Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_J01
         (905 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1163|AAF54534.2|  287|Drosophila melanogaster CG14688-P...   118   8e-27

>AE014297-1163|AAF54534.2|  287|Drosophila melanogaster CG14688-PA
           protein.
          Length = 287

 Score =  118 bits (285), Expect = 8e-27
 Identities = 56/149 (37%), Positives = 84/149 (56%)
 Frame = +1

Query: 322 SNEQXKVFLRKXEPSTPMEILQSKPELSLNKVGHALHLLHPIFRCYTYSETREEHLQRSL 501
           S ++ + F  K       ++L   P ++LNKVGHALH+ HP F   T+S  R   +   L
Sbjct: 65  SGDKVRYFFEKGAVGDEGQLLVD-PMIALNKVGHALHVEHPAFNAITFSN-RVREICWQL 122

Query: 502 ALSSRLWCKACIFLRNPGIGSEVVAHQDATYLYTEPTPPVGFWIALEEATVQNGCLWLXX 681
             +    C++    +NPG+G EV  HQD+ +L+T+P   VGFW+ALE+ T+QNGCL    
Sbjct: 123 NYNKPAVCQSMYIYKNPGVGGEVTPHQDSWFLHTDPNSAVGFWLALEDCTLQNGCLQFIK 182

Query: 682 XXXXXXXXXXLIRNPDEDSDEALIYDKPA 768
                      +RNPD+D+ E ++YD+ A
Sbjct: 183 GSHKSGVHRRYLRNPDKDASELMVYDRAA 211



 Score = 43.6 bits (98), Expect = 4e-04
 Identities = 20/36 (55%), Positives = 22/36 (61%)
 Frame = +3

Query: 798 PYRFRKERVYYYTGNVVHKSSHNKSDXSRHAYTFHV 905
           P +  K       GNVVHKS  N+S  SRHAYTFHV
Sbjct: 221 PMQVSKGTCILIHGNVVHKSEPNRSQKSRHAYTFHV 256



 Score = 43.2 bits (97), Expect = 5e-04
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = +2

Query: 773 VXPQSSFTPIPVSKGTCILLHG 838
           + PQSSFTP+ VSKGTCIL+HG
Sbjct: 213 IYPQSSFTPMQVSKGTCILIHG 234


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,510,208
Number of Sequences: 53049
Number of extensions: 663909
Number of successful extensions: 1954
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1951
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4423507848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)