Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_H24
         (889 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1531 + 27515829-27516046,27516238-27516451,27517223-275173...    29   6.5  
03_02_0055 - 5295466-5295476,5295519-5296635,5296760-5296855,529...    29   6.5  
09_06_0147 + 21195222-21195377,21195471-21195522,21196842-212043...    28   8.6  
08_02_1171 + 24880363-24881355,24882553-24882702,24883505-248842...    28   8.6  

>07_03_1531 +
           27515829-27516046,27516238-27516451,27517223-27517327,
           27517432-27517830
          Length = 311

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = -3

Query: 452 FYSCRVR-FRLANTATNTPRIPTPKTDTFCRLFPLHYLHY 336
           FY C    F++A   T+ P    P  DT C L   HY H+
Sbjct: 170 FYDCAFYGFQMACERTHGPDPLPPLQDTLCDLKGRHYFHH 209


>03_02_0055 -
           5295466-5295476,5295519-5296635,5296760-5296855,
           5297097-5297263,5297345-5297519,5297521-5297699,
           5298004-5298109
          Length = 616

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = +2

Query: 407 LWRCSRAEIGHDMNKISQQLILDMSDVMDLATPNYSTPIINTTYVASLQ 553
           L + + AEI  D+ K+  + IL M++   +  PN + P + T YVA L+
Sbjct: 400 LGKDASAEIFRDVAKLDSKPILFMNEFNTIEEPNDAAP-LPTKYVAKLK 447


>09_06_0147 + 21195222-21195377,21195471-21195522,21196842-21204362,
            21204453-21205031,21205176-21205484,21205638-21205718,
            21205971-21206279,21207430-21207816,21207964-21208767,
            21208856-21209218,21209437-21209667,21209934-21210278,
            21210494-21210712,21210759-21210815,21210978-21211322,
            21211538-21211756,21211803-21211859,21212022-21212366,
            21212584-21212814,21213100-21213458
          Length = 4322

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -1

Query: 469  DQLLADFIHVVSDFGSRTPPQTHPEYRHQKPTHFA 365
            D+ +A F+H   D G+++P  THP+   + P H A
Sbjct: 3310 DKPIARFLH---DQGAQSPELTHPQQPPESPPHSA 3341


>08_02_1171 +
           24880363-24881355,24882553-24882702,24883505-24884210,
           24885012-24885404,24885759-24885805,24886088-24886111
          Length = 770

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -2

Query: 435 PISAREHRHKHTQNTDTKNRHILPAVPVTLFTLLA 331
           P+    H H H  + + + R I+P V + +F + A
Sbjct: 90  PVRTYHHHHHHNNSNNHRLRRIIPRVLLAVFAIYA 124


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,058,481
Number of Sequences: 37544
Number of extensions: 483389
Number of successful extensions: 1102
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1102
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)