Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_J01
(905 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC053853-1|AAH53853.1| 291|Homo sapiens PHYHD1 protein protein. 96 2e-19
AL672142-6|CAI10842.1| 291|Homo sapiens phytanoyl-CoA dioxygena... 96 2e-19
BC051300-1|AAH51300.1| 270|Homo sapiens PHYHD1 protein protein. 73 1e-12
AL672142-5|CAI10841.1| 255|Homo sapiens phytanoyl-CoA dioxygena... 73 1e-12
AL672142-4|CAI10840.1| 177|Homo sapiens phytanoyl-CoA dioxygena... 73 2e-12
BC009373-1|AAH09373.1| 297|Homo sapiens phytanoyl-CoA dioxygena... 42 0.004
AL672142-7|CAI10843.1| 297|Homo sapiens phytanoyl-CoA dioxygena... 42 0.004
>BC053853-1|AAH53853.1| 291|Homo sapiens PHYHD1 protein protein.
Length = 291
Score = 95.9 bits (228), Expect = 2e-19
Identities = 47/112 (41%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
Frame = +1
Query: 394 PELSLNKVGHALHLLHPIFRCYTYSETREEHLQRSLALSSRLWCKACIFLRNPGIGSEVV 573
PE S+NK+GHALH P+F+ T+S + + L RSL L + ++ + P G EV
Sbjct: 96 PEKSINKIGHALHAHDPVFKSITHS-FKVQTLARSLGLQMPVVVQSMYIFKQPHFGGEVS 154
Query: 574 AHQDATYLYTEPTPPV-GFWIALEEATVQNGCLWLXXXXXXXXXXXXLIRNP 726
HQDA++LYTEP V G WIA+E+AT++NGCLW ++R P
Sbjct: 155 PHQDASFLYTEPLGRVLGVWIAVEDATLENGCLWFIPGSHTSGVSRRMVRAP 206
Score = 37.9 bits (84), Expect = 0.050
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +3
Query: 837 GNVVHKSSHNKSDXSRHAYTFHV 905
G VVHKS N SD SR AYTFH+
Sbjct: 242 GEVVHKSKQNLSDRSRQAYTFHL 264
>AL672142-6|CAI10842.1| 291|Homo sapiens phytanoyl-CoA dioxygenase
domain containing 1 protein.
Length = 291
Score = 95.9 bits (228), Expect = 2e-19
Identities = 47/112 (41%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
Frame = +1
Query: 394 PELSLNKVGHALHLLHPIFRCYTYSETREEHLQRSLALSSRLWCKACIFLRNPGIGSEVV 573
PE S+NK+GHALH P+F+ T+S + + L RSL L + ++ + P G EV
Sbjct: 96 PEKSINKIGHALHAHDPVFKSITHS-FKVQTLARSLGLQMPVVVQSMYIFKQPHFGGEVS 154
Query: 574 AHQDATYLYTEPTPPV-GFWIALEEATVQNGCLWLXXXXXXXXXXXXLIRNP 726
HQDA++LYTEP V G WIA+E+AT++NGCLW ++R P
Sbjct: 155 PHQDASFLYTEPLGRVLGVWIAVEDATLENGCLWFIPGSHTSGVSRRMVRAP 206
Score = 37.9 bits (84), Expect = 0.050
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +3
Query: 837 GNVVHKSSHNKSDXSRHAYTFHV 905
G VVHKS N SD SR AYTFH+
Sbjct: 242 GEVVHKSKQNLSDRSRQAYTFHL 264
>BC051300-1|AAH51300.1| 270|Homo sapiens PHYHD1 protein protein.
Length = 270
Score = 72.9 bits (171), Expect = 1e-12
Identities = 42/112 (37%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Frame = +1
Query: 394 PELSLNKVGHALHLLHPIFRCYTYSETREEHLQRSLALSSRLWCKACIFLRNPGIGSEVV 573
PE S+NK+GHALH P+F+ T+S ++ P G EV
Sbjct: 96 PEKSINKIGHALHAHDPVFKSITHS----------------------FKVQQPHFGGEVS 133
Query: 574 AHQDATYLYTEPTPPV-GFWIALEEATVQNGCLWLXXXXXXXXXXXXLIRNP 726
HQDA++LYTEP V G WIA+E+AT++NGCLW ++R P
Sbjct: 134 PHQDASFLYTEPLGRVLGVWIAVEDATLENGCLWFIPGSHTSGVSRRMVRAP 185
Score = 37.9 bits (84), Expect = 0.050
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +3
Query: 837 GNVVHKSSHNKSDXSRHAYTFHV 905
G VVHKS N SD SR AYTFH+
Sbjct: 221 GEVVHKSKQNLSDRSRQAYTFHL 243
>AL672142-5|CAI10841.1| 255|Homo sapiens phytanoyl-CoA dioxygenase
domain containing 1 protein.
Length = 255
Score = 72.9 bits (171), Expect = 1e-12
Identities = 42/112 (37%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Frame = +1
Query: 394 PELSLNKVGHALHLLHPIFRCYTYSETREEHLQRSLALSSRLWCKACIFLRNPGIGSEVV 573
PE S+NK+GHALH P+F+ T+S ++ P G EV
Sbjct: 96 PEKSINKIGHALHAHDPVFKSITHS----------------------FKVQQPHFGGEVS 133
Query: 574 AHQDATYLYTEPTPPV-GFWIALEEATVQNGCLWLXXXXXXXXXXXXLIRNP 726
HQDA++LYTEP V G WIA+E+AT++NGCLW ++R P
Sbjct: 134 PHQDASFLYTEPLGRVLGVWIAVEDATLENGCLWFIPGSHTSGVSRRMVRAP 185
Score = 37.9 bits (84), Expect = 0.050
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +3
Query: 837 GNVVHKSSHNKSDXSRHAYTFHV 905
G VVHKS N SD SR AYTFH+
Sbjct: 221 GEVVHKSKQNLSDRSRQAYTFHL 243
>AL672142-4|CAI10840.1| 177|Homo sapiens phytanoyl-CoA dioxygenase
domain containing 1 protein.
Length = 177
Score = 72.5 bits (170), Expect = 2e-12
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +1
Query: 394 PELSLNKVGHALHLLHPIFRCYTYSETREEHLQRSLALSSRLWCKACIFLRNPGIGSEVV 573
PE S+NK+GHALH P+F+ T+S + + L RSL L + ++ + P G EV
Sbjct: 96 PEKSINKIGHALHAHDPVFKSITHS-FKVQTLARSLGLQMPVVVQSMYIFKQPHFGGEVS 154
Query: 574 AHQDATYLYTEPTPPV-GFWIAL 639
HQDA++LYTEP V G WIA+
Sbjct: 155 PHQDASFLYTEPLGRVLGVWIAV 177
>BC009373-1|AAH09373.1| 297|Homo sapiens phytanoyl-CoA dioxygenase
domain containing 1 protein.
Length = 297
Score = 41.5 bits (93), Expect = 0.004
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +1
Query: 394 PELSLNKVGHALHLLHPIFRCYTYSETREEHLQRSLALSSRLWCKACIFLRNP 552
PE S+NK+GHALH P+F+ T+S + + L RSL L + ++ ++P
Sbjct: 96 PEKSINKIGHALHAHDPVFKSITHS-FKVQTLARSLGLQMPVVVQSMYIFKSP 147
Score = 32.7 bits (71), Expect = 1.9
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +3
Query: 480 RAFAKKLGFIEPAVVQSMYIFKKPWHWFRSGCT 578
+ A+ LG P VVQSMYIFK P CT
Sbjct: 124 QTLARSLGLQMPVVVQSMYIFKSPLIRTPPSCT 156
>AL672142-7|CAI10843.1| 297|Homo sapiens phytanoyl-CoA dioxygenase
domain containing 1 protein.
Length = 297
Score = 41.5 bits (93), Expect = 0.004
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +1
Query: 394 PELSLNKVGHALHLLHPIFRCYTYSETREEHLQRSLALSSRLWCKACIFLRNP 552
PE S+NK+GHALH P+F+ T+S + + L RSL L + ++ ++P
Sbjct: 96 PEKSINKIGHALHAHDPVFKSITHS-FKVQTLARSLGLQMPVVVQSMYIFKSP 147
Score = 32.7 bits (71), Expect = 1.9
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +3
Query: 480 RAFAKKLGFIEPAVVQSMYIFKKPWHWFRSGCT 578
+ A+ LG P VVQSMYIFK P CT
Sbjct: 124 QTLARSLGLQMPVVVQSMYIFKSPLIRTPPSCT 156
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,086,680
Number of Sequences: 237096
Number of extensions: 2229775
Number of successful extensions: 4845
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4835
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11714809042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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