Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_H18
         (887 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0232 - 21737299-21739233                                         28   8.6  
06_02_0086 - 11567390-11567634,11568316-11568341,11571082-115712...    28   8.6  
04_04_0075 - 22542486-22542882,22543181-22543362,22543452-225436...    28   8.6  
02_05_0483 - 29391929-29392256,29393048-29393148,29393640-293938...    28   8.6  
01_07_0125 - 41220550-41220555,41220656-41220725,41220811-41222165     28   8.6  

>09_06_0232 - 21737299-21739233
          Length = 644

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
 Frame = +3

Query: 432 RIGIRGKKWYMPLLTHMIDLAEHNAWQLYKINHGKLDHLGFRRRVAI--ALIESNRKNAK 605
           R GI   ++ +P L      A   AW+   + HG +  LGF  +V +  AL+ S      
Sbjct: 103 RRGILPNEFTLPFLLKAC--ARVQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGS 160

Query: 606 RGPSRPSHHEHADSRKDQMNHLV 674
            G SR    E  D      N ++
Sbjct: 161 LGDSRRFFDEMVDRNVVSWNSMI 183


>06_02_0086 -
           11567390-11567634,11568316-11568341,11571082-11571224,
           11571569-11571682,11571855-11572888,11574723-11575047,
           11576843-11577124
          Length = 722

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
 Frame = -3

Query: 747 HHISCNVSNIFCDIDDSVFASIEE*PDDSFGLYDYQHVHDGRVG*ALFWHFFCLIQSKQL 568
           ++ SCN+  I  ++DD +  + ++       L      HD R   AL   +F      +L
Sbjct: 515 YYYSCNIDGIAYNLDDHILVASKDKESAPSKLQSLWEEHDSRSKMALVSPYFFASDIPEL 574

Query: 567 LPF-CESQDDPVF 532
           +   C ++++ VF
Sbjct: 575 ISKPCTAEENEVF 587


>04_04_0075 -
           22542486-22542882,22543181-22543362,22543452-22543637,
           22543959-22544057,22546198-22546314,22547739-22547855
          Length = 365

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/48 (22%), Positives = 26/48 (54%)
 Frame = -1

Query: 407 PIHSSHIFVIDGHHMWFFYDNVSLFTL*EAFGRLFRIYSYSIRSNTEY 264
           P H  ++ ++  H+ W F+D+ ++  + E+  + F   S+    NT++
Sbjct: 305 PNHGHYVSLVKSHNHWLFFDDENVEMVEESTLQTFFGSSHEYSGNTDH 352


>02_05_0483 -
           29391929-29392256,29393048-29393148,29393640-29393834,
           29394124-29394240,29394376-29394447,29394840-29394950,
           29395029-29395127,29395991-29396047,29396607-29397008,
           29397249-29397303,29397725-29397809,29398023-29398130,
           29398229-29398295,29398717-29398875,29399277-29399405
          Length = 694

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/58 (25%), Positives = 30/58 (51%)
 Frame = -3

Query: 420 YFHQTDPLLPYICYRWTPYVVLL*QCFSFHFVRSVWQIV*DLFLQH*KQY*IYYCHAI 247
           YF + D L  + C+RW   ++   + FSF  +  +W+++   +    + + +Y C AI
Sbjct: 564 YFRKNDCLNYFFCFRWV--LIQFKREFSFDQIMLLWEVLWTHYWS--EHFHLYLCVAI 617


>01_07_0125 - 41220550-41220555,41220656-41220725,41220811-41222165
          Length = 476

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = +3

Query: 72  YLGRPCWK--RXQXKAFVALGQFEXTGHLVVL 161
           Y GRPCW+    Q K F+   + + TG+  +L
Sbjct: 241 YFGRPCWRTLSYQGKLFMVKAKHDITGNSDIL 272


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,541,157
Number of Sequences: 37544
Number of extensions: 409953
Number of successful extensions: 792
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)