Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_I05
         (897 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0241 + 19815996-19816823                                         31   1.6  
01_06_0451 - 29476892-29477516,29477600-29477843,29478313-294787...    29   6.6  
11_04_0227 + 15094941-15095445,15095773-15095865,15096209-150963...    28   8.8  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.8  

>01_05_0241 + 19815996-19816823
          Length = 275

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = +3

Query: 522 PGTVKRPRLLAXIHXAPPP*RASQKSTLKSEVAKPDRTIKI 644
           P T K P+ +  I   P P  A +   L S  AKPD+T+KI
Sbjct: 230 PATTKNPKKVCKIKKTPKPDGAIKIIPLSS--AKPDKTVKI 268


>01_06_0451 -
           29476892-29477516,29477600-29477843,29478313-29478714,
           29481164-29481358,29481418-29481537,29481615-29481683,
           29481901-29481999,29483857-29483946,29484049-29484180,
           29485062-29485173
          Length = 695

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 17/64 (26%), Positives = 29/64 (45%)
 Frame = +3

Query: 522 PGTVKRPRLLAXIHXAPPP*RASQKSTLKSEVAKPDRTIKIPGVSPWKLPRCALLFRPXP 701
           P  ++ PRL +      PP   S++  ++ E+  P  TI   G++   LP  +    P P
Sbjct: 70  PSQLQTPRLQSLGLNVKPPAATSRRVNVQQELYAPSPTISHRGLAIPPLPTTSPPVFPPP 129

Query: 702 LTGY 713
           +  Y
Sbjct: 130 IRSY 133


>11_04_0227 +
           15094941-15095445,15095773-15095865,15096209-15096308,
           15096799-15096874,15099906-15100017,15100924-15101012,
           15101137-15101223,15101623-15101678,15102114-15102462
          Length = 488

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
 Frame = +2

Query: 512 QQKARNRKKAAVAGVYPXGSAPLTSITKIDA---QVRGGETRQDYKDTRRFPLEAPSVRS 682
           +Q  R R+K A+ GV   G  P  S  ++D    QVR G  ++ +K   + P    SV  
Sbjct: 132 EQAERMRRKMALHGV---GKTPGCSSVELDVPEQQVRAGSDQRRHKGVGKTPAGCSSVDL 188

Query: 683 PVP 691
            +P
Sbjct: 189 DIP 191


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 327 NESAN---ARGEAVCVLGALPLPRSLTRCAR 410
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,817,712
Number of Sequences: 37544
Number of extensions: 453223
Number of successful extensions: 1176
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1176
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)