Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_I01
         (873 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_05_0039 - 8461234-8461368,8461502-8461639,8461743-8461865           82   7e-16
10_05_0037 + 8451675-8451797,8451901-8452038,8452163-8452297           82   7e-16
06_01_0373 + 2689317-2689439,2690597-2690734,2691616-2691750           78   8e-15
03_05_0377 + 23613181-23613342,23614469-23614501,23614606-236148...    32   0.52 
03_02_0275 + 7042433-7042732,7042864-7043140,7043751-7044231,704...    31   1.6  
05_03_0218 - 10437377-10437622,10437896-10438141,10438528-104386...    30   2.1  
11_02_0134 - 8681176-8681193,8681452-8681987,8682028-8682544           28   8.5  

>10_05_0039 - 8461234-8461368,8461502-8461639,8461743-8461865
          Length = 131

 Score = 81.8 bits (193), Expect = 7e-16
 Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
 Frame = +1

Query: 193 VTKAAIAGHAGNVWAKSEGF-EISKAXVAKXVAGFEXESLLTSGGVXIAGTRYIYLSGTD 369
           +T AAI GH G VWA+S  F +     +   +  F+    L   G+ +  T+Y+ + G  
Sbjct: 20  LTSAAIVGHDGTVWAQSAAFPQFKPEEMTNIMKDFDEPGFLAPTGLFLGPTKYMVIQGEP 79

Query: 370 H-IIRAKLGKVGVHCMKTQQAVVISLYEEPIQPQQAASVVEKLGEYLITCG 519
             +IR K G  G+   KT QA+V+ +Y+EP+ P Q   VVE+LG+YL+  G
Sbjct: 80  GAVIRGKKGSGGITVKKTGQALVVGIYDEPMTPGQCNMVVERLGDYLVEQG 130


>10_05_0037 + 8451675-8451797,8451901-8452038,8452163-8452297
          Length = 131

 Score = 81.8 bits (193), Expect = 7e-16
 Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
 Frame = +1

Query: 193 VTKAAIAGHAGNVWAKSEGF-EISKAXVAKXVAGFEXESLLTSGGVXIAGTRYIYLSGTD 369
           +T AAI GH G VWA+S  F +     +   +  F+    L   G+ +  T+Y+ + G  
Sbjct: 20  LTSAAIVGHDGTVWAQSAAFPQFKPEEMTNIMKDFDEPGFLAPTGLFLGPTKYMVIQGEP 79

Query: 370 H-IIRAKLGKVGVHCMKTQQAVVISLYEEPIQPQQAASVVEKLGEYLITCG 519
             +IR K G  G+   KT QA+V+ +Y+EP+ P Q   VVE+LG+YL+  G
Sbjct: 80  GAVIRGKKGSGGITVKKTGQALVVGIYDEPMTPGQCNMVVERLGDYLVEQG 130


>06_01_0373 + 2689317-2689439,2690597-2690734,2691616-2691750
          Length = 131

 Score = 78.2 bits (184), Expect = 8e-15
 Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 2/111 (1%)
 Frame = +1

Query: 193 VTKAAIAGHAGNVWAKSEGF-EISKAXVAKXVAGFEXESLLTSGGVXIAGTRYIYLSGTD 369
           +T AAI GH G+VWA+S  F +     +   +  F+    L   G+ + GT+Y+ + G  
Sbjct: 20  LTAAAIVGHDGSVWAQSPNFPQYKPEEITGIMKDFDEPGSLAPTGLFLGGTKYMVIQGEP 79

Query: 370 HI-IRAKLGKVGVHCMKTQQAVVISLYEEPIQPQQAASVVEKLGEYLITCG 519
            + IR K G  G+   KT  ++++ +Y+EP+ P Q   +VE+LG+YLI  G
Sbjct: 80  GVVIRGKKGTGGICVKKTGLSLILGIYDEPMTPGQCNMIVERLGDYLIEQG 130


>03_05_0377 +
           23613181-23613342,23614469-23614501,23614606-23614879,
           23615105-23615585,23616174-23616846
          Length = 540

 Score = 32.3 bits (70), Expect = 0.52
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +3

Query: 180 GISLCHKSCHCRSCWQCVGKVGRLRNFKSXSGKXC 284
           G +L H  C    CW C G  GR   + S SG  C
Sbjct: 304 GCNLVHCKCGQCLCWLCGGPTGREHTWDSISGHSC 338


>03_02_0275 +
           7042433-7042732,7042864-7043140,7043751-7044231,
           7044943-7045491,7045556-7045680,7045824-7045966
          Length = 624

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = +3

Query: 180 GISLCHKSCHCRSCWQCVGKVGRLRNFKSXSGKXCG 287
           G +L    C    CW C G  GR   + S SG  CG
Sbjct: 340 GCNLVACICGQAFCWLCGGATGRDHTWSSISGHSCG 375


>05_03_0218 -
           10437377-10437622,10437896-10438141,10438528-10438611,
           10438720-10438854
          Length = 236

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
 Frame = +3

Query: 357 QWHRPYHPRE-AWQ--GRRALHEDTASCGHFSL*RTHPTSAGRICRGEVRRIFNYLWLLE 527
           +W R Y P    W+  GRRA   D       S+  T PT  GR+   E  +I ++++LLE
Sbjct: 33  KWRRQYRPESICWEYEGRRAYIADYLDAKGRSILITKPTIKGRVSGKE--QIKHFVYLLE 90


>11_02_0134 - 8681176-8681193,8681452-8681987,8682028-8682544
          Length = 356

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -1

Query: 237 CPHIASMTGNGSFCD 193
           C HI+SM G+G FCD
Sbjct: 12  CLHISSMHGHGGFCD 26


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,398,669
Number of Sequences: 37544
Number of extensions: 382115
Number of successful extensions: 781
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 777
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)