Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_I17
(879 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1412 + 26893221-26893613,26894205-26894587,26894697-268948... 51 1e-06
04_03_0791 + 19685720-19685914,19686436-19686459,19686823-196872... 47 2e-05
04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036 36 0.032
03_02_0348 + 7709894-7709926,7710516-7710604,7711202-7711277,771... 35 0.075
01_04_0038 - 15339047-15339230,15339683-15339741,15340031-153401... 34 0.13
01_06_0343 + 28566513-28566644,28566791-28568494,28569178-285692... 32 0.70
02_01_0265 - 1754861-1755063,1755186-1755360,1755558-1755653,175... 31 1.2
09_04_0287 - 16407324-16407551,16407647-16407748,16407824-164079... 30 2.1
10_08_0829 - 20871810-20872011,20873226-20873359,20873480-208773... 29 4.9
06_03_0206 - 17898551-17900056,17900439-17900564,17902420-17902881 29 4.9
02_02_0157 - 7280335-7280541,7280656-7280762,7280918-7281097,728... 29 4.9
11_06_0315 + 22318155-22318210,22319743-22319769,22319868-223199... 29 6.5
03_05_0322 - 23094767-23094873,23094956-23095199,23095288-23095479 29 6.5
03_05_0304 - 22950314-22950408,22950903-22951167,22951256-22951447 29 6.5
05_05_0360 - 24395993-24397540,24397626-24397730,24398731-24399111 28 8.6
>08_02_1412 +
26893221-26893613,26894205-26894587,26894697-26894814,
26894998-26895192,26895318-26895542,26895773-26895832,
26895956-26896036,26896142-26896547,26896730-26896965
Length = 698
Score = 51.2 bits (117), Expect = 1e-06
Identities = 28/74 (37%), Positives = 40/74 (54%)
Frame = +3
Query: 657 RAKMEDLIKRRFFYDQSFAIYGGIYWPV*FWSYGMCT*E*HDPLMEEVFILQEQMLEVEC 836
R + + ++R+ FY SF IY G+ + G + F+L+E MLEV+C
Sbjct: 85 RQAVVNTLERKLFYIPSFKIYRGVAGLYDYGPPGCAVKANVLAFWRQHFVLEENMLEVDC 144
Query: 837 SILTPEPVLKASGH 878
+TPE VLKASGH
Sbjct: 145 PCVTPEVVLKASGH 158
>04_03_0791 +
19685720-19685914,19686436-19686459,19686823-19687205,
19687282-19687379,19687622-19687800,19687912-19688136,
19688619-19688678,19688816-19688896,19688983-19689388,
19690035-19690285
Length = 633
Score = 47.2 bits (107), Expect = 2e-05
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Frame = +3
Query: 657 RAKMEDLIKRRFFYDQSFAIYGGIYWPV*FWSYGMCT*E*HDPLMEEV--------FILQ 812
R + + ++RR FY SF IYGG+ + G ++ F+L+
Sbjct: 19 RVAVTNTLERRLFYVPSFKIYGGVAGLYDYGPPGCAVKANVLAFWRQMCRSTRYLHFVLE 78
Query: 813 EQMLEVECSILTPEPVLKASGH 878
E MLEV+C +TPE VLKASGH
Sbjct: 79 EGMLEVDCPCVTPEVVLKASGH 100
Score = 33.9 bits (74), Expect = 0.17
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +1
Query: 733 GQFDFGPMGCALKSNMIHLWKK 798
G +D+GP GCA+K+N++ W++
Sbjct: 44 GLYDYGPPGCAVKANVLAFWRQ 65
>04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036
Length = 762
Score = 36.3 bits (80), Expect = 0.032
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 4/103 (3%)
Frame = +3
Query: 384 SHSQQWGSNKLHRKIKIPNPFREIIMADPKIEEILAPLRANVKEQGDLVRKLKEEKAPEI 563
S S++W S +L I EII A ++++ L ++ E +L KLK +A +
Sbjct: 539 SASEEWQSKELSFVNSIKKSEEEIINARAQMDKTLEAVKGKESENAELQEKLKHLEAQLM 598
Query: 564 DIKKAVAELKTR----KKILEDKELSLAPAEDLFDRAKMEDLI 680
+ K E K K+ L DKE L + D + ++L+
Sbjct: 599 EANKTCEEAKAETFQWKEKLLDKENELQNIKQENDDLQAKELV 641
>03_02_0348 +
7709894-7709926,7710516-7710604,7711202-7711277,
7712019-7712214,7712449-7712832,7712884-7714804,
7714906-7714966,7715952-7716371
Length = 1059
Score = 35.1 bits (77), Expect = 0.075
Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Frame = +3
Query: 390 SQQWGSNKLHRKIKIPNPFREIIMADPKIEEILAPLRANVKEQGDLVRKLKEEKA---PE 560
++QW K + K+ +E+I A + + L +++E+GDL+ K+ EEKA E
Sbjct: 194 TKQWEKIKAEFEAKLLEFEQELIRAGAENDA----LSRSLEERGDLLMKIDEEKARAEAE 249
Query: 561 IDIKKAV--AELKTRKKILEDKELSLAPAEDLFDRAKMEDLIK 683
I++ K +EL+ R E+K +S+ A D+ + MED+ K
Sbjct: 250 IEVLKNTIQSELEIRN---EEKNMSVRSA-DVATKQHMEDVKK 288
>01_04_0038 -
15339047-15339230,15339683-15339741,15340031-15340160,
15340248-15340498,15340632-15341225,15342050-15342511
Length = 559
Score = 34.3 bits (75), Expect = 0.13
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +3
Query: 477 EEILAPLRANVKEQGDLVRKLKEEKAPEIDIKKAVAELKTRKK 605
E + R VKE+GD V +LK KA + +I AVAEL K+
Sbjct: 222 ESDIEAARVVVKEKGDAVAQLKAAKASKQEITAAVAELNKAKE 264
>01_06_0343 +
28566513-28566644,28566791-28568494,28569178-28569240,
28569241-28569310,28570438-28570715,28571886-28571963,
28573017-28573715,28573811-28573913,28574096-28574196,
28574272-28574446,28574843-28575013,28575534-28575634,
28575706-28575771
Length = 1246
Score = 31.9 bits (69), Expect = 0.70
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +3
Query: 405 SNKLHRKIKIPNPFREIIMADPKIEEILAPLRANVKEQG-DLVRKLKEEKAPEIDIKKAV 581
+ ++ K+ + N E++ A+ ++ + A E D R+ KEE + +K A
Sbjct: 243 AREMEAKLAVTNSDVEVLQAEMELVRAMEKSHAKSDEAAEDAARRKKEEAQDKALLKTAE 302
Query: 582 AELKTRKKILE 614
AEL KK LE
Sbjct: 303 AELDAAKKELE 313
>02_01_0265 -
1754861-1755063,1755186-1755360,1755558-1755653,
1756110-1756256,1756343-1756511,1756661-1756812,
1756898-1756968,1757064-1757247,1757332-1757523,
1757664-1757771
Length = 498
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = +3
Query: 447 REIIMADPKIEEILAPLRANVKEQGDLVRKLKEEKAPEIDIKKAVAELKTRKKILED--K 620
+E+ + ++E+ A L+ANV + RK++E K D+K A L ++ ++D K
Sbjct: 144 QELKSSKRSLDELTAMLKANVDAINNFTRKMEELKRQRDDLKALEANL---EQTVQDGAK 200
Query: 621 ELSLAPAEDLFDRAKMEDLIKR 686
+L + AK E+ +K+
Sbjct: 201 DLEQLMSSRSMHLAKQEECMKK 222
>09_04_0287 -
16407324-16407551,16407647-16407748,16407824-16407922,
16408213-16408332,16408513-16408632,16408740-16408834,
16409109-16409365,16410134-16410309,16410401-16410587,
16410656-16411002,16411722-16411823,16411917-16412414,
16412520-16412624
Length = 811
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 486 LAPLRANVKEQGDLVRKLKEEKAPE 560
L+PL VKE+G L+ +KEEKA +
Sbjct: 88 LSPLTVPVKEEGQLLEPVKEEKADD 112
>10_08_0829 - 20871810-20872011,20873226-20873359,20873480-20877313,
20878057-20878177,20878414-20878451,20879096-20879218,
20879308-20879505,20880270-20880356
Length = 1578
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +3
Query: 420 RKIKIPNPFREIIMAD-PKIEEILAPLRANVKEQGDLVRKLKEEKAPEIDIKKAVAELKT 596
++I+I + +++ D P ++E L A +K + ++R E +I + E T
Sbjct: 1383 KQIEISAQTKLVMLGDEPPVKETSDVLEAELKSELSIIRGANSEYQQKIHSLQKENEDLT 1442
Query: 597 RKKILEDKELSLAPAED 647
R+ L +KEL L +++
Sbjct: 1443 RRNQLMEKELDLKTSQN 1459
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +3
Query: 420 RKIKIPNPFREIIMAD-PKIEEILAPLRANVKEQGDLVRKLKEEKAPEIDIKKAVAELKT 596
++I+I + +++ D P ++E L A +K + ++R E +I + E T
Sbjct: 1236 KQIEISAQTKLVMLGDEPPVKETSDVLEAELKSELSIIRGANSEYQQKIYSLQEENEDLT 1295
Query: 597 RKKILEDKELSLAPAED 647
R+ L +KEL L +++
Sbjct: 1296 RRNQLMEKELDLKTSQN 1312
>06_03_0206 - 17898551-17900056,17900439-17900564,17902420-17902881
Length = 697
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +3
Query: 450 EIIMADPKIEEILAPLRANVKEQGDLVRKLKEEKAPE--IDIKKAVAELKTRKKILEDKE 623
E+ A +++E+L R E LVR++ E+K + D +K A L++ ++ +ED+
Sbjct: 255 ELQHAHARVQELLQERRRYHYEIDSLVRQVSEDKMTQKSKDQEKVKAALRSLQEEIEDER 314
Query: 624 LSLAPAEDLFDRAKME 671
+E L + K E
Sbjct: 315 HLRKHSESLHRKLKKE 330
>02_02_0157 -
7280335-7280541,7280656-7280762,7280918-7281097,
7281182-7281277,7281378-7281459,7281553-7283037,
7283376-7283450,7283521-7283598,7283708-7283791,
7283885-7283965,7284073-7284291,7284398-7284648,
7284748-7284796
Length = 997
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +3
Query: 507 VKEQGDLVRKLKEEKAPEIDIKKAVAELKTRKKILEDKELSLAPAEDLFDRAKME 671
+KE+ D+VR LK EK I++K AE +T++ EDK + +D DR E
Sbjct: 330 LKEKEDMVRLLK-EKEGMINLKTVKAE-ETQRIEDEDKYRIIKEKDDALDRLVKE 382
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/71 (23%), Positives = 36/71 (50%)
Frame = +3
Query: 507 VKEQGDLVRKLKEEKAPEIDIKKAVAELKTRKKILEDKELSLAPAEDLFDRAKMEDLIKR 686
+KE+ D+V +L EEK + + K ++ K E +++ ++ DR +M D IK
Sbjct: 429 IKEKNDVVLRLTEEKEEMVRLLKEKEDIIRLMK--EKEDMVYLEKGEVEDRKQMTDDIKD 486
Query: 687 RFFYDQSFAIY 719
+ ++ ++
Sbjct: 487 KLIKEKDDIVF 497
>11_06_0315 +
22318155-22318210,22319743-22319769,22319868-22319990,
22320867-22321110,22321487-22321981
Length = 314
Score = 28.7 bits (61), Expect = 6.5
Identities = 24/94 (25%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Frame = +3
Query: 348 NKSQSSXNHLRLSHSQQWGSNKLHRKIKIPNPFREII-MADPKIEEILAPLRANVKEQGD 524
+ QS + S++ +K ++ K P P ++ + PK+ + PL+ + KE
Sbjct: 154 SSKQSGKSWKDSKSSKESKDSKSSKESKEPKPSKDSKQLKPPKVSKESKPLK-DSKEDKK 212
Query: 525 LVRKLKEEKAPEI-DIKKAVAELKTRKKILEDKE 623
V++ K+ A + + KKA+ + K KK L+D +
Sbjct: 213 AVKEDKKAAAKDSKEQKKALKDSKELKKALKDSK 246
>03_05_0322 - 23094767-23094873,23094956-23095199,23095288-23095479
Length = 180
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = +3
Query: 474 IEEILAPLRANV----KEQGDLVRKLKEEKAPEIDIKKAVAELKTRKKILEDKELSLAPA 641
+ E+L LR V +E+GD ++E + + ++ A EL T +K++ +KE +
Sbjct: 82 VREVLNDLRDEVWKLRREKGDFSAAVEEGRCVQSELVLARNELATSRKVVGEKEAVVGVL 141
Query: 642 ED 647
+D
Sbjct: 142 KD 143
>03_05_0304 - 22950314-22950408,22950903-22951167,22951256-22951447
Length = 183
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +3
Query: 474 IEEILAPLRANV----KEQGDLVRKLKEEKAPEIDIKKAVAELKTRKKILEDKELSLAPA 641
+ E+L LR V +E+GD ++E + + ++ A EL T +K + +KE +
Sbjct: 82 LREVLNDLRDEVWKLRREKGDFPAAVEEGRFAQSELVLARNELATSRKAVGEKEAIVGVL 141
Query: 642 EDLFDRAKME 671
+D R + E
Sbjct: 142 KDTNSRLEFE 151
>05_05_0360 - 24395993-24397540,24397626-24397730,24398731-24399111
Length = 677
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 450 EIIMADPKIEEILAPLRANVKEQGDLVRKLKEEKA 554
E++ A +I E+ A R+ K+ LVR L EEKA
Sbjct: 213 ELLQAHNRIHELEAESRSAKKKLDHLVRNLAEEKA 247
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,324,306
Number of Sequences: 37544
Number of extensions: 317319
Number of successful extensions: 803
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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