Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_H11
         (890 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X81625-1|CAA57281.1|  437|Homo sapiens C11 protein protein.           246   6e-65
U90176-1|AAB49726.1|  437|Homo sapiens eukaryotic release factor...   246   6e-65
BC088358-1|AAH88358.1|  437|Homo sapiens eukaryotic translation ...   246   6e-65
AF095901-1|AAD43966.1|  437|Homo sapiens eRF1 protein.                246   6e-65
M75715-1|AAA36665.1|  428|Homo sapiens TB3-1 protein.                 244   3e-64
BT007374-1|AAP36038.1|  404|Homo sapiens eukaryotic translation ...   194   5e-49
BC014269-1|AAH14269.1|  404|Homo sapiens ETF1 protein protein.        194   5e-49

>X81625-1|CAA57281.1|  437|Homo sapiens C11 protein protein.
          Length = 437

 Score =  246 bits (603), Expect = 6e-65
 Identities = 125/151 (82%), Positives = 132/151 (87%), Gaps = 1/151 (0%)
 Frame = +2

Query: 434 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIK 613
           + S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLADEFGTASNIK
Sbjct: 4   DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIK 63

Query: 614 SRVNRLSVLGAITSVQHRLXLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTS 793
           SRVNRLSVLGAITSVQ RL LY KVPPNGLV+YCGTIVTEEGKEKKVNIDFEPFKPINTS
Sbjct: 64  SRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTS 123

Query: 794 LYLCDNK-XTPRL*RHCWLMIQVXFIVMDGT 883
           LYLCDNK  T  L        +  FIV+DG+
Sbjct: 124 LYLCDNKFHTEALTALLSDDSKFGFIVIDGS 154


>U90176-1|AAB49726.1|  437|Homo sapiens eukaryotic release factor 1
           protein.
          Length = 437

 Score =  246 bits (603), Expect = 6e-65
 Identities = 125/151 (82%), Positives = 132/151 (87%), Gaps = 1/151 (0%)
 Frame = +2

Query: 434 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIK 613
           + S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLADEFGTASNIK
Sbjct: 4   DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIK 63

Query: 614 SRVNRLSVLGAITSVQHRLXLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTS 793
           SRVNRLSVLGAITSVQ RL LY KVPPNGLV+YCGTIVTEEGKEKKVNIDFEPFKPINTS
Sbjct: 64  SRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTS 123

Query: 794 LYLCDNK-XTPRL*RHCWLMIQVXFIVMDGT 883
           LYLCDNK  T  L        +  FIV+DG+
Sbjct: 124 LYLCDNKFHTEALTALLSDDSKFGFIVIDGS 154


>BC088358-1|AAH88358.1|  437|Homo sapiens eukaryotic translation
           termination factor 1 protein.
          Length = 437

 Score =  246 bits (603), Expect = 6e-65
 Identities = 125/151 (82%), Positives = 132/151 (87%), Gaps = 1/151 (0%)
 Frame = +2

Query: 434 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIK 613
           + S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLADEFGTASNIK
Sbjct: 4   DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIK 63

Query: 614 SRVNRLSVLGAITSVQHRLXLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTS 793
           SRVNRLSVLGAITSVQ RL LY KVPPNGLV+YCGTIVTEEGKEKKVNIDFEPFKPINTS
Sbjct: 64  SRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTS 123

Query: 794 LYLCDNK-XTPRL*RHCWLMIQVXFIVMDGT 883
           LYLCDNK  T  L        +  FIV+DG+
Sbjct: 124 LYLCDNKFHTEALTALLSDDSKFGFIVIDGS 154


>AF095901-1|AAD43966.1|  437|Homo sapiens eRF1 protein.
          Length = 437

 Score =  246 bits (603), Expect = 6e-65
 Identities = 125/151 (82%), Positives = 132/151 (87%), Gaps = 1/151 (0%)
 Frame = +2

Query: 434 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIK 613
           + S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLADEFGTASNIK
Sbjct: 4   DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIK 63

Query: 614 SRVNRLSVLGAITSVQHRLXLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTS 793
           SRVNRLSVLGAITSVQ RL LY KVPPNGLV+YCGTIVTEEGKEKKVNIDFEPFKPINTS
Sbjct: 64  SRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTS 123

Query: 794 LYLCDNK-XTPRL*RHCWLMIQVXFIVMDGT 883
           LYLCDNK  T  L        +  FIV+DG+
Sbjct: 124 LYLCDNKFHTEALTALLSDDSKFGFIVIDGS 154


>M75715-1|AAA36665.1|  428|Homo sapiens TB3-1 protein.
          Length = 428

 Score =  244 bits (597), Expect = 3e-64
 Identities = 124/151 (82%), Positives = 131/151 (86%), Gaps = 1/151 (0%)
 Frame = +2

Query: 434 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIK 613
           + S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLADEFGTASNIK
Sbjct: 4   DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIK 63

Query: 614 SRVNRLSVLGAITSVQHRLXLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTS 793
           SRVNRLSVLGAITSVQ RL LY KVPPNGL +YCGTIVTEEGKEKKVNIDFEPFKPINTS
Sbjct: 64  SRVNRLSVLGAITSVQQRLKLYNKVPPNGLEVYCGTIVTEEGKEKKVNIDFEPFKPINTS 123

Query: 794 LYLCDNK-XTPRL*RHCWLMIQVXFIVMDGT 883
           LYLCDNK  T  L        +  FIV+DG+
Sbjct: 124 LYLCDNKFHTEALTALLSDDSKFGFIVIDGS 154


>BT007374-1|AAP36038.1|  404|Homo sapiens eukaryotic translation
           termination factor 1 protein.
          Length = 404

 Score =  194 bits (472), Expect = 5e-49
 Identities = 99/121 (81%), Positives = 104/121 (85%), Gaps = 1/121 (0%)
 Frame = +2

Query: 524 MISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLSVLGAITSVQHRLXLYTKVPPNGL 703
           MISLIIPPKDQISRV+KMLADEFGTASNIKSRVNRLSVLGAITSVQ RL LY KVPPNGL
Sbjct: 1   MISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGL 60

Query: 704 VIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNK-XTPRL*RHCWLMIQVXFIVMDG 880
           V+YCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNK  T  L        +  FIV+DG
Sbjct: 61  VVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLSDDSKFGFIVIDG 120

Query: 881 T 883
           +
Sbjct: 121 S 121


>BC014269-1|AAH14269.1|  404|Homo sapiens ETF1 protein protein.
          Length = 404

 Score =  194 bits (472), Expect = 5e-49
 Identities = 99/121 (81%), Positives = 104/121 (85%), Gaps = 1/121 (0%)
 Frame = +2

Query: 524 MISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLSVLGAITSVQHRLXLYTKVPPNGL 703
           MISLIIPPKDQISRV+KMLADEFGTASNIKSRVNRLSVLGAITSVQ RL LY KVPPNGL
Sbjct: 1   MISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGL 60

Query: 704 VIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNK-XTPRL*RHCWLMIQVXFIVMDG 880
           V+YCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNK  T  L        +  FIV+DG
Sbjct: 61  VVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLSDDSKFGFIVIDG 120

Query: 881 T 883
           +
Sbjct: 121 S 121


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,392,452
Number of Sequences: 237096
Number of extensions: 2434370
Number of successful extensions: 7712
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7705
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)