Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_H15
(903 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.098
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.098
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.100
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.21
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.1
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 6.0
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect(2) = 0.098
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +2
Query: 689 PPPPXQGGXGXXXXPLQXNHPPPXARGGXXXXXRXXXXXPPPP 817
PPPP GG P+ PPP GG PPPP
Sbjct: 727 PPPPPPGGL----PPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 21.4 bits (43), Expect(2) = 0.098
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 497 APPSXKGGXXPPXPXNXPXXGXPXP 571
A P GG PP P P G P P
Sbjct: 705 ALPPITGGPPPP-PGLPPITGGPPP 728
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect(2) = 0.098
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +2
Query: 689 PPPPXQGGXGXXXXPLQXNHPPPXARGGXXXXXRXXXXXPPPP 817
PPPP GG P+ PPP GG PPPP
Sbjct: 727 PPPPPPGGL----PPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 21.4 bits (43), Expect(2) = 0.098
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 497 APPSXKGGXXPPXPXNXPXXGXPXP 571
A P GG PP P P G P P
Sbjct: 705 ALPPITGGPPPP-PGLPPITGGPPP 728
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect(2) = 0.100
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +2
Query: 689 PPPPXQGGXGXXXXPLQXNHPPPXARGGXXXXXRXXXXXPPPP 817
PPPP GG P+ PPP GG PPPP
Sbjct: 310 PPPPPPGGL----PPITGGPPPPPPPGGLPPISGGPPPPPPPP 348
Score = 21.4 bits (43), Expect(2) = 0.100
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 497 APPSXKGGXXPPXPXNXPXXGXPXP 571
A P GG PP P P G P P
Sbjct: 288 ALPPITGGPPPP-PGLPPITGGPPP 311
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 33.5 bits (73), Expect = 0.21
Identities = 36/143 (25%), Positives = 40/143 (27%), Gaps = 11/143 (7%)
Frame = +2
Query: 500 PPSXKGGXXPPXPXNXPXXGXPXPXXXXKKXFXCXXX--PXXXXXKXTLXXLKKPXXHXX 673
PPS GG PP G P P ++ F P + + H
Sbjct: 301 PPSEYGGYAPPQQQQQQF-GAPPPQGAPQQGFGAPPQGPPQGGPPQGSFGAPPPQQFHAP 359
Query: 674 VXSXF--PPPPXQGGXGXXXXPLQXNHP-----PPXARGGXXXXXRXXXXXPPPPKXKEX 832
F PPPP G P Q P PP A G PPPP
Sbjct: 360 SPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGA 419
Query: 833 XFXXGRP--AXXXXXXXPXGGXG 895
G P P GG G
Sbjct: 420 PGSYGPPQGGPGGFGPPPPGGPG 442
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +2
Query: 689 PPPPXQGGXGXXXXPLQXNHPPPXARGGXXXXXRXXXXXPPPP 817
PPPP G P PPP GG R PPPP
Sbjct: 264 PPPPRTGSP----PPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 302
Score = 25.4 bits (53), Expect(2) = 8.8
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = +2
Query: 689 PPPPXQGGX--GXXXXPLQXNHPPPXARGGXXXXXRXXXXXPPPPKXK 826
PPPP +G G P PPP G PPPP+ K
Sbjct: 299 PPPPPRGSPPTGSLPPPQAGGSPPPAGTGS----------PPPPPRQK 336
Score = 21.0 bits (42), Expect(2) = 8.8
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 488 TGRAPPSXKGGXXPPXPXNXPXXGXPXP 571
TG PP G PP P G P P
Sbjct: 269 TGSPPPPPTGSPPPP-----PAGGSPPP 291
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +2
Query: 689 PPPPXQGGXGXXXXPLQXNHPPPXARGGXXXXXRXXXXXPPPP 817
PPPP G P PPP GG R PPPP
Sbjct: 285 PPPPRTGSP----PPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 323
Score = 25.4 bits (53), Expect(2) = 8.8
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = +2
Query: 689 PPPPXQGGX--GXXXXPLQXNHPPPXARGGXXXXXRXXXXXPPPPKXK 826
PPPP +G G P PPP G PPPP+ K
Sbjct: 320 PPPPPRGSPPTGSLPPPQAGGSPPPAGTGS----------PPPPPRQK 357
Score = 21.0 bits (42), Expect(2) = 8.8
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 488 TGRAPPSXKGGXXPPXPXNXPXXGXPXP 571
TG PP G PP P G P P
Sbjct: 290 TGSPPPPPTGSPPPP-----PAGGSPPP 312
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +2
Query: 689 PPPPXQGGXGXXXXPLQXNHPPPXARGGXXXXXRXXXXXPPPP 817
PPPP G P PPP GG R PPPP
Sbjct: 270 PPPPRTGSP----PPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 308
Score = 25.4 bits (53), Expect(2) = 8.8
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = +2
Query: 689 PPPPXQGGX--GXXXXPLQXNHPPPXARGGXXXXXRXXXXXPPPPKXK 826
PPPP +G G P PPP G PPPP+ K
Sbjct: 305 PPPPPRGSPPTGSLPPPQAGGSPPPAGTGS----------PPPPPRQK 342
Score = 21.0 bits (42), Expect(2) = 8.8
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 488 TGRAPPSXKGGXXPPXPXNXPXXGXPXP 571
TG PP G PP P G P P
Sbjct: 275 TGSPPPPPTGSPPPP-----PAGGSPPP 297
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +2
Query: 689 PPPPXQGGXGXXXXPLQXNHPPPXARGGXXXXXRXXXXXPPPP 817
PPPP G P+ N PPP G PPPP
Sbjct: 505 PPPPLLG-----IAPMSTNAPPPPPMPGMAPLSTGAPTPPPPP 542
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +2
Query: 689 PPPPXQGGXGXXXXPLQXNHPPPXARGGXXXXXRXXXXXPPPP 817
PPPP GG PPP G PPPP
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPP 117
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,327,080
Number of Sequences: 27780
Number of extensions: 178408
Number of successful extensions: 442
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 393
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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