Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_I04
(879 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 37 0.022
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.038
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.038
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.038
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 35 0.067
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.12
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.12
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.12
Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical pr... 31 1.1
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 30 1.9
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 30 1.9
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 30 1.9
Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical pr... 30 2.5
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 29 3.3
Z69383-11|CAM06588.1| 110|Caenorhabditis elegans Hypothetical p... 29 5.8
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 5.8
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 5.8
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 29 5.8
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 5.8
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 5.8
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 25 6.7
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 28 7.7
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 36.7 bits (81), Expect = 0.022
Identities = 20/50 (40%), Positives = 21/50 (42%)
Frame = -1
Query: 534 WRGXXPPPPXXGGGPXXRXXFXXXGGPPPXXWFPXPXXXPPXXXFXFPPP 385
WRG PPP GG + GGPPP P P PP PPP
Sbjct: 1569 WRGGPPPPR---GGSHCQGPPPLMGGPPPRLGMPPPGPPPPNGG---PPP 1612
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 516 PPPXXGGGPXXRXXFXXXGGPP 451
PPP GGGP R GGPP
Sbjct: 1482 PPPMRGGGPPMRGGPPMRGGPP 1503
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.9 bits (79), Expect = 0.038
Identities = 23/56 (41%), Positives = 23/56 (41%)
Frame = -1
Query: 528 GXXPPPPXXGGGPXXRXXFXXXGGPPPXXWFPXPXXXPPXXXFXFPPPXXXXGGXP 361
G PPPP GG P GGPPP P P PP PPP GG P
Sbjct: 724 GGPPPPPPPGGLP------PITGGPPPP---PPPGGLPPISGGP-PPPPPPPGGCP 769
Score = 34.3 bits (75), Expect = 0.12
Identities = 21/58 (36%), Positives = 21/58 (36%)
Frame = -1
Query: 513 PPXXGGGPXXRXXFXXXGGPPPXXWFPXPXXXPPXXXFXFPPPXXXXGGXPXXGXXXP 340
PP GG P GGPPP P P PP PPP GG P P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPP---PPPGGLPPIT--GGPPPPPPPGGLPPISGGPP 759
Score = 33.9 bits (74), Expect = 0.15
Identities = 21/67 (31%), Positives = 22/67 (32%)
Frame = -1
Query: 528 GXXPPPPXXGGGPXXRXXFXXXGGPPPXXWFPXPXXXPPXXXFXFPPPXXXXGGXPXXGX 349
G PPPP GG P PPP P P PP PPP G
Sbjct: 740 GGPPPPPPPGGLPPISGG-PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Query: 348 XXPLWFP 328
P + P
Sbjct: 799 VIPDYLP 805
Score = 24.6 bits (51), Expect(2) = 3.6
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 644 GPPXPPPPXKXGP 606
GPP PPPP P
Sbjct: 783 GPPPPPPPGMFAP 795
Score = 23.0 bits (47), Expect(2) = 3.6
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = -2
Query: 818 PPXXGGXCXXPXXGXGXXGXPPPAXP 741
PP GG P G PPP P
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.9 bits (79), Expect = 0.038
Identities = 23/56 (41%), Positives = 23/56 (41%)
Frame = -1
Query: 528 GXXPPPPXXGGGPXXRXXFXXXGGPPPXXWFPXPXXXPPXXXFXFPPPXXXXGGXP 361
G PPPP GG P GGPPP P P PP PPP GG P
Sbjct: 724 GGPPPPPPPGGLP------PITGGPPPP---PPPGGLPPISGGP-PPPPPPPGGCP 769
Score = 34.3 bits (75), Expect = 0.12
Identities = 21/58 (36%), Positives = 21/58 (36%)
Frame = -1
Query: 513 PPXXGGGPXXRXXFXXXGGPPPXXWFPXPXXXPPXXXFXFPPPXXXXGGXPXXGXXXP 340
PP GG P GGPPP P P PP PPP GG P P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPP---PPPGGLPPIT--GGPPPPPPPGGLPPISGGPP 759
Score = 33.9 bits (74), Expect = 0.15
Identities = 21/67 (31%), Positives = 22/67 (32%)
Frame = -1
Query: 528 GXXPPPPXXGGGPXXRXXFXXXGGPPPXXWFPXPXXXPPXXXFXFPPPXXXXGGXPXXGX 349
G PPPP GG P PPP P P PP PPP G
Sbjct: 740 GGPPPPPPPGGLPPISGG-PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Query: 348 XXPLWFP 328
P + P
Sbjct: 799 VIPDYLP 805
Score = 24.6 bits (51), Expect(2) = 3.6
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 644 GPPXPPPPXKXGP 606
GPP PPPP P
Sbjct: 783 GPPPPPPPGMFAP 795
Score = 23.0 bits (47), Expect(2) = 3.6
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = -2
Query: 818 PPXXGGXCXXPXXGXGXXGXPPPAXP 741
PP GG P G PPP P
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPP 777
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.9 bits (79), Expect = 0.038
Identities = 23/56 (41%), Positives = 23/56 (41%)
Frame = -1
Query: 528 GXXPPPPXXGGGPXXRXXFXXXGGPPPXXWFPXPXXXPPXXXFXFPPPXXXXGGXP 361
G PPPP GG P GGPPP P P PP PPP GG P
Sbjct: 307 GGPPPPPPPGGLP------PITGGPPPP---PPPGGLPPISGGP-PPPPPPPGGCP 352
Score = 34.3 bits (75), Expect = 0.12
Identities = 21/58 (36%), Positives = 21/58 (36%)
Frame = -1
Query: 513 PPXXGGGPXXRXXFXXXGGPPPXXWFPXPXXXPPXXXFXFPPPXXXXGGXPXXGXXXP 340
PP GG P GGPPP P P PP PPP GG P P
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPP---PPPGGLPPIT--GGPPPPPPPGGLPPISGGPP 342
Score = 33.9 bits (74), Expect = 0.15
Identities = 21/67 (31%), Positives = 22/67 (32%)
Frame = -1
Query: 528 GXXPPPPXXGGGPXXRXXFXXXGGPPPXXWFPXPXXXPPXXXFXFPPPXXXXGGXPXXGX 349
G PPPP GG P PPP P P PP PPP G
Sbjct: 323 GGPPPPPPPGGLPPISGG-PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 381
Query: 348 XXPLWFP 328
P + P
Sbjct: 382 VIPDYLP 388
Score = 24.6 bits (51), Expect(2) = 3.7
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 644 GPPXPPPPXKXGP 606
GPP PPPP P
Sbjct: 366 GPPPPPPPGMFAP 378
Score = 23.0 bits (47), Expect(2) = 3.7
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = -2
Query: 818 PPXXGGXCXXPXXGXGXXGXPPPAXP 741
PP GG P G PPP P
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPP 360
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 35.1 bits (77), Expect = 0.067
Identities = 20/54 (37%), Positives = 20/54 (37%)
Frame = -1
Query: 528 GXXPPPPXXGGGPXXRXXFXXXGGPPPXXWFPXPXXXPPXXXFXFPPPXXXXGG 367
G PPPP GG P F PPP P PP F PPP G
Sbjct: 72 GFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIP---PPPPMFGAPPPPPPPSG 122
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = -1
Query: 528 GXXPPPPXXGGGPXXRXXFXXXGGPPPXXWFPXPXXXPPXXXFXFPP 388
G PPPP G G PPP F P PP P
Sbjct: 81 GGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAP 127
Score = 25.8 bits (54), Expect(2) = 1.7
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 493 PPPPXRGGRXXPPP 534
PPPP GG PPP
Sbjct: 96 PPPPMMGGIPPPPP 109
Score = 23.0 bits (47), Expect(2) = 1.7
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = +1
Query: 235 KEXPPPXXGXXKKXNXXXXPPXXXPPPXXXXREPKXXGXPXXXGPPPXXXXGG 393
K+ PP G P PPP P G P PPP GG
Sbjct: 44 KQAPPS--GILPPGQSIPKPSFFIPPPVPNGFIPPPPG-PGGIPPPPPMFAGG 93
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 34.3 bits (75), Expect = 0.12
Identities = 22/66 (33%), Positives = 22/66 (33%), Gaps = 3/66 (4%)
Frame = -1
Query: 528 GXXPPPPXXGGGPXXRXXF---XXXGGPPPXXWFPXPXXXPPXXXFXFPPPXXXXGGXPX 358
G PPPP G P R G PPP P PP PPP G P
Sbjct: 253 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPP----PPAGGSPPPPRAGSPPPPPPPRGSPP 308
Query: 357 XGXXXP 340
G P
Sbjct: 309 TGSLPP 314
Score = 32.7 bits (71), Expect = 0.36
Identities = 22/63 (34%), Positives = 22/63 (34%)
Frame = -1
Query: 528 GXXPPPPXXGGGPXXRXXFXXXGGPPPXXWFPXPXXXPPXXXFXFPPPXXXXGGXPXXGX 349
G PPPP G P R G PPP P P PP PP G P G
Sbjct: 278 GSPPPPPAGGSPPPPR-----AGSPPPP---PPPRGSPPTGSL---PPPQAGGSPPPAGT 326
Query: 348 XXP 340
P
Sbjct: 327 GSP 329
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 2/58 (3%)
Frame = -1
Query: 528 GXXPPPPXXGGGPXXRXXFXXXGGPPPXXWFPXP--XXXPPXXXFXFPPPXXXXGGXP 361
G PPPP G P PPP P P PP PPP G P
Sbjct: 235 GSPPPPPPPKGSPPLAG--SGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 290
Score = 29.1 bits (62), Expect = 4.4
Identities = 45/200 (22%), Positives = 46/200 (23%), Gaps = 18/200 (9%)
Frame = +1
Query: 244 PPPXXGXXKKXNXXXXPPXXXPPPXXXXREPKXXGXPXXX--GPPPXXXXGGKXKXXXGG 417
PPP G PP PP P G P G PP GG G
Sbjct: 240 PPPPKGSPPLAGSGSPPP----PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 295
Query: 418 XXXRXXXXXXXXXXXXXXKXTXXXGPPPPXRGGRXXPPP-----*XDXRPXXXXXXXXXA 582
G PPP G PPP + P
Sbjct: 296 SPP-PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSP 354
Query: 583 XXXRPPXXGPXXLG-----------GGGXGGPXXXXXXXXXXXXXXXEXXXGTPRXPQXQ 729
RPP GP GG GGP E G R P
Sbjct: 355 PTGRPPRGGPGKSSEESSESREGPRGGPRGGPRGGPRKSSEESSESREEPRGPRRSPPTG 414
Query: 730 XTXXGXAGGGXPXXPXPXXG 789
G G P P G
Sbjct: 415 SPPTGSPPTGRPPRGSPPTG 434
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 34.3 bits (75), Expect = 0.12
Identities = 22/66 (33%), Positives = 22/66 (33%), Gaps = 3/66 (4%)
Frame = -1
Query: 528 GXXPPPPXXGGGPXXRXXF---XXXGGPPPXXWFPXPXXXPPXXXFXFPPPXXXXGGXPX 358
G PPPP G P R G PPP P PP PPP G P
Sbjct: 274 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPP----PPAGGSPPPPRAGSPPPPPPPRGSPP 329
Query: 357 XGXXXP 340
G P
Sbjct: 330 TGSLPP 335
Score = 32.7 bits (71), Expect = 0.36
Identities = 22/63 (34%), Positives = 22/63 (34%)
Frame = -1
Query: 528 GXXPPPPXXGGGPXXRXXFXXXGGPPPXXWFPXPXXXPPXXXFXFPPPXXXXGGXPXXGX 349
G PPPP G P R G PPP P P PP PP G P G
Sbjct: 299 GSPPPPPAGGSPPPPR-----AGSPPPP---PPPRGSPPTGSL---PPPQAGGSPPPAGT 347
Query: 348 XXP 340
P
Sbjct: 348 GSP 350
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 2/58 (3%)
Frame = -1
Query: 528 GXXPPPPXXGGGPXXRXXFXXXGGPPPXXWFPXP--XXXPPXXXFXFPPPXXXXGGXP 361
G PPPP G P PPP P P PP PPP G P
Sbjct: 256 GSPPPPPPPKGSPPLAG--SGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 311
Score = 29.1 bits (62), Expect = 4.4
Identities = 45/200 (22%), Positives = 46/200 (23%), Gaps = 18/200 (9%)
Frame = +1
Query: 244 PPPXXGXXKKXNXXXXPPXXXPPPXXXXREPKXXGXPXXX--GPPPXXXXGGKXKXXXGG 417
PPP G PP PP P G P G PP GG G
Sbjct: 261 PPPPKGSPPLAGSGSPPP----PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 316
Query: 418 XXXRXXXXXXXXXXXXXXKXTXXXGPPPPXRGGRXXPPP-----*XDXRPXXXXXXXXXA 582
G PPP G PPP + P
Sbjct: 317 SPP-PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSP 375
Query: 583 XXXRPPXXGPXXLG-----------GGGXGGPXXXXXXXXXXXXXXXEXXXGTPRXPQXQ 729
RPP GP GG GGP E G R P
Sbjct: 376 PTGRPPRGGPGKSSEESSESREGPRGGPRGGPRGGPRKSSEESSESREEPRGPRRSPPTG 435
Query: 730 XTXXGXAGGGXPXXPXPXXG 789
G G P P G
Sbjct: 436 SPPTGSPPTGRPPRGSPPTG 455
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 34.3 bits (75), Expect = 0.12
Identities = 22/66 (33%), Positives = 22/66 (33%), Gaps = 3/66 (4%)
Frame = -1
Query: 528 GXXPPPPXXGGGPXXRXXF---XXXGGPPPXXWFPXPXXXPPXXXFXFPPPXXXXGGXPX 358
G PPPP G P R G PPP P PP PPP G P
Sbjct: 259 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPP----PPAGGSPPPPRAGSPPPPPPPRGSPP 314
Query: 357 XGXXXP 340
G P
Sbjct: 315 TGSLPP 320
Score = 32.7 bits (71), Expect = 0.36
Identities = 22/63 (34%), Positives = 22/63 (34%)
Frame = -1
Query: 528 GXXPPPPXXGGGPXXRXXFXXXGGPPPXXWFPXPXXXPPXXXFXFPPPXXXXGGXPXXGX 349
G PPPP G P R G PPP P P PP PP G P G
Sbjct: 284 GSPPPPPAGGSPPPPR-----AGSPPPP---PPPRGSPPTGSL---PPPQAGGSPPPAGT 332
Query: 348 XXP 340
P
Sbjct: 333 GSP 335
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 2/58 (3%)
Frame = -1
Query: 528 GXXPPPPXXGGGPXXRXXFXXXGGPPPXXWFPXP--XXXPPXXXFXFPPPXXXXGGXP 361
G PPPP G P PPP P P PP PPP G P
Sbjct: 241 GSPPPPPPPKGSPPLAG--SGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 296
Score = 29.1 bits (62), Expect = 4.4
Identities = 45/200 (22%), Positives = 46/200 (23%), Gaps = 18/200 (9%)
Frame = +1
Query: 244 PPPXXGXXKKXNXXXXPPXXXPPPXXXXREPKXXGXPXXX--GPPPXXXXGGKXKXXXGG 417
PPP G PP PP P G P G PP GG G
Sbjct: 246 PPPPKGSPPLAGSGSPPP----PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 301
Query: 418 XXXRXXXXXXXXXXXXXXKXTXXXGPPPPXRGGRXXPPP-----*XDXRPXXXXXXXXXA 582
G PPP G PPP + P
Sbjct: 302 SPP-PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSP 360
Query: 583 XXXRPPXXGPXXLG-----------GGGXGGPXXXXXXXXXXXXXXXEXXXGTPRXPQXQ 729
RPP GP GG GGP E G R P
Sbjct: 361 PTGRPPRGGPGKSSEESSESREGPRGGPRGGPRGGPRKSSEESSESREEPRGPRRSPPTG 420
Query: 730 XTXXGXAGGGXPXXPXPXXG 789
G G P P G
Sbjct: 421 SPPTGSPPTGRPPRGSPPTG 440
>Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical
protein T07C4.9b protein.
Length = 455
Score = 31.1 bits (67), Expect = 1.1
Identities = 23/79 (29%), Positives = 28/79 (35%), Gaps = 6/79 (7%)
Frame = +2
Query: 311 PXXXXNGNQXGXXXPXXGXPPXXXXGGGKXKXXXGGXXXGXGN---XXXGGGPPXXKKXX 481
P N NQ G P G P GG + G G G+ GG PP ++
Sbjct: 50 PYPGSNSNQGGGGYPGQGGAPYPGGSGGYPQAPQYGFSGGQGSAPQPNQGGYPPQQQQYP 109
Query: 482 RXXG---PPPXKGGGGXXP 529
G +GGGG P
Sbjct: 110 PQQGYQQGGQQQGGGGFFP 128
>Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical
protein T07C4.9a protein.
Length = 497
Score = 31.1 bits (67), Expect = 1.1
Identities = 23/79 (29%), Positives = 28/79 (35%), Gaps = 6/79 (7%)
Frame = +2
Query: 311 PXXXXNGNQXGXXXPXXGXPPXXXXGGGKXKXXXGGXXXGXGN---XXXGGGPPXXKKXX 481
P N NQ G P G P GG + G G G+ GG PP ++
Sbjct: 92 PYPGSNSNQGGGGYPGQGGAPYPGGSGGYPQAPQYGFSGGQGSAPQPNQGGYPPQQQQYP 151
Query: 482 RXXG---PPPXKGGGGXXP 529
G +GGGG P
Sbjct: 152 PQQGYQQGGQQQGGGGFFP 170
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 5/56 (8%)
Frame = +2
Query: 368 PPXXXXGGGKXKXXXGGXXXGXGNXXXGGGPPXXKK-----XXRXXGPPPXKGGGG 520
PP GGG + GG G+ GG P + GPPP +GG G
Sbjct: 154 PPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPG 209
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 5/56 (8%)
Frame = +2
Query: 368 PPXXXXGGGKXKXXXGGXXXGXGNXXXGGGPPXXKK-----XXRXXGPPPXKGGGG 520
PP GGG + GG G+ GG P + GPPP +GG G
Sbjct: 434 PPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPG 489
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/98 (22%), Positives = 24/98 (24%), Gaps = 1/98 (1%)
Frame = +1
Query: 244 PPPXXGXXKKXNXXXXPPXXXPPPXXXXREPKXXGXPXXXGPPPXXXXGGKXKXXXGGXX 423
PPP PP P G P PPP + GG
Sbjct: 351 PPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYG 410
Query: 424 XRXXXXXXXXXXXXXXKX-TXXXGPPPPXRGGRXXPPP 534
+ GPPPP G PPP
Sbjct: 411 PPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPP 448
>Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical
protein B0285.1 protein.
Length = 730
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 1/46 (2%)
Frame = -1
Query: 519 PPPPXXGGGPXXRXXFXXXGGP-PPXXWFPXPXXXPPXXXFXFPPP 385
PPPP P P PP F P PP F PPP
Sbjct: 189 PPPPSFNINPFQPMFSQPPPPPLPPNSQFMTPPPRPPPAPFSIPPP 234
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/53 (37%), Positives = 21/53 (39%)
Frame = +2
Query: 362 GXPPXXXXGGGKXKXXXGGXXXGXGNXXXGGGPPXXKKXXRXXGPPPXKGGGG 520
G PP G G GG G G+ GGG R PPP GGGG
Sbjct: 179 GLPPSNDFGPG---GGGGGMGGGGGSGGSGGGS------GRFPPPPPPYGGGG 222
>Z69383-11|CAM06588.1| 110|Caenorhabditis elegans Hypothetical
protein F13E9.15 protein.
Length = 110
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = +2
Query: 287 PXPPXXXRPXXXXNGNQXGXXXPXXGXPPXXXXGGGKXKXXXGGXXXGXGNXXXGGG 457
P PP +P G Q P G P GG G G GN GGG
Sbjct: 44 PQPPQPGQP-----GGQQTGSGPGAGQQPGQGQGGNGGMGGQQGGQPGQGNGGMGGG 95
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 5.8
Identities = 22/97 (22%), Positives = 24/97 (24%)
Frame = +1
Query: 244 PPPXXGXXKKXNXXXXPPXXXPPPXXXXREPKXXGXPXXXGPPPXXXXGGKXKXXXGGXX 423
PPP G + PP PPP P P PP G
Sbjct: 245 PPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPP 304
Query: 424 XRXXXXXXXXXXXXXXKXTXXXGPPPPXRGGRXXPPP 534
R + PP GG PPP
Sbjct: 305 GRTPGPPGMPGMPPPPPPSRFG---PPGMGGMPPPPP 338
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 5.8
Identities = 22/97 (22%), Positives = 24/97 (24%)
Frame = +1
Query: 244 PPPXXGXXKKXNXXXXPPXXXPPPXXXXREPKXXGXPXXXGPPPXXXXGGKXKXXXGGXX 423
PPP G + PP PPP P P PP G
Sbjct: 255 PPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPP 314
Query: 424 XRXXXXXXXXXXXXXXKXTXXXGPPPPXRGGRXXPPP 534
R + PP GG PPP
Sbjct: 315 GRTPGPPGMPGMPPPPPPSRFG---PPGMGGMPPPPP 348
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 4/48 (8%)
Frame = +2
Query: 389 GGKXKXXXGGXXXGXGNXXXGGGPPXXKKXXRXXGP----PPXKGGGG 520
GG GG GN GGPP + + GP PP GG G
Sbjct: 133 GGYDGERRGGSRWDDGNSDRQGGPPGGRGGYQDRGPRRDGPPSGGGYG 180
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/55 (36%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Frame = -1
Query: 528 GXXPPPPXXGGGPXXRXXFXXXGGPPPXXWFPXPXXXPPXXXFXFPP-PXXXXGG 367
G PPPP G P F G PPP P P F PP P GG
Sbjct: 294 GFFPPPPR-GHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGG 347
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/55 (36%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Frame = -1
Query: 528 GXXPPPPXXGGGPXXRXXFXXXGGPPPXXWFPXPXXXPPXXXFXFPP-PXXXXGG 367
G PPPP G P F G PPP P P F PP P GG
Sbjct: 294 GFFPPPPR-GHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGG 347
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 24.6 bits (51), Expect(2) = 6.7
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 641 PPXPPPPXKXGP 606
PP PPPP K P
Sbjct: 26 PPPPPPPPKPAP 37
Score = 22.2 bits (45), Expect(2) = 6.7
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -2
Query: 650 PXGPPXPPPP 621
P PP PPPP
Sbjct: 24 PQPPPPPPPP 33
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = +2
Query: 386 GGGKXKXXXGGXXXGXGNXXXGGGPPXXKKXXRXXGPPPXKGGG 517
GGG GG G G GGG + GPP GGG
Sbjct: 117 GGGNNDGGWGGNNGGGGGGRGGGG-----RGGDGRGPPGSNGGG 155
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,045,188
Number of Sequences: 27780
Number of extensions: 214113
Number of successful extensions: 1663
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1290
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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