Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_H22
(889 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0985 - 22042801-22042963,22043019-22043138,22043261-220435... 152 3e-37
08_02_0162 + 13464698-13464974,13465719-13465837,13465920-134665... 38 0.014
06_03_0614 - 22753092-22753349,22754059-22754277,22754712-227549... 38 0.014
04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276 36 0.033
10_08_0254 + 16236689-16236793,16237760-16237808,16237988-162380... 33 0.23
04_04_0435 - 25170348-25170593,25170989-25171189,25171580-251717... 33 0.23
03_02_0555 + 9431451-9431688,9432685-9432803,9432886-9433079,943... 32 0.53
04_03_0812 - 19922208-19922357,19922448-19922564,19922681-199227... 31 0.93
05_01_0290 + 2270749-2271037,2272227-2272363,2272660-2272805,227... 31 1.6
09_03_0087 - 12237226-12237346,12237423-12237555,12237641-122377... 30 2.1
10_08_0747 - 20272157-20272456,20272538-20272664,20272770-202728... 29 3.7
07_03_1316 + 25736931-25737206,25737276-25737329,25738036-257381... 29 3.7
07_03_0973 + 23053441-23054295 29 3.7
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 29 3.7
09_04_0323 - 16679565-16679939,16680328-16680660,16680721-166810... 29 4.9
04_03_0481 + 16433648-16433746,16435136-16435394,16435883-164362... 29 4.9
03_05_0066 - 20455976-20456161,20456251-20456347,20456608-204567... 29 4.9
07_01_0688 - 5211484-5211626,5211730-5211826,5211930-5212105,521... 28 8.6
06_03_1176 - 28172230-28172547,28172691-28172849,28172962-28174194 28 8.6
05_04_0383 - 20801036-20801309,20801413-20801538,20801706-208017... 28 8.6
02_05_0796 + 31800256-31800528,31800635-31800758,31802642-318027... 28 8.6
>10_08_0985 -
22042801-22042963,22043019-22043138,22043261-22043562,
22044055-22044351,22044448-22044556,22044826-22045358,
22045446-22045644,22045741-22045865,22045937-22046020,
22046093-22046221,22046337-22046465,22046593-22046739,
22047106-22047346,22047859-22047980
Length = 899
Score = 152 bits (369), Expect = 3e-37
Identities = 85/207 (41%), Positives = 117/207 (56%), Gaps = 4/207 (1%)
Frame = +2
Query: 260 GYENVVVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNE--YYPTT-ENGLTTGYIFLEY 430
G+ NVVVVD P V PE+ EKL++VI KI+S+ G I + P E T GY F+EY
Sbjct: 58 GFANVVVVDNLPVVPPEKFEKLENVIRKIYSQIGAIKEGGLWMPVNPETKKTYGYCFIEY 117
Query: 431 SNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFQKYSDIPKEWEPPAPQPFKVQSDLQWYL 610
+ PQ A A + TN KLDK H F VN+F DF KY +P EW P +P+ +LQ +L
Sbjct: 118 NTPQEAELAREKTNGYKLDKSHIFAVNMFDDFDKYMKVPDEWMPAEIKPYTPGENLQKWL 177
Query: 611 MDPDAYDQFLGWHWDWCGSPGVAECIT*TPWLLQERPNWTETYAVWSPLGTYLATFHWRG 790
D A DQF+ + + P L+ ++ WT+++ WSPLGTYLAT H +G
Sbjct: 178 ADEKARDQFVIRAGTFT-EVYWNDARQKMPELVFQKQYWTDSFIQWSPLGTYLATVHRQG 236
Query: 791 VALWAG-PKFSQFQKFSTLKLGYIIFS 868
+W G KF + +F+ ++ I FS
Sbjct: 237 SQVWGGDDKFERLMRFAHAQVKLIDFS 263
>08_02_0162 +
13464698-13464974,13465719-13465837,13465920-13466579,
13466686-13466763,13466849-13466938,13467241-13467378,
13467730-13467738
Length = 456
Score = 37.5 bits (83), Expect = 0.014
Identities = 21/96 (21%), Positives = 43/96 (44%)
Frame = +2
Query: 335 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 514
+ +IF KFG I + +G + + F+ + NP +AA AV+ N K D + ++
Sbjct: 234 LKEIFGKFGPITSVVVMREGDGKSRCFGFVNFENPDDAARAVEDLNGKKFDDKEWYVCRA 293
Query: 515 FTDFQKYSDIPKEWEPPAPQPFKVQSDLQWYLMDPD 622
++ ++ +++E + YL + D
Sbjct: 294 QKKSEREMELKEKFEKNIKEAADKNQGTNLYLKNLD 329
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 344 IFSKFGKIVNEYYPTTENG-LTTGYIFLEYSNPQNAAEAVKATN 472
+FS+ G +V+ N L+ GY ++ +S+P +AA A++ N
Sbjct: 58 VFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEMLN 101
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +2
Query: 347 FSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFL 505
FS FG I++ T +G + GY F+++ + A A+ N L+ + ++
Sbjct: 147 FSVFGNILSCKVATEMSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYV 199
>06_03_0614 -
22753092-22753349,22754059-22754277,22754712-22754960,
22755186-22755275,22755379-22755456,22755562-22756337,
22757042-22757384
Length = 670
Score = 37.5 bits (83), Expect = 0.014
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +2
Query: 341 KIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNLF 517
++FS FG I++ T NG + GY F+++ + +A +A+ N + Q F V LF
Sbjct: 167 EMFSSFGTILSSKVATDFNGKSKGYGFIQFESESSAKDAINGLNGMLANGQKIF-VGLF 224
Score = 35.5 bits (78), Expect = 0.057
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 2/115 (1%)
Frame = +2
Query: 347 FSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNLFTDF 526
FS FG I + NGL+ + F+ + + A AVK N + ++
Sbjct: 260 FSSFGAITSAIVMRDANGLSRCFGFVNFEKSECARNAVKNLNGKSIGDMVLYVARAQKKS 319
Query: 527 QKYSDIPKEWEPPAPQPFKVQSDLQWYL--MDPDAYDQFLGWHWDWCGSPGVAEC 685
++ +++ ++E Q F+ + YL +D D D+ L ++ G VA C
Sbjct: 320 ERQAELKAKFEHDKNQKFEKLQTVNLYLKNLDDDINDEHLRKLFECFGE--VASC 372
>04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276
Length = 924
Score = 36.3 bits (80), Expect = 0.033
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +2
Query: 344 IFSKFGKIVNEYYPTTEN-GLTTGYIFLEYSNPQNAAEAVKATNNCKLD 487
+F FG++ N GL+ GY F++YS+P +AAEAV N +D
Sbjct: 323 LFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVD 371
Score = 35.9 bits (79), Expect = 0.043
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +2
Query: 341 KIFSKFGKIV-NEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATN 472
++F FG+IV + GL+ GY F++YS+P+ A+EA+K N
Sbjct: 227 ELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAIKRMN 271
>10_08_0254 +
16236689-16236793,16237760-16237808,16237988-16238076,
16238178-16238234,16238684-16238746,16238828-16238893,
16239520-16239606,16239691-16239784,16240351-16240673,
16241022-16241048,16241065-16241145,16241445-16241476,
16242126-16242266,16242455-16242516,16243170-16243387
Length = 497
Score = 33.5 bits (73), Expect = 0.23
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 284 DGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAV 460
D VG + + ++ ++F + G +VN Y P L GY F+E+ + ++A A+
Sbjct: 24 DATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
Query: 461 KATNNCKL 484
K N KL
Sbjct: 84 KILNMIKL 91
>04_04_0435 -
25170348-25170593,25170989-25171189,25171580-25171756,
25172284-25172418,25173131-25173262,25173292-25173369,
25173452-25174108,25174210-25174328,25175897-25176173
Length = 673
Score = 33.5 bits (73), Expect = 0.23
Identities = 15/57 (26%), Positives = 31/57 (54%)
Frame = +2
Query: 335 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFL 505
++ FS FG I++ T E G + G+ F++Y + A A+K+ N ++ + ++
Sbjct: 143 LHDTFSAFGNILSCKVATDEMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYV 199
>03_02_0555 +
9431451-9431688,9432685-9432803,9432886-9433079,
9433174-9433430,9433544-9433650,9433715-9433888,
9434359-9434490,9434776-9434955,9435062-9435265
Length = 534
Score = 32.3 bits (70), Expect = 0.53
Identities = 13/47 (27%), Positives = 29/47 (61%)
Frame = +2
Query: 335 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNN 475
+ ++F KFG I++ E+G + GY F++++ ++A +++ NN
Sbjct: 130 LQELFCKFGDILSCKVAKNEDGTSRGYGFVQFALQESADASIQNLNN 176
>04_03_0812 -
19922208-19922357,19922448-19922564,19922681-19922752,
19922864-19923993,19924939-19925008,19925125-19925199
Length = 537
Score = 31.5 bits (68), Expect = 0.93
Identities = 20/78 (25%), Positives = 40/78 (51%)
Frame = +2
Query: 242 KPKESDGYENVVVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIF 421
K ++SDG+E+ ++ ++ ++ + + K G +V ++ +NGL G +
Sbjct: 52 KHEKSDGHEDYGLL---VSEKAKKYAIIKELDEPVTLKDGTVVLQFEVRLQNGLECGGAY 108
Query: 422 LEYSNPQNAAEAVKATNN 475
L+Y PQ+AA K +N
Sbjct: 109 LKYIRPQDAAWDAKEFDN 126
>05_01_0290 +
2270749-2271037,2272227-2272363,2272660-2272805,
2272853-2272877
Length = 198
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 317 EKLQSVINKIFSKFGKIVNEYYPTTEN-GLTTGYIFLEYSNPQNAAEAVKATNNCKL 484
E + ++ IF FG++ N + G GY +EY + A A+KA + +L
Sbjct: 111 EAQEDDLHNIFRDFGQVKNLHLNLDRRTGFVKGYALIEYETFEEAQAAIKALDGTEL 167
>09_03_0087 -
12237226-12237346,12237423-12237555,12237641-12237730,
12238992-12239198,12239738-12239813,12240019-12240148,
12241024-12241121
Length = 284
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +2
Query: 290 CPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTE 394
CP +GP ++K+ V+ + SK+G + + T +
Sbjct: 152 CPDIGPAEVQKMADVVKLLESKYGTKITPLFITID 186
>10_08_0747 - 20272157-20272456,20272538-20272664,20272770-20272843,
20272928-20272971,20273697-20276223
Length = 1023
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +2
Query: 326 QSVINKIFSKFGKIVNE----YYPTTENGLTTGYIFLEYSNPQNAAEAVKATN 472
+S I K+FS FGKI+ E + + G GY F++Y+ + A A + N
Sbjct: 882 ESDIIKMFSPFGKIIAEDFLWHTRGPKRGEPRGYAFVQYTTKEEAQLAKEKMN 934
>07_03_1316 +
25736931-25737206,25737276-25737329,25738036-25738189,
25740235-25740313,25740413-25740492,25740588-25740654,
25741548-25741619,25742071-25742223,25742309-25742392,
25742811-25742877
Length = 361
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 335 INKIFSKFGKIVNEYYP-TTENGLTTGYIFLEYSNPQNAAEAV 460
++ +F K+G++V+ Y P G + G+ F+ Y A +AV
Sbjct: 168 LSPLFEKYGEVVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAV 210
>07_03_0973 + 23053441-23054295
Length = 284
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/24 (58%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = -2
Query: 714 SCNSQ-GVQVMHSATPGEPHQSQC 646
SC SQ GVQV HS++PG + QC
Sbjct: 6 SCLSQSGVQVAHSSSPGGQNMVQC 29
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 344 IFSKFGKIVN-EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLD 487
+FS+FG+IV + G + GY F++YS+ A A+ A N L+
Sbjct: 326 LFSQFGEIVMAKVIRDRITGQSKGYGFVKYSDVSQANAAIAAMNGYHLE 374
>09_04_0323 -
16679565-16679939,16680328-16680660,16680721-16681032,
16683590-16683825,16683972-16684239
Length = 507
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +1
Query: 670 RCGRMHYLNPLAVTGETKLDRNLCRLVTFRNILSNFPLAR 789
R +MHYL P+ V + L RLV R S PL R
Sbjct: 380 RIRKMHYLRPIGVAQQETLRAATVRLVAARLERSETPLGR 419
>04_03_0481 +
16433648-16433746,16435136-16435394,16435883-16436261,
16436498-16436716,16436814-16436949,16437502-16437717,
16437773-16437835
Length = 456
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/48 (29%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Frame = +3
Query: 81 RSSKWLRKKA--MKKRIQLLKVTMRNRILKKNLILTTQRIS*RYLKKN 218
RS +W+R++A +K +++ L T + +++ NL+ QR+ +L K+
Sbjct: 34 RSEEWMRQRAKRLKMKVRTLFWTSNDVVVRMNLVDAVQRLGIGHLFKD 81
>03_05_0066 -
20455976-20456161,20456251-20456347,20456608-20456738,
20456814-20456869,20457498-20457543
Length = 171
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +2
Query: 332 VINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQ 493
V+ + FS +G++V P G G F++YSN +A EA++ N +L Q
Sbjct: 48 VLKQAFSPYGELVYVKIPV---GKRCG--FVQYSNRASAEEAIRMLNGSQLGGQ 96
>07_01_0688 -
5211484-5211626,5211730-5211826,5211930-5212105,
5212240-5212631,5212712-5212960,5213046-5213188,
5213283-5213402,5214491-5214835
Length = 554
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +2
Query: 233 LEQKPKESDGYENVVVVDGCPQVGPERLEKLQSVIN 340
L K KE+D N ++VDG +G +LE++++ I+
Sbjct: 208 LVPKDKEADVINNRLIVDGANGIGGLKLEEIKAKIS 243
>06_03_1176 - 28172230-28172547,28172691-28172849,28172962-28174194
Length = 569
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2
Query: 363 LPNLLNILFITLCSFSRRSGPTCGH 289
LP+L N+ F+TLCS S R+ G+
Sbjct: 394 LPDLSNLTFLTLCSTSLRAVTVAGN 418
>05_04_0383 -
20801036-20801309,20801413-20801538,20801706-20801730,
20801808-20802259,20802330-20802394,20802487-20802711,
20804750-20804878,20805095-20805306,20806861-20806894
Length = 513
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 326 QSVINKIFSKFGKIVNEYYPTT-ENGLTTGYIFLEYSNPQNAAEAVK 463
+ V+ +I + G++V+ + P E + GY F EY + A AVK
Sbjct: 20 ERVLYEILIQVGRVVDLHIPRDKETNRSKGYAFAEYETEEIAQYAVK 66
>02_05_0796 +
31800256-31800528,31800635-31800758,31802642-31802771,
31804336-31804414,31804848-31805133,31805273-31805385
Length = 334
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 347 FSKFGKIVNEYYPTT-ENGLTTGYIFLEYSNPQNAAEAVKATN 472
F ++G+I+ T E + GY F+ + P++A EAV+ N
Sbjct: 66 FQQYGEILEAVVITDRETSRSKGYGFVTFREPESAREAVRNPN 108
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,055,504
Number of Sequences: 37544
Number of extensions: 539285
Number of successful extensions: 1400
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1398
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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