP--PTGRP--PRGG 363
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 40.7 bits (91), Expect = 0.001
Identities = 34/114 (29%), Positives = 35/114 (30%), Gaps = 2/114 (1%)
Frame = +2
Query: 197 PXXXXPPXPXXXKXXPPXGPKXKXPPFXXKKKXKSVXPPPXXXXXPPXCLXIPXXTGGGG 376
P PP P K PP PP PPP PP P GG
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPP----PPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 308
Query: 377 XXPPPXXXXXGGXXGPPVQAVTKXNTG--PXRNNTGXPXXPRGGXAPPXXXXQK 532
PPP G PP TG P G P P G +PP QK
Sbjct: 309 SPPPP----RAGSPPPPPPPRGSPPTGSLPPPQAGGSP-PPAGTGSPPPPPRQK 357
Score = 36.7 bits (81), Expect = 0.022
Identities = 26/89 (29%), Positives = 27/89 (30%)
Frame = +1
Query: 169 PXXXGXXXXPXXKXXPGPXXXKKXPPPGAXXKXPPXXPKKKXKKCXXPPXXXXXPPXVPX 348
P G P P P PPP A PP P+ PP PP
Sbjct: 287 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR------GSPPTGSLPPPQAGG 340
Query: 349 YPXPXXGGGXXTPPPXXXXGXXXRXPGPG 435
P P G G PPP R P G
Sbjct: 341 SP-PPAGTGSPPPPPRQKRQAPERSPPTG 368
Score = 33.5 bits (73), Expect = 0.21
Identities = 30/129 (23%), Positives = 35/129 (27%), Gaps = 7/129 (5%)
Frame = +1
Query: 232 KKXPPPGAXXKXPPXX--PKKKXKKCXXPPXXXXXPPXVPXYPXPXXGGGXXTPPPXXXX 405
++ PP G+ PP P PP PP P G PPP
Sbjct: 250 RQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS 309
Query: 406 GXXXR-----XPGPGXXKKXHGPXPXQHWXAXXPPGGXGPPXXXXPKRXXXXXXIFPXGX 570
R P P G P PP G G P ++ P G
Sbjct: 310 PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGS 369
Query: 571 PLXXXPXXG 597
P P G
Sbjct: 370 PPTGSPPTG 378
Score = 32.7 bits (71), Expect = 0.36
Identities = 31/113 (27%), Positives = 36/113 (31%), Gaps = 2/113 (1%)
Frame = +2
Query: 290 KXKSVXPPPXXXXXPPXCLXIPXXTGGGGXXPPPXXXXXGGXXGPPVQAVTKXNTG--PX 463
+ K PP PP P G G PPP G P + TG P
Sbjct: 247 RGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPP---AAGSPPPPRTGSPPPPPTGSPPP 303
Query: 464 RNNTGXPXXPRGGXAPPXXXXQKGVLXXPXSSLXXXXSXXSRXXGVTXQTXPP 622
G P PR G +PP +G P SL + S T PP
Sbjct: 304 PPAGGSPPPPRAG-SPPPPPPPRG--SPPTGSLPPPQAGGSPPPAGTGSPPPP 353
Score = 31.9 bits (69), Expect = 0.63
Identities = 29/102 (28%), Positives = 30/102 (29%)
Frame = +2
Query: 197 PXXXXPPXPXXXKXXPPXGPKXKXPPFXXKKKXKSVXPPPXXXXXPPXCLXIPXXTGGGG 376
P PP P PP PP PPP PP G G
Sbjct: 297 PTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPA-------GTGS 349
Query: 377 XXPPPXXXXXGGXXGPPVQAVTKXNTGPXRNNTGXPXXPRGG 502
PPP PP + TG TG P PRGG
Sbjct: 350 PPPPPRQKRQAPERSPPTGS---PPTGSP--PTGRP--PRGG 384
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 40.7 bits (91), Expect = 0.001
Identities = 34/114 (29%), Positives = 35/114 (30%), Gaps = 2/114 (1%)
Frame = +2
Query: 197 PXXXXPPXPXXXKXXPPXGPKXKXPPFXXKKKXKSVXPPPXXXXXPPXCLXIPXXTGGGG 376
P PP P K PP PP PPP PP P GG
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPP----PPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 293
Query: 377 XXPPPXXXXXGGXXGPPVQAVTKXNTG--PXRNNTGXPXXPRGGXAPPXXXXQK 532
PPP G PP TG P G P P G +PP QK
Sbjct: 294 SPPPP----RAGSPPPPPPPRGSPPTGSLPPPQAGGSP-PPAGTGSPPPPPRQK 342
Score = 36.7 bits (81), Expect = 0.022
Identities = 26/89 (29%), Positives = 27/89 (30%)
Frame = +1
Query: 169 PXXXGXXXXPXXKXXPGPXXXKKXPPPGAXXKXPPXXPKKKXKKCXXPPXXXXXPPXVPX 348
P G P P P PPP A PP P+ PP PP
Sbjct: 272 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR------GSPPTGSLPPPQAGG 325
Query: 349 YPXPXXGGGXXTPPPXXXXGXXXRXPGPG 435
P P G G PPP R P G
Sbjct: 326 SP-PPAGTGSPPPPPRQKRQAPERSPPTG 353
Score = 33.5 bits (73), Expect = 0.21
Identities = 30/129 (23%), Positives = 35/129 (27%), Gaps = 7/129 (5%)
Frame = +1
Query: 232 KKXPPPGAXXKXPPXX--PKKKXKKCXXPPXXXXXPPXVPXYPXPXXGGGXXTPPPXXXX 405
++ PP G+ PP P PP PP P G PPP
Sbjct: 235 RQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS 294
Query: 406 GXXXR-----XPGPGXXKKXHGPXPXQHWXAXXPPGGXGPPXXXXPKRXXXXXXIFPXGX 570
R P P G P PP G G P ++ P G
Sbjct: 295 PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGS 354
Query: 571 PLXXXPXXG 597
P P G
Sbjct: 355 PPTGSPPTG 363
Score = 32.7 bits (71), Expect = 0.36
Identities = 31/113 (27%), Positives = 36/113 (31%), Gaps = 2/113 (1%)
Frame = +2
Query: 290 KXKSVXPPPXXXXXPPXCLXIPXXTGGGGXXPPPXXXXXGGXXGPPVQAVTKXNTG--PX 463
+ K PP PP P G G PPP G P + TG P
Sbjct: 232 RGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPP---AAGSPPPPRTGSPPPPPTGSPPP 288
Query: 464 RNNTGXPXXPRGGXAPPXXXXQKGVLXXPXSSLXXXXSXXSRXXGVTXQTXPP 622
G P PR G +PP +G P SL + S T PP
Sbjct: 289 PPAGGSPPPPRAG-SPPPPPPPRG--SPPTGSLPPPQAGGSPPPAGTGSPPPP 338
Score = 31.9 bits (69), Expect = 0.63
Identities = 29/102 (28%), Positives = 30/102 (29%)
Frame = +2
Query: 197 PXXXXPPXPXXXKXXPPXGPKXKXPPFXXKKKXKSVXPPPXXXXXPPXCLXIPXXTGGGG 376
P PP P PP PP PPP PP G G
Sbjct: 282 PTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPA-------GTGS 334
Query: 377 XXPPPXXXXXGGXXGPPVQAVTKXNTGPXRNNTGXPXXPRGG 502
PPP PP + TG TG P PRGG
Sbjct: 335 PPPPPRQKRQAPERSPPTGS---PPTGSP--PTGRP--PRGG 369
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 39.1 bits (87), Expect = 0.004
Identities = 29/105 (27%), Positives = 32/105 (30%), Gaps = 5/105 (4%)
Frame = +1
Query: 214 PGPXXXKKXPPPGAXXKXPPXXPKKKXKKCXXPPXXXXXPPXVPXYPXPXXGGGXXTPPP 393
P P + PPP + PP P + P PP P P GG PPP
Sbjct: 279 PTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPP 338
Query: 394 XXXXGXXXRXPGPGXXKKXHGP---XPXQHWXAXXPPGGXG--PP 513
P P GP P PP G G PP
Sbjct: 339 PGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPP 383
Score = 34.7 bits (76), Expect = 0.089
Identities = 32/121 (26%), Positives = 34/121 (28%)
Frame = +1
Query: 271 PXXPKKKXKKCXXPPXXXXXPPXVPXYPXPXXGGGXXTPPPXXXXGXXXRXPGPGXXKKX 450
P P PP P P P P G PPP G R PGP
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPP-PSSGMWPPPPPPPPG---RTPGPPGMPGM 316
Query: 451 HGPXPXQHWXAXXPPGGXGPPXXXXPKRXXXXXXIFPXGXPLXXXPXXGGDXTNXXPPXX 630
P P + PPG G P P +P G P P PP
Sbjct: 317 PPPPPPSRF---GPPGMGGMPPPPPPGMR------YPGGMPPPPPPRYPSAGPGMYPPPP 367
Query: 631 P 633
P
Sbjct: 368 P 368
Score = 32.3 bits (70), Expect = 0.48
Identities = 30/128 (23%), Positives = 35/128 (27%)
Frame = +1
Query: 241 PPPGAXXKXPPXXPKKKXKKCXXPPXXXXXPPXVPXYPXPXXGGGXXTPPPXXXXGXXXR 420
PPP + PP P PP PP +P P TP P G
Sbjct: 265 PPPPSVTPMPPPMPPTPGMTPRPPP-----PPSSGMWPPPPPPPPGRTPGPPGMPGMPPP 319
Query: 421 XPGPGXXKKXHGPXPXQHWXAXXPPGGXGPPXXXXPKRXXXXXXIFPXGXPLXXXPXXGG 600
P G P PGG PP P+ ++P P G
Sbjct: 320 PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP--PPPRYPSAGPGMYPPPPPSRPPAPPSG 377
Query: 601 DXTNXXPP 624
PP
Sbjct: 378 HGMIPPPP 385
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/74 (29%), Positives = 23/74 (31%), Gaps = 2/74 (2%)
Frame = +2
Query: 212 PPXPXXXKXXPPXGPKXKXPPFXXKKKXKSVXPPPXXXXXPPXCLXIPXXTGGGGXXPPP 391
PP P PP P P + PPP PP P G G PPP
Sbjct: 265 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPP----PPPPPGRTPGPPGMPGMPPPP 320
Query: 392 XXXXXG--GXXGPP 427
G G G P
Sbjct: 321 PPSRFGPPGMGGMP 334
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/75 (26%), Positives = 22/75 (29%), Gaps = 9/75 (12%)
Frame = +1
Query: 196 PXXKXXPGPXXXKKXPPPGAXXKXPPXXPKKKXKKCXXPPXXXXXPPXVPXY-------- 351
P P P + PPG PP P + PP P P
Sbjct: 311 PGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSR 370
Query: 352 -PXPXXGGGXXTPPP 393
P P G G PPP
Sbjct: 371 PPAPPSGHGMIPPPP 385
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 39.1 bits (87), Expect = 0.004
Identities = 29/105 (27%), Positives = 32/105 (30%), Gaps = 5/105 (4%)
Frame = +1
Query: 214 PGPXXXKKXPPPGAXXKXPPXXPKKKXKKCXXPPXXXXXPPXVPXYPXPXXGGGXXTPPP 393
P P + PPP + PP P + P PP P P GG PPP
Sbjct: 289 PTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPP 348
Query: 394 XXXXGXXXRXPGPGXXKKXHGP---XPXQHWXAXXPPGGXG--PP 513
P P GP P PP G G PP
Sbjct: 349 PGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPP 393
Score = 34.7 bits (76), Expect = 0.089
Identities = 32/121 (26%), Positives = 34/121 (28%)
Frame = +1
Query: 271 PXXPKKKXKKCXXPPXXXXXPPXVPXYPXPXXGGGXXTPPPXXXXGXXXRXPGPGXXKKX 450
P P PP P P P P G PPP G R PGP
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPP-PSSGMWPPPPPPPPG---RTPGPPGMPGM 326
Query: 451 HGPXPXQHWXAXXPPGGXGPPXXXXPKRXXXXXXIFPXGXPLXXXPXXGGDXTNXXPPXX 630
P P + PPG G P P +P G P P PP
Sbjct: 327 PPPPPPSRF---GPPGMGGMPPPPPPGMR------YPGGMPPPPPPRYPSAGPGMYPPPP 377
Query: 631 P 633
P
Sbjct: 378 P 378
Score = 32.3 bits (70), Expect = 0.48
Identities = 30/128 (23%), Positives = 35/128 (27%)
Frame = +1
Query: 241 PPPGAXXKXPPXXPKKKXKKCXXPPXXXXXPPXVPXYPXPXXGGGXXTPPPXXXXGXXXR 420
PPP + PP P PP PP +P P TP P G
Sbjct: 275 PPPPSVTPMPPPMPPTPGMTPRPPP-----PPSSGMWPPPPPPPPGRTPGPPGMPGMPPP 329
Query: 421 XPGPGXXKKXHGPXPXQHWXAXXPPGGXGPPXXXXPKRXXXXXXIFPXGXPLXXXPXXGG 600
P G P PGG PP P+ ++P P G
Sbjct: 330 PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP--PPPRYPSAGPGMYPPPPPSRPPAPPSG 387
Query: 601 DXTNXXPP 624
PP
Sbjct: 388 HGMIPPPP 395
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/74 (29%), Positives = 23/74 (31%), Gaps = 2/74 (2%)
Frame = +2
Query: 212 PPXPXXXKXXPPXGPKXKXPPFXXKKKXKSVXPPPXXXXXPPXCLXIPXXTGGGGXXPPP 391
PP P PP P P + PPP PP P G G PPP
Sbjct: 275 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPP----PPPPPGRTPGPPGMPGMPPPP 330
Query: 392 XXXXXG--GXXGPP 427
G G G P
Sbjct: 331 PPSRFGPPGMGGMP 344
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/75 (26%), Positives = 22/75 (29%), Gaps = 9/75 (12%)
Frame = +1
Query: 196 PXXKXXPGPXXXKKXPPPGAXXKXPPXXPKKKXKKCXXPPXXXXXPPXVPXY-------- 351
P P P + PPG PP P + PP P P
Sbjct: 321 PGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSR 380
Query: 352 -PXPXXGGGXXTPPP 393
P P G G PPP
Sbjct: 381 PPAPPSGHGMIPPPP 395
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 34.7 bits (76), Expect = 0.089
Identities = 26/111 (23%), Positives = 28/111 (25%)
Frame = +1
Query: 196 PXXKXXPGPXXXKKXPPPGAXXKXPPXXPKKKXKKCXXPPXXXXXPPXVPXYPXPXXGGG 375
P PGP + P P P P + PP P P G
Sbjct: 172 PSGPPSPGPVDPSEDPQPSGSSSPGPVDPSDEPSP-SGPPSPGPVDPSEDPKPSEPPSPG 230
Query: 376 XXTPPPXXXXGXXXRXPGPGXXKKXHGPXPXQHWXAXXPPGGXGPPXXXXP 528
P PGP P P PPG GPP P
Sbjct: 231 PVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGP-PTRRPPGPPGPPTRRPP 280
Score = 32.7 bits (71), Expect = 0.36
Identities = 26/104 (25%), Positives = 28/104 (26%)
Frame = +1
Query: 196 PXXKXXPGPXXXKKXPPPGAXXKXPPXXPKKKXKKCXXPPXXXXXPPXVPXYPXPXXGGG 375
P PGP P P P P + K P P P P G
Sbjct: 189 PSGSSSPGPVDPSDEPSPSGPPSPGPVDPSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPG 248
Query: 376 XXTPPPXXXXGXXXRXPGPGXXKKXHGPXPXQHWXAXXPPGGXG 507
PP G PGP + P P PPG G
Sbjct: 249 PPGPPTRRPPG----PPGPPTRRPPGPPGP----PTRRPPGHQG 284
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 34.3 bits (75), Expect = 0.12
Identities = 22/75 (29%), Positives = 23/75 (30%), Gaps = 3/75 (4%)
Frame = +2
Query: 212 PPXPXXXKXXPPXGPKXKXPPFXXKKKXKSVXPPPXXXXX---PPXCLXIPXXTGGGGXX 382
PP P P GP P + PP PP P GGGG
Sbjct: 749 PPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGM 808
Query: 383 PPPXXXXXGGXXGPP 427
PP G GPP
Sbjct: 809 YPPLIPTRPGPGGPP 823
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 34.3 bits (75), Expect = 0.12
Identities = 32/125 (25%), Positives = 34/125 (27%), Gaps = 9/125 (7%)
Frame = +1
Query: 181 GXXXXPXXKXXPGPXXXKKXP-PPGAXXKX-PPXXPKKKXKKCXXPPXXXXXPPXVPXYP 354
G P PG P PPG P PK +KC P PP P
Sbjct: 114 GPPGPPGRDGRPGAPGRPGNPGPPGRDGALLPGPPPKPPCQKCPPGPPGPAGPPGPKGLP 173
Query: 355 XPXXGGG-------XXTPPPXXXXGXXXRXPGPGXXKKXHGPXPXQHWXAXXPPGGXGPP 513
P G P P G PG P + PPG GPP
Sbjct: 174 GPQGDAGTSGQDGVPGLPGPPGPSGPQGAPGVPGEKGPTGEPGKVINGAPPGPPGPPGPP 233
Query: 514 XXXXP 528
P
Sbjct: 234 GPQGP 238
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 34.3 bits (75), Expect = 0.12
Identities = 22/75 (29%), Positives = 23/75 (30%), Gaps = 3/75 (4%)
Frame = +2
Query: 212 PPXPXXXKXXPPXGPKXKXPPFXXKKKXKSVXPPPXXXXX---PPXCLXIPXXTGGGGXX 382
PP P P GP P + PP PP P GGGG
Sbjct: 749 PPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGM 808
Query: 383 PPPXXXXXGGXXGPP 427
PP G GPP
Sbjct: 809 YPPLIPTRPGPGGPP 823
>Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical
protein F33A8.9 protein.
Length = 346
Score = 33.9 bits (74), Expect = 0.16
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = -3
Query: 510 GAXPPRGXXGXPVLXRXGPVXFFVTAWTGGPXXPPXXXXXGGGXXP-PPPVXXGI 349
G P+G G P GP F++T+ GP PP GG P PP GI
Sbjct: 211 GPPGPKGPRGTP--GPTGPKNFYITSGPPGPPGPPGPPGNPGGIGPRGPPGDPGI 263
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 33.9 bits (74), Expect = 0.16
Identities = 26/106 (24%), Positives = 34/106 (32%), Gaps = 5/106 (4%)
Frame = +2
Query: 212 PPXPXXXKXXPPXGPKXKXPPFXXKKKXKSVXPPPXXXXX---PPXCLXIPXXTGGGGXX 382
PP P PP P + ++ S PPP PP P G G
Sbjct: 64 PPPPPKGTGTPPPPPTGEPQDLSAEEGNASRRPPPPPKGTGTPPPPPTGEPQDLSGEGNA 123
Query: 383 P--PPXXXXXGGXXGPPVQAVTKXNTGPXRNNTGXPXXPRGGXAPP 514
PP G PP + +G + P P+G +PP
Sbjct: 124 SRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPP 169
Score = 31.1 bits (67), Expect = 1.1
Identities = 26/106 (24%), Positives = 31/106 (29%), Gaps = 5/106 (4%)
Frame = +2
Query: 212 PPXPXXXKXXPPXGPKXKXPPFXXKKKXKSVXPPPXXXXX--PPXCLXIPXXTGGGGXX- 382
PP P PP P + + PPP PP P G G
Sbjct: 96 PPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNAS 155
Query: 383 --PPPXXXXXGGXXGPPVQAVTKXNTGPXRNNTGXPXXPRGGXAPP 514
PPP G PP +T + P P+G PP
Sbjct: 156 RRPPPPPKGTGSPPPPPTGEPQDLST-EGNASRRPPPPPKGTGTPP 200
Score = 29.9 bits (64), Expect = 2.5
Identities = 24/106 (22%), Positives = 31/106 (29%), Gaps = 5/106 (4%)
Frame = +2
Query: 212 PPXPXXXKXXPPXGPKXKXPPFXXKKKXKSVXPPPXXXXX--PPXCLXIPXXTG---GGG 376
PP P PP P + + PPP PP P G
Sbjct: 33 PPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEEGNA 92
Query: 377 XXPPPXXXXXGGXXGPPVQAVTKXNTGPXRNNTGXPXXPRGGXAPP 514
PP G PP + +G + P P+G +PP
Sbjct: 93 SRRPPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPP 138
Score = 29.5 bits (63), Expect = 3.4
Identities = 25/105 (23%), Positives = 32/105 (30%), Gaps = 4/105 (3%)
Frame = +2
Query: 212 PPXPXXXKXXPPXGPKXKXPPFXXKK-KXKSVXPPPXXXXXP-PXCLXIPXXTGGGGXXP 385
PP P PP P + + + PPP P P P G G
Sbjct: 189 PPPPPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPPKGTGSPTPPPTGEPQDLSGEGNAS 248
Query: 386 --PPXXXXXGGXXGPPVQAVTKXNTGPXRNNTGXPXXPRGGXAPP 514
PP G PP + +G + P P+G PP
Sbjct: 249 RRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPP 293
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 33.9 bits (74), Expect = 0.16
Identities = 33/118 (27%), Positives = 39/118 (33%), Gaps = 3/118 (2%)
Frame = +1
Query: 169 PXXXGXXXXPXXKXXPG--PXXXKKXPPPGAXX-KXPPXXPKKKXKKCXXPPXXXXXPPX 339
P G P PG P + PP G K PP ++ PP
Sbjct: 707 PPPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPPFGRGAGP 766
Query: 340 VPXYPXPXXGGGXXTPPPXXXXGXXXRXPGPGXXKKXHGPXPXQHWXAXXPPGGXGPP 513
+ +P P GG PPP G G G HG P H+ GG GPP
Sbjct: 767 MSSFPPPPRGGMHHMPPPPSFRG------GRG----GHGGPPPPHFDRR---GGGGPP 811
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 32.3 bits (70), Expect = 0.48
Identities = 30/106 (28%), Positives = 31/106 (29%), Gaps = 6/106 (5%)
Frame = +1
Query: 214 PGPXXXKKXP-PPGAXXKX-PPXXPKKKXKKCXXPPXXXXXPPXVPXYPXPXXGGGXXTP 387
PGP P PG K P P K P PP P P G P
Sbjct: 104 PGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGP 163
Query: 388 P----PXXXXGXXXRXPGPGXXKKXHGPXPXQHWXAXXPPGGXGPP 513
P P G GPG P + A PGG G P
Sbjct: 164 PGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEP 209
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.3 bits (70), Expect = 0.48
Identities = 32/113 (28%), Positives = 32/113 (28%)
Frame = -1
Query: 533 LFGXXXXGGPXPPGGXXAXQCCXGXGPCXFLXXPGPGXLXXXPXXXXGGGVXXPPPXXGX 354
LF GG G C G G C P G GGG PPP
Sbjct: 21 LFPSAGGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCG 80
Query: 353 GX*GTXGGXXXXXGGXXHFFXFFXGKXGGXXFXAPGGGXFFXXXGPGXXXXXG 195
G G GG GG G GG GGG G G G
Sbjct: 81 GGCGGGGGGCGGGGGGCG----GGGGCGGGGGGCGGGGGGCGGGGGGCGGGGG 129
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.3 bits (70), Expect = 0.48
Identities = 32/113 (28%), Positives = 32/113 (28%)
Frame = -1
Query: 533 LFGXXXXGGPXPPGGXXAXQCCXGXGPCXFLXXPGPGXLXXXPXXXXGGGVXXPPPXXGX 354
LF GG G C G G C P G GGG PPP
Sbjct: 21 LFPSAGGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCG 80
Query: 353 GX*GTXGGXXXXXGGXXHFFXFFXGKXGGXXFXAPGGGXFFXXXGPGXXXXXG 195
G G GG GG G GG GGG G G G
Sbjct: 81 GGCGGGGGGCGGGGGGCG----GGGGCGGGGGGCGGGGGGCGGGGGGCGGGGG 129
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 32.3 bits (70), Expect = 0.48
Identities = 30/106 (28%), Positives = 31/106 (29%), Gaps = 6/106 (5%)
Frame = +1
Query: 214 PGPXXXKKXP-PPGAXXKX-PPXXPKKKXKKCXXPPXXXXXPPXVPXYPXPXXGGGXXTP 387
PGP P PG K P P K P PP P P G P
Sbjct: 104 PGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGP 163
Query: 388 P----PXXXXGXXXRXPGPGXXKKXHGPXPXQHWXAXXPPGGXGPP 513
P P G GPG P + A PGG G P
Sbjct: 164 PGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEP 209
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 32.3 bits (70), Expect = 0.48
Identities = 30/106 (28%), Positives = 31/106 (29%), Gaps = 6/106 (5%)
Frame = +1
Query: 214 PGPXXXKKXP-PPGAXXKX-PPXXPKKKXKKCXXPPXXXXXPPXVPXYPXPXXGGGXXTP 387
PGP P PG K P P K P PP P P G P
Sbjct: 104 PGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGP 163
Query: 388 P----PXXXXGXXXRXPGPGXXKKXHGPXPXQHWXAXXPPGGXGPP 513
P P G GPG P + A PGG G P
Sbjct: 164 PGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEP 209
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 32.3 bits (70), Expect = 0.48
Identities = 30/106 (28%), Positives = 31/106 (29%), Gaps = 6/106 (5%)
Frame = +1
Query: 214 PGPXXXKKXP-PPGAXXKX-PPXXPKKKXKKCXXPPXXXXXPPXVPXYPXPXXGGGXXTP 387
PGP P PG K P P K P PP P P G P
Sbjct: 104 PGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGP 163
Query: 388 P----PXXXXGXXXRXPGPGXXKKXHGPXPXQHWXAXXPPGGXGPP 513
P P G GPG P + A PGG G P
Sbjct: 164 PGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEP 209
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.9 bits (69), Expect = 0.63
Identities = 21/73 (28%), Positives = 21/73 (28%)
Frame = +1
Query: 310 PPXXXXXPPXVPXYPXPXXGGGXXTPPPXXXXGXXXRXPGPGXXKKXHGPXPXQHWXAXX 489
PP PP P G G PPP G P GP P A
Sbjct: 386 PPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYG 445
Query: 490 PPGGXGPPXXXXP 528
PP PP P
Sbjct: 446 PPPTGFPPVGAPP 458
Score = 30.3 bits (65), Expect = 1.9
Identities = 28/93 (30%), Positives = 31/93 (33%), Gaps = 2/93 (2%)
Frame = +2
Query: 242 PPXGPKXKXPPFXXKKKXKSVXPPPXXXXXPPXCLXIPXXTGGGGXXPPPXXXXXGGXXG 421
PP GP PP + PPP P P GG PPP G
Sbjct: 334 PPQGPPQGGPP-----QGSFGAPPPQQFHAPS-----PQSFGG----PPPPVSSAPGNFA 379
Query: 422 PPVQAVTKXNTGPXRNNTGXPXXP--RGGXAPP 514
PP Q+ P + G P P GG PP
Sbjct: 380 PPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPP 412
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 429 TGGPXXPPXXXXXGGGXXPPPP 364
TGGP PP GG PPPP
Sbjct: 710 TGGPPPPPGLPPITGGPPPPPP 731
Score = 30.3 bits (65), Expect = 1.9
Identities = 26/88 (29%), Positives = 26/88 (29%), Gaps = 3/88 (3%)
Frame = +1
Query: 241 PPPGAXX--KXPPXXPKKKXKKCXXPPXXXXXPPXVPXYPXPXXGGG-XXTPPPXXXXGX 411
PPPG PP P PP PP P P GG PPP
Sbjct: 715 PPPGLPPITGGPPPPPPPGG----LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 412 XXRXPGPGXXKKXHGPXPXQHWXAXXPP 495
P PG K P P A P
Sbjct: 771 PPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/69 (30%), Positives = 22/69 (31%), Gaps = 2/69 (2%)
Frame = +2
Query: 314 PXXXXXPPXCLXIPXXTGGGGXXPPP--XXXXXGGXXGPPVQAVTKXNTGPXRNNTGXPX 487
P PP +P TGG PPP GG PP P P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP----PPGGLPPISGGPPPPP 762
Query: 488 XPRGGXAPP 514
P GG PP
Sbjct: 763 PPPGGCPPP 771
Score = 29.5 bits (63), Expect = 3.4
Identities = 25/92 (27%), Positives = 26/92 (28%), Gaps = 2/92 (2%)
Frame = +1
Query: 331 PPXVPXYPXPXXGGGXXTPPPXXXXGXXXRXPGPGXXKKXHGPXPXQHWXAXXPPGG--X 504
PP P P GG PPP P P P P PPGG
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP-----PPPPPGGFKG 782
Query: 505 GPPXXXXPKRXXXXXXIFPXGXPLXXXPXXGG 600
GPP P + P P P G
Sbjct: 783 GPPPPPPPGMFAPMAPVIPDYLPPKKVPKVDG 814
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = -3
Query: 513 GGAXPPRGXXGXPVLXRXGPVXFFVTAWTGGPXXPPXXXXXGGGXXPPPP 364
GG PP G P + P P PP GG PPPP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 429 TGGPXXPPXXXXXGGGXXPPPP 364
TGGP PP GG PPPP
Sbjct: 710 TGGPPPPPGLPPITGGPPPPPP 731
Score = 30.3 bits (65), Expect = 1.9
Identities = 26/88 (29%), Positives = 26/88 (29%), Gaps = 3/88 (3%)
Frame = +1
Query: 241 PPPGAXX--KXPPXXPKKKXKKCXXPPXXXXXPPXVPXYPXPXXGGG-XXTPPPXXXXGX 411
PPPG PP P PP PP P P GG PPP
Sbjct: 715 PPPGLPPITGGPPPPPPPGG----LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 412 XXRXPGPGXXKKXHGPXPXQHWXAXXPP 495
P PG K P P A P
Sbjct: 771 PPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/69 (30%), Positives = 22/69 (31%), Gaps = 2/69 (2%)
Frame = +2
Query: 314 PXXXXXPPXCLXIPXXTGGGGXXPPP--XXXXXGGXXGPPVQAVTKXNTGPXRNNTGXPX 487
P PP +P TGG PPP GG PP P P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP----PPGGLPPISGGPPPPP 762
Query: 488 XPRGGXAPP 514
P GG PP
Sbjct: 763 PPPGGCPPP 771
Score = 29.5 bits (63), Expect = 3.4
Identities = 25/92 (27%), Positives = 26/92 (28%), Gaps = 2/92 (2%)
Frame = +1
Query: 331 PPXVPXYPXPXXGGGXXTPPPXXXXGXXXRXPGPGXXKKXHGPXPXQHWXAXXPPGG--X 504
PP P P GG PPP P P P P PPGG
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP-----PPPPPGGFKG 782
Query: 505 GPPXXXXPKRXXXXXXIFPXGXPLXXXPXXGG 600
GPP P + P P P G
Sbjct: 783 GPPPPPPPGMFAPMAPVIPDYLPPKKVPKVDG 814
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = -3
Query: 513 GGAXPPRGXXGXPVLXRXGPVXFFVTAWTGGPXXPPXXXXXGGGXXPPPP 364
GG PP G P + P P PP GG PPPP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 429 TGGPXXPPXXXXXGGGXXPPPP 364
TGGP PP GG PPPP
Sbjct: 293 TGGPPPPPGLPPITGGPPPPPP 314
Score = 30.3 bits (65), Expect = 1.9
Identities = 26/88 (29%), Positives = 26/88 (29%), Gaps = 3/88 (3%)
Frame = +1
Query: 241 PPPGAXX--KXPPXXPKKKXKKCXXPPXXXXXPPXVPXYPXPXXGGG-XXTPPPXXXXGX 411
PPPG PP P PP PP P P GG PPP
Sbjct: 298 PPPGLPPITGGPPPPPPPGG----LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 353
Query: 412 XXRXPGPGXXKKXHGPXPXQHWXAXXPP 495
P PG K P P A P
Sbjct: 354 PPPPPPPGGFKGGPPPPPPPGMFAPMAP 381
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/69 (30%), Positives = 22/69 (31%), Gaps = 2/69 (2%)
Frame = +2
Query: 314 PXXXXXPPXCLXIPXXTGGGGXXPPP--XXXXXGGXXGPPVQAVTKXNTGPXRNNTGXPX 487
P PP +P TGG PPP GG PP P P
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP----PPGGLPPISGGPPPPP 345
Query: 488 XPRGGXAPP 514
P GG PP
Sbjct: 346 PPPGGCPPP 354
Score = 29.5 bits (63), Expect = 3.4
Identities = 25/92 (27%), Positives = 26/92 (28%), Gaps = 2/92 (2%)
Frame = +1
Query: 331 PPXVPXYPXPXXGGGXXTPPPXXXXGXXXRXPGPGXXKKXHGPXPXQHWXAXXPPGG--X 504
PP P P GG PPP P P P P PPGG
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP-----PPPPPGGFKG 365
Query: 505 GPPXXXXPKRXXXXXXIFPXGXPLXXXPXXGG 600
GPP P + P P P G
Sbjct: 366 GPPPPPPPGMFAPMAPVIPDYLPPKKVPKVDG 397
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = -3
Query: 513 GGAXPPRGXXGXPVLXRXGPVXFFVTAWTGGPXXPPXXXXXGGGXXPPPP 364
GG PP G P + P P PP GG PPPP
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 372
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 29.9 bits (64), Expect = 2.5
Identities = 35/142 (24%), Positives = 37/142 (26%), Gaps = 2/142 (1%)
Frame = +1
Query: 205 KXXPGPXXXKKXPPPGAXXKXPPXXPKKKXKKCXXPPXXXXXPPXVPXYPXPXXGGGXXT 384
K P K PP PP P P P P P P G
Sbjct: 138 KGASAPCEAKTPPPCQPCPAGPPGPPGPDGPAGPAGPDGEAGSPAAPSPPGPP---GPPG 194
Query: 385 PPPXXXXGXXXRXPGP-GXXKKXHGPXPXQHWXAXXPPGGXGPPXXXXPKRXXXXXXIFP 561
P PGP G + P P A PPG GPP P
Sbjct: 195 PAGPAGNDGAAGTPGPDGPAGESTYPEPAGPGPA-GPPGPAGPPGPDGASPTAAPGAAGP 253
Query: 562 XGXP-LXXXPXXGGDXTNXXPP 624
G P P G+ PP
Sbjct: 254 PGPPGPAGAPGPDGNPGTAGPP 275
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/65 (29%), Positives = 21/65 (32%)
Frame = +1
Query: 196 PXXKXXPGPXXXKKXPPPGAXXKXPPXXPKKKXKKCXXPPXXXXXPPXVPXYPXPXXGGG 375
P K G PPP PP P + + PP PP P P P
Sbjct: 127 PPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPR-RPPMTPPSPQRRPPRTP--PSPEPRNP 183
Query: 376 XXTPP 390
TPP
Sbjct: 184 PRTPP 188
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 29.5 bits (63), Expect = 3.4
Identities = 29/117 (24%), Positives = 30/117 (25%), Gaps = 3/117 (2%)
Frame = +1
Query: 169 PXXXGXXXXPXXKXXPGPXXXKKXPPPGAXXKXPPXXPKKKXKKCXXPPXXXXXPPXVPX 348
P G P PG P G P P K + P P
Sbjct: 151 PCPGGRPGPPGPPGRPGSDGQPGRPATGGGAAPRPGPPGPKGPRGAPGNSGRAGAPGQPG 210
Query: 349 YPXPXXGGGXXTPPPXXXXGXXXRXPGPGXXKKXHG---PXPXQHWXAXXPPGGXGP 510
GGG P P G PGP G P P A PG GP
Sbjct: 211 NDAHGYGGGVGAPGPAGPRG----APGPAGHPGSSGGGRPGPAGPKGAPGQPGRPGP 263
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +1
Query: 241 PPPGAXXKXPPXXPKKKXKKCXXPPXXXXXPPXVPXY 351
PPP PP P C PP PP V Y
Sbjct: 244 PPPSPVCMPPPPPPCPMPIPCPPPPPACSCPPPVTMY 280
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/73 (27%), Positives = 22/73 (30%)
Frame = +1
Query: 214 PGPXXXKKXPPPGAXXKXPPXXPKKKXKKCXXPPXXXXXPPXVPXYPXPXXGGGXXTPPP 393
P P PPP PP P PP PP P + G PPP
Sbjct: 66 PPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMF------GAPPPPPP 119
Query: 394 XXXXGXXXRXPGP 432
G + P P
Sbjct: 120 PSGLGVAPQPPRP 132
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/55 (32%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Frame = -3
Query: 510 GAXPPRGXXGXPVLXRXGPVXF-FVTAWTGGPXXPPXXXXXGGGXXPPPPVXXGI 349
G PP P PV F+ G PP GG PPPP+ GI
Sbjct: 50 GILPPGQSIPKPSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGI 104
Score = 28.3 bits (60), Expect = 7.8
Identities = 24/82 (29%), Positives = 26/82 (31%), Gaps = 1/82 (1%)
Frame = +2
Query: 269 PPFXXKKKXKSVXPPPXXXXXPPXCLXIPXXTGGGGXXPPPXXXXXGGXXGPPVQAVTKX 448
PP +S+ P P IP G GG PPP GG PP
Sbjct: 47 PPSGILPPGQSIPKPSFFIPPPVPNGFIPPPPGPGG-IPPPPPMFAGGIPPPPPMMGGIP 105
Query: 449 NTGPXRNNTGXPXXPRG-GXAP 511
P P P G G AP
Sbjct: 106 PPPPMFGAPPPPPPPSGLGVAP 127
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +2
Query: 332 PPXCLXIPXXTGGGGXXPPPXXXXXGGXXG 421
PP L +P GGGG PPP GG G
Sbjct: 53 PP--LSLPSLGGGGGCCPPPAPACGGGCGG 80
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 29.1 bits (62), Expect = 4.4
Identities = 24/89 (26%), Positives = 26/89 (29%)
Frame = +1
Query: 247 PGAXXKXPPXXPKKKXKKCXXPPXXXXXPPXVPXYPXPXXGGGXXTPPPXXXXGXXXRXP 426
PGA P P + + PP PP P P G PP P
Sbjct: 124 PGAPGH--PGKPPQSPCEPLTPPPCPACPPGPPGAPGAPGKPGSEGPPGPPGHDGPNGGP 181
Query: 427 GPGXXKKXHGPXPXQHWXAXXPPGGXGPP 513
G HGP PG GPP
Sbjct: 182 GQPGQPGPHGPN-----GHPGKPGSQGPP 205
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 29.1 bits (62), Expect = 4.4
Identities = 23/68 (33%), Positives = 23/68 (33%)
Frame = +2
Query: 308 PPPXXXXXPPXCLXIPXXTGGGGXXPPPXXXXXGGXXGPPVQAVTKXNTGPXRNNTGXPX 487
P P PP P GG G P G GPP Q T N GP G P
Sbjct: 217 PGPAGPPGPPGPGGPPGDAGGAGSDGAP------GPQGPPGQDGTPGNAGP----DGQPG 266
Query: 488 XPRGGXAP 511
P G P
Sbjct: 267 SPGGPGLP 274
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 29.1 bits (62), Expect = 4.4
Identities = 30/117 (25%), Positives = 32/117 (27%), Gaps = 2/117 (1%)
Frame = +1
Query: 169 PXXXGXXXXPXXKXXPGPXXXKKXPPPGAXXKXPPXXPKKKXKKCXXPPXXXXXPPXVPX 348
P G P PG P P PP P P P +P
Sbjct: 159 PGPPGDSGEPGSPGLPGQDAAPGEPGPKGPP-GPPGAPGAPGTP-GEPGVPAQSEPLIPG 216
Query: 349 YPXPXXGGGXXTPPPXXXXGXXXRXPGPGXXKKXHGPXPXQHWXAXXP--PGGXGPP 513
P P G PP PG K +GP Q P PG GPP
Sbjct: 217 EPGPPGEAGPQGPPGSPGQPGADGSPGQPGPKGPNGP-DGQPGADGNPGAPGPAGPP 272
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 29.1 bits (62), Expect = 4.4
Identities = 30/117 (25%), Positives = 33/117 (28%), Gaps = 2/117 (1%)
Frame = +1
Query: 169 PXXXGXXXXPXXKXXPGPXXXKKXPPPGAXXKXPPXXPKKKXKKCXXPPXXXXXPPXVPX 348
P G P PG P P K PP P + P +P
Sbjct: 159 PGPPGDSGEPGSPGLPGQDAAPGEPGPKGP-KGPPGAPGAPEHQ--ESQECPRGEPLIPG 215
Query: 349 YPXPXXGGGXXTPPPXXXXGXXXRXPGPGXXKKXHGPXPXQHWXAXXP--PGGXGPP 513
P P G PP PG K +GP Q P PG GPP
Sbjct: 216 EPGPPGEAGPQGPPGSPGQPGADGSPGQPGPKGPNGP-DGQPGADGNPGAPGPAGPP 271
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 29.1 bits (62), Expect = 4.4
Identities = 30/117 (25%), Positives = 32/117 (27%), Gaps = 2/117 (1%)
Frame = +1
Query: 169 PXXXGXXXXPXXKXXPGPXXXKKXPPPGAXXKXPPXXPKKKXKKCXXPPXXXXXPPXVPX 348
P G P PG P P PP P P P +P
Sbjct: 159 PGPPGDSGEPGSPGLPGQDAAPGEPGPKGPP-GPPGAPGAPGTP-GEPGVPAQSEPLIPG 216
Query: 349 YPXPXXGGGXXTPPPXXXXGXXXRXPGPGXXKKXHGPXPXQHWXAXXP--PGGXGPP 513
P P G PP PG K +GP Q P PG GPP
Sbjct: 217 EPGPPGEAGPQGPPGSPGQPGADGSPGQPGPKGPNGP-DGQPGADGNPGAPGPAGPP 272
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +2
Query: 299 SVXPPPXXXXXPPXCLXIPXXTGGGGXXPPPXXXXXGGXXGPP 427
S PPP PP C GGG PPP G PP
Sbjct: 25 SCCPPPQCCGPPPAC---GNPCGGGFGPPPPPFGPVGYALPPP 64
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/62 (30%), Positives = 19/62 (30%)
Frame = -1
Query: 494 GGXXAXQCCXGXGPCXFLXXPGPGXLXXXPXXXXGGGVXXPPPXXGXGX*GTXGGXXXXX 315
GG C G G C G G P GGG G G G GG
Sbjct: 28 GGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGG 87
Query: 314 GG 309
GG
Sbjct: 88 GG 89
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 28.7 bits (61), Expect = 5.9
Identities = 26/101 (25%), Positives = 29/101 (28%), Gaps = 1/101 (0%)
Frame = +1
Query: 214 PGPXXXKKXPPPGAXXKXP-PXXPKKKXKKCXXPPXXXXXPPXVPXYPXPXXGGGXXTPP 390
PGP P A + P P P+ P P P P TP
Sbjct: 145 PGPQGPSGAPGQDAVGEGPGPAGPQGPAGDAGAP--GQAGAPGHPGAPGQGGQRSRGTPG 202
Query: 391 PXXXXGXXXRXPGPGXXKKXHGPXPXQHWXAXXPPGGXGPP 513
P G GPG + G A PGG G P
Sbjct: 203 PAGAPGPQGPAGGPGQPGQSGGAGAPGPAGAPGAPGGPGQP 243
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/65 (27%), Positives = 22/65 (33%)
Frame = +1
Query: 196 PXXKXXPGPXXXKKXPPPGAXXKXPPXXPKKKXKKCXXPPXXXXXPPXVPXYPXPXXGGG 375
P P P PPPG P P ++ ++ PP PP P P GG
Sbjct: 88 PQPTPGPPPPRNNCLPPPG------PPPPCQQYQQPQPPPCQRPQPPQPQPQPYPQRTGG 141
Query: 376 XXTPP 390
P
Sbjct: 142 CLPSP 146
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/65 (27%), Positives = 22/65 (33%)
Frame = +1
Query: 196 PXXKXXPGPXXXKKXPPPGAXXKXPPXXPKKKXKKCXXPPXXXXXPPXVPXYPXPXXGGG 375
P P P PPPG P P ++ ++ PP PP P P GG
Sbjct: 88 PQPTPGPPPPRNNCLPPPG------PPPPCQQYQQPQPPPCQRPQPPQPQPQPYPQRTGG 141
Query: 376 XXTPP 390
P
Sbjct: 142 CLPSP 146
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/65 (27%), Positives = 22/65 (33%)
Frame = +1
Query: 196 PXXKXXPGPXXXKKXPPPGAXXKXPPXXPKKKXKKCXXPPXXXXXPPXVPXYPXPXXGGG 375
P P P PPPG P P ++ ++ PP PP P P GG
Sbjct: 88 PQPTPGPPPPRNNCLPPPG------PPPPCQQYQQPQPPPCQRPQPPQPQPQPYPQRTGG 141
Query: 376 XXTPP 390
P
Sbjct: 142 CLPSP 146
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 28.7 bits (61), Expect = 5.9
Identities = 30/103 (29%), Positives = 30/103 (29%), Gaps = 3/103 (2%)
Frame = +1
Query: 214 PGPXXXKKXP-PPGAXXKX-PPXXPKKKXKKCXXPPXXXXXPPXVPXYPXPXXGGGXXTP 387
PGP P PG K P P K P PP P G P
Sbjct: 119 PGPPGPGGRPGKPGTPGKPGAPGNPGASGKGAAAPCEPSTPPPC-----QPCPAGPPGPP 173
Query: 388 PPXXXXGXXXRXPGP-GXXKKXHGPXPXQHWXAXXPPGGXGPP 513
P G PGP G GP P PPG G P
Sbjct: 174 GPDGTPGEPG-GPGPAGSPAGPSGPGPAGPPGPAGPPGNDGQP 215
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/61 (29%), Positives = 21/61 (34%)
Frame = +2
Query: 242 PPXGPKXKXPPFXXKKKXKSVXPPPXXXXXPPXCLXIPXXTGGGGXXPPPXXXXXGGXXG 421
PP P F + PPP PP + +P G G PPP G G
Sbjct: 609 PPPPPPPPPQSFGMAPISSAAPPPPP----PPPPMGLPAV--GAGAPPPPPPPPPSGAGG 662
Query: 422 P 424
P
Sbjct: 663 P 663
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/61 (29%), Positives = 21/61 (34%)
Frame = +2
Query: 242 PPXGPKXKXPPFXXKKKXKSVXPPPXXXXXPPXCLXIPXXTGGGGXXPPPXXXXXGGXXG 421
PP P F + PPP PP + +P G G PPP G G
Sbjct: 435 PPPPPPPPPQSFGMAPISSAAPPPPP----PPPPMGLPAV--GAGAPPPPPPPPPSGAGG 488
Query: 422 P 424
P
Sbjct: 489 P 489
>U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 13 protein.
Length = 302
Score = 28.7 bits (61), Expect = 5.9
Identities = 20/64 (31%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Frame = +2
Query: 353 PXXTGGGGXXPPPXXXXXGGXXGPPVQAVTKXNTGP--XRNNTGXPXXPRGGXAPPXXXX 526
P TG G PP G G P Q K GP G P P G PP
Sbjct: 221 PGSTGEPGPVGPPGPSGQPGNDGTPGQPGPKGPPGPDGKPGADGNPGQP-GPVGPPGTPG 279
Query: 527 QKGV 538
++G+
Sbjct: 280 ERGI 283
>M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein (
C.elegans collagen (dpy-13) gene, complete cds. ).
Length = 302
Score = 28.7 bits (61), Expect = 5.9
Identities = 20/64 (31%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Frame = +2
Query: 353 PXXTGGGGXXPPPXXXXXGGXXGPPVQAVTKXNTGP--XRNNTGXPXXPRGGXAPPXXXX 526
P TG G PP G G P Q K GP G P P G PP
Sbjct: 221 PGSTGEPGPVGPPGPSGQPGNDGTPGQPGPKGPPGPDGKPGADGNPGQP-GPVGPPGTPG 279
Query: 527 QKGV 538
++G+
Sbjct: 280 ERGI 283
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +2
Query: 308 PPPXXXXXPPXCLXIPXXTGGGGXXPPPXXXXXGGXXGPP 427
PPP PP C P GGG PPP G P
Sbjct: 34 PPP-----PPACAPPPAPACGGGAPPPPAYAAPAPSYGAP 68
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.3 bits (60), Expect = 7.8
Identities = 26/101 (25%), Positives = 27/101 (26%)
Frame = +2
Query: 212 PPXPXXXKXXPPXGPKXKXPPFXXKKKXKSVXPPPXXXXXPPXCLXIPXXTGGGGXXPPP 391
PP P P P PP + PPP PP P TG PPP
Sbjct: 491 PPMPSINGHAPNPPPP---PPLLGIAPMSTNAPPP-----PPMPGMAPLSTGAPTPPPPP 542
Query: 392 XXXXXGGXXGPPVQAVTKXNTGPXRNNTGXPXXPRGGXAPP 514
G PP G P P PP
Sbjct: 543 PVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPPPPPP 583
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.3 bits (60), Expect = 7.8
Identities = 19/59 (32%), Positives = 19/59 (32%)
Frame = +1
Query: 217 GPXXXKKXPPPGAXXKXPPXXPKKKXKKCXXPPXXXXXPPXVPXYPXPXXGGGXXTPPP 393
GP PPP PP P C PP PP P P P PPP
Sbjct: 26 GPPPCPPPPPPMC---APPPLPCPPPPIC--PPQFCPPPPMCPPPPPPPPPPMCPPPPP 79
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/82 (26%), Positives = 23/82 (28%), Gaps = 6/82 (7%)
Frame = +2
Query: 308 PPPXXXXXPPXCLXIPXXTGGGGXXPPPXXXXXGGXXGPPVQAVTKXNTG----PXRNNT 475
P P P +P G G PPP G G Q G P N
Sbjct: 186 PGPDGNAGPAGAPGVPGPDGDAGSPPPPGPPGPPGPPGNDGQPGAPGQDGQPGAPGTNTV 245
Query: 476 GXP--XXPRGGXAPPXXXXQKG 535
P P G PP Q G
Sbjct: 246 NSPGGPGPAGPPGPPGPPGQDG 267
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.152 0.558
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,212,406
Number of Sequences: 27780
Number of extensions: 226154
Number of successful extensions: 998
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 687
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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