BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_I04
(879 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 25 2.3
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 25 4.0
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 25.4 bits (53), Expect = 2.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 650 PXGPPXPPPP 621
P GPP PPPP
Sbjct: 527 PLGPPPPPPP 536
Score = 24.6 bits (51), Expect = 4.0
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 641 PPXPPPPXKXGP 606
PP PPPP GP
Sbjct: 582 PPAPPPPPPMGP 593
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 24.6 bits (51), Expect = 4.0
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 428 GXGNXXXGGGPPXXKKXXRXXGPPPXKGGGG 520
G G GGG P GP P GGGG
Sbjct: 201 GAGGGGSGGGAPGG-GGGSSGGPGPGGGGGG 230
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 420,604
Number of Sequences: 2352
Number of extensions: 5919
Number of successful extensions: 23
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94266828
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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