Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_I14
         (914 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.     167   4e-43
Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.       140   4e-35
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   7.4  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   9.8  
AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.         23   9.8  

>AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.
          Length = 136

 Score =  167 bits (406), Expect = 4e-43
 Identities = 83/83 (100%), Positives = 83/83 (100%)
 Frame = +2

Query: 344 TVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLF 523
           TVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLF
Sbjct: 46  TVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLF 105

Query: 524 EDTNLCAIHAKRVTIMPKDIQLA 592
           EDTNLCAIHAKRVTIMPKDIQLA
Sbjct: 106 EDTNLCAIHAKRVTIMPKDIQLA 128



 Score = 97.1 bits (231), Expect = 7e-22
 Identities = 45/45 (100%), Positives = 45/45 (100%)
 Frame = +1

Query: 208 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPG 342
           MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPG
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPG 45


>Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.
          Length = 115

 Score =  140 bits (340), Expect = 4e-35
 Identities = 69/72 (95%), Positives = 71/72 (98%)
 Frame = +2

Query: 344 TVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLF 523
           TVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEASEAYLVGLF
Sbjct: 44  TVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLF 103

Query: 524 EDTNLCAIHAKR 559
           EDTNLCAIHAKR
Sbjct: 104 EDTNLCAIHAKR 115



 Score = 89.8 bits (213), Expect = 1e-19
 Identities = 41/43 (95%), Positives = 42/43 (97%)
 Frame = +1

Query: 214 RTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPG 342
           RTKQTARKSTGGKAPRKQLA KAARKSAP+TGGVKKPHRYRPG
Sbjct: 1   RTKQTARKSTGGKAPRKQLARKAARKSAPATGGVKKPHRYRPG 43


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.8 bits (49), Expect = 7.4
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 613 RSPRIRXXXLNILRHDGHTFGVNSTQV 533
           RS  +R   L    H G + G+N+TQV
Sbjct: 85  RSHEVRAFLLKNSSHSGASSGLNTTQV 111


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 111  NGVEENGWVKLTPSSL 64
            NGV  + W+ + PSSL
Sbjct: 2849 NGVATSSWILMNPSSL 2864


>AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.
          Length = 304

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +2

Query: 314 SRSHIVIALATVALREIRR 370
           +R H+ ++LAT  +R +RR
Sbjct: 149 NRPHLFVSLATTQVRRLRR 167


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 686,602
Number of Sequences: 2352
Number of extensions: 11351
Number of successful extensions: 26
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 99228240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)