BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_I09
(883 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 116 6e-25
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 95 2e-18
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 91 3e-17
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 69 1e-10
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 69 2e-10
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 63 1e-08
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 60 6e-08
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 2e-06
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 51 4e-05
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 41 0.036
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.048
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.084
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 37 0.78
UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;... 36 1.8
UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase... 34 4.2
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 5.5
UniRef50_A5HC74 Cluster: Putative uncharacterized protein; n=1; ... 34 5.5
UniRef50_Q4RMS4 Cluster: Chromosome 3 SCAF15018, whole genome sh... 33 7.3
UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer ariet... 33 7.3
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 33 7.3
UniRef50_UPI0000E256C9 Cluster: PREDICTED: hypothetical protein;... 33 9.6
UniRef50_Q98B58 Cluster: Alcohol dehydrogenase; n=8; Alphaproteo... 33 9.6
UniRef50_A3MA42 Cluster: Putative uncharacterized protein; n=1; ... 33 9.6
UniRef50_A3JX20 Cluster: YqhH; n=1; Sagittula stellata E-37|Rep:... 33 9.6
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 116 bits (280), Expect = 6e-25
Identities = 70/118 (59%), Positives = 76/118 (64%), Gaps = 6/118 (5%)
Frame = +1
Query: 490 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 669
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 670 XPLTGYLSAF--LPSGSVALSH----SSRCRYLSSV*VVRSKLGCVHEPPFSPTAAPY 825
L F + ++H S RCR + V C + PPFSPTAAPY
Sbjct: 62 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAV-----CTN-PPFSPTAAPY 113
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 95.1 bits (226), Expect = 2e-18
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = +1
Query: 508 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 669
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 91.1 bits (216), Expect = 3e-17
Identities = 44/55 (80%), Positives = 45/55 (81%)
Frame = +1
Query: 514 RPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPXPL 678
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P L
Sbjct: 78 RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGL 132
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +3
Query: 321 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 419
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 69.3 bits (162), Expect = 1e-10
Identities = 41/60 (68%), Positives = 42/60 (70%)
Frame = -3
Query: 563 MLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIPLILWITVLPPLSELIPLAAAERP 384
MLVRGAEPMEKR + L V LL CS L PLILWITVLPPLSEL PLAA ERP
Sbjct: 1 MLVRGAEPMEKRLRCWLLPVLCFLLT-CSFRL---YPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 68.5 bits (160), Expect = 2e-10
Identities = 37/68 (54%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Frame = -1
Query: 799 GVRAHSPAWSERPTPN*DTYSVSYEKAPRFPKGERRTGIR*AXRVGTGERTRE-LPGGNA 623
GVRA+SPAWSERP P+ DT SVSYEKAPRFPKG++ + R G R E G +
Sbjct: 27 GVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVS-GKRQGRNRRAHEGAAGEKS 85
Query: 622 WYLYSPVG 599
SPVG
Sbjct: 86 PASLSPVG 93
Score = 47.6 bits (108), Expect = 4e-04
Identities = 32/91 (35%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = -3
Query: 851 GXTQDDSYX*GAAVGLNGG-SCTQPSLERTTYTELRYLQREL*ESATLPEGRKADRYPVS 675
G TQDDSY G + G P+ ++ P+G+KA++
Sbjct: 9 GWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSGK 68
Query: 674 GQGRNRRAHEGASRGKRLVSL*SCRVSPPLT 582
QGRNRRAHEGA+ K SL PPLT
Sbjct: 69 RQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 62.9 bits (146), Expect = 1e-08
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +1
Query: 673 PLTGYLSAFLPSGSVALSHSSRCRYLSSV 759
PLTGYLSAFLPSGSVALSHSSRCRYLSSV
Sbjct: 9 PLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 60.5 bits (140), Expect = 6e-08
Identities = 33/63 (52%), Positives = 37/63 (58%)
Frame = +2
Query: 611 IKIPGVSPWKLPRALSCSDPXRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVC 790
+KI VS LP ALSCS+P PPFSL + + GIS RCRSFAPSWAV
Sbjct: 32 LKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCRSFAPSWAVS 91
Query: 791 TNP 799
NP
Sbjct: 92 KNP 94
Score = 45.2 bits (102), Expect = 0.002
Identities = 31/81 (38%), Positives = 34/81 (41%)
Frame = +1
Query: 583 VRGGETRQDYKDTRRFPLEAPSCALLFRPXPLTGYLSAFLPSGSVALSHSSRCRYLSSV* 762
VR GETRQD K P P + F +GSVALSHSS +
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCR 82
Query: 763 VVRSKLGCVHEPPFSPTAAPY 825
PPFSPTAAPY
Sbjct: 83 SFAPSWAVSKNPPFSPTAAPY 103
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.6 bits (128), Expect = 2e-06
Identities = 31/54 (57%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +3
Query: 297 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQG 455
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 50.8 bits (116), Expect = 4e-05
Identities = 27/71 (38%), Positives = 39/71 (54%)
Frame = +1
Query: 457 ITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL 636
I +R + + + P T F S PLT+ITKI Q + +T+ +YK T FPL
Sbjct: 44 IMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPL 103
Query: 637 EAPSCALLFRP 669
++PS +LLF P
Sbjct: 104 QSPSYSLLFPP 114
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 100 DPDMIRYIDEFGQTTTRMQ 156
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 41.1 bits (92), Expect = 0.036
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -1
Query: 799 GVRAHSPAWSERPTPN 752
GVRAHSPAWSERPTPN
Sbjct: 27 GVRAHSPAWSERPTPN 42
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.048
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 295 SALMNRPTRGERRFAYW 345
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.084
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1
Query: 367 ERGSGRAPNTQTASPRALADSLMQ 296
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 36.7 bits (81), Expect = 0.78
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -1
Query: 799 GVRAHSPAWSERPTPN*DT 743
GV A+SPAWSERPTP+ DT
Sbjct: 27 GVLAYSPAWSERPTPSRDT 45
>UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;
Janthinobacterium sp. Marseille|Rep: Uncharacterized
conserved protein - Janthinobacterium sp. (strain
Marseille) (Minibacterium massiliensis)
Length = 212
Score = 35.5 bits (78), Expect = 1.8
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = -3
Query: 590 PLT*ASIFVMLVRGAEPMEKRQQRGL---FTVPGLLLAFCSHVLSCVIPLILWITVLPPL 420
PLT AS+ + L+ P+ + + RGL T+ G ++A +S V L+L T+L PL
Sbjct: 50 PLTVASLIMFLIANLFPIVEIELRGLRSQTTLTGAVMALAGEGMSLVAMLVLATTLLFPL 109
Query: 419 SELIPL 402
+L+ L
Sbjct: 110 LQLLIL 115
>UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase
kinase 10; n=21; Euteleostomi|Rep: Mitogen-activated
protein kinase kinase kinase 10 - Homo sapiens (Human)
Length = 954
Score = 34.3 bits (75), Expect = 4.2
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = -2
Query: 690 QVSGKRXGSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPF 511
++ G GS+Q S+ G++P + GFA+ + +F +A GG + +P + P
Sbjct: 575 RLKGLGEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYSTPS 634
Query: 510 YGSWP 496
Y S P
Sbjct: 635 YLSVP 639
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 5.5
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 178 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 345
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
>UniRef50_A5HC74 Cluster: Putative uncharacterized protein; n=1;
Adineta vaga|Rep: Putative uncharacterized protein -
Adineta vaga
Length = 400
Score = 33.9 bits (74), Expect = 5.5
Identities = 22/64 (34%), Positives = 32/64 (50%)
Frame = -2
Query: 630 ETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSWPFAGLLLTCSFLRYPP 451
E GIF GF + L +D C + GG A +T + G+W + G L C+ + PP
Sbjct: 247 EGGGIF-KRKGFYYTMLGIDCCFCQWGGDA--RTFISNNPLGNWTYFGQLNYCADGKAPP 303
Query: 450 DSVD 439
D +D
Sbjct: 304 DHID 307
>UniRef50_Q4RMS4 Cluster: Chromosome 3 SCAF15018, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 3
SCAF15018, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 754
Score = 33.5 bits (73), Expect = 7.3
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +1
Query: 424 GGNTVIHRIRGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETR 603
GG+ V ++GI+ ERT + +P + PR W S+ P + +++GG+ R
Sbjct: 611 GGHGVPGELQGIS-ERTLLELTRGKP-LLSHPRAWFVSLDGKPAAQVRHSIIELQGGQRR 668
Query: 604 QDYKDT 621
DT
Sbjct: 669 PSSNDT 674
>UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer
arietinum|Rep: Reverse transcriptase - Cicer arietinum
(Chickpea) (Garbanzo)
Length = 37
Score = 33.5 bits (73), Expect = 7.3
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 430 NTVIHRIRGITQERTCE 480
NTVIH +GITQERTCE
Sbjct: 21 NTVIHXNQGITQERTCE 37
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.5 bits (73), Expect = 7.3
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -2
Query: 258 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQIN 91
+MNA V + FIAA + +T + AFF L S G ++VSY VW ++
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDLH 77
>UniRef50_UPI0000E256C9 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 211
Score = 33.1 bits (72), Expect = 9.6
Identities = 27/89 (30%), Positives = 35/89 (39%)
Frame = -2
Query: 780 QLGANDLHRTEIPTA*AMRKRHASRREKGGQVSGKRXGSEQESARGSFQGETPGIFIVLS 601
Q A + + ++P R+ R GG+ GKR + AR S + I
Sbjct: 65 QRAAKEGEKGKLPLGGRRRRSETGRGTAGGREGGKR---RERGARSSSRHRPRQIRGRGE 121
Query: 600 GFATSDLSVDFCDARQGGGAYGKTPATRP 514
A DA QGG A GK PA RP
Sbjct: 122 AQARPRQEASGDDATQGGRARGKPPAARP 150
>UniRef50_Q98B58 Cluster: Alcohol dehydrogenase; n=8;
Alphaproteobacteria|Rep: Alcohol dehydrogenase -
Rhizobium loti (Mesorhizobium loti)
Length = 408
Score = 33.1 bits (72), Expect = 9.6
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +2
Query: 590 VAKPDRTIKIPGVSPWKLPRALSCSDPXRLPDTCPPFSLREAWRFLIAHAV-GISVRCRS 766
++ PDRT+K+ G+S L A++ DP L TCPP A + HA+ + + R
Sbjct: 152 ISDPDRTLKV-GISSPYLIAAVALCDP-ELTMTCPPALTAIAGADALTHAIEAFTAKQRG 209
Query: 767 FAPSWA 784
PS A
Sbjct: 210 EDPSLA 215
>UniRef50_A3MA42 Cluster: Putative uncharacterized protein; n=1;
Acinetobacter baumannii ATCC 17978|Rep: Putative
uncharacterized protein - Acinetobacter baumannii
(strain ATCC 17978 / NCDC KC 755)
Length = 183
Score = 33.1 bits (72), Expect = 9.6
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = -3
Query: 563 MLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIPLILWITVLPPLSELIPLAAA 393
ML A+ + + ++ GL G+ L C H+++ + L ++P L ++I + A
Sbjct: 1 MLYTAAQTLSRGRKSGLMAAFGIFLGGCFHIIAASLGLTTIFQIIPKLYDIIKILGA 57
>UniRef50_A3JX20 Cluster: YqhH; n=1; Sagittula stellata E-37|Rep:
YqhH - Sagittula stellata E-37
Length = 956
Score = 33.1 bits (72), Expect = 9.6
Identities = 23/84 (27%), Positives = 34/84 (40%)
Frame = -2
Query: 786 TAQLGANDLHRTEIPTA*AMRKRHASRREKGGQVSGKRXGSEQESARGSFQGETPGIFIV 607
T +L A+ L + + TA A R RH + E+ G R + ARG + E
Sbjct: 539 TGELAASRLAQYDPHTADAARARHRAMLERKSLPGGLRPSRPEHGARGPEEAELLAWLEA 598
Query: 606 LSGFATSDLSVDFCDARQGGGAYG 535
L + D+ + D G YG
Sbjct: 599 LRASSLLDVRTGWKDQSVDGARYG 622
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 824,786,355
Number of Sequences: 1657284
Number of extensions: 17091285
Number of successful extensions: 46743
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 44556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46703
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79112361923
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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