Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_H10
(882 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0025 - 19341127-19341339,19341426-19341620,19341912-193420... 32 0.70
04_04_0456 - 25355409-25355751,25356047-25356205,25356317-253565... 32 0.70
02_05_0067 + 25557975-25558553 31 1.2
09_03_0206 + 13485420-13486439 31 1.6
04_03_1002 - 21617339-21617362,21618476-21618565,21618755-216194... 30 2.1
03_05_0402 - 23851755-23851802,23852012-23852022,23853055-23853427 30 2.1
02_03_0246 - 16807619-16808145,16808208-16808868 30 2.8
05_03_0428 + 13899295-13899669 29 3.7
07_03_0039 - 12718972-12720699 29 4.9
05_05_0006 + 21450739-21451434 29 4.9
11_06_0087 - 19919224-19922304 29 6.5
06_01_1010 + 7866158-7866661 29 6.5
05_05_0106 + 22435192-22435614,22436880-22436968,22437617-224378... 29 6.5
03_06_0519 - 34481751-34482722 29 6.5
03_02_0594 - 9695616-9696042,9696646-9697260,9697410-9697717,970... 29 6.5
02_02_0168 + 7364410-7365153 29 6.5
01_04_0068 + 15693131-15693533,15693604-15693803,15693879-156941... 29 6.5
11_01_0066 - 536281-537196,537397-537452 28 8.6
08_01_1010 - 10215625-10216335,10216372-10216473 28 8.6
06_03_0853 - 25384198-25384731,25384810-25385210,25385816-25386011 28 8.6
01_06_0482 - 29672720-29673854,29673941-29676267 28 8.6
>11_06_0025 -
19341127-19341339,19341426-19341620,19341912-19342088,
19342505-19342672,19343533-19343574,19344129-19344214,
19345218-19345545
Length = 402
Score = 31.9 bits (69), Expect = 0.70
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +3
Query: 717 ASPHPPXASCTTTPRSAAARSCTPTTGPATSCTGATXAARWXCXWW 854
A+P PP TP +A+ SC PT PA + + W+
Sbjct: 66 AAPWPPSPPPPRTPSAASTSSCRPTVAPAVPLPPGSQTSLHLSCWY 111
>04_04_0456 -
25355409-25355751,25356047-25356205,25356317-25356513,
25356602-25356794,25357044-25358287
Length = 711
Score = 31.9 bits (69), Expect = 0.70
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +3
Query: 699 ARGCRRASPHPPXASCTTTPRSAAARSCTPTTGP 800
A G +P PP S T TPR+AAA + TP+T P
Sbjct: 237 APGNSTDAPAPPLNS-TATPRAAAAAAATPSTPP 269
>02_05_0067 + 25557975-25558553
Length = 192
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 399 CSPRCTARGRGGSRKHWCWRTCARRGSAPATACAP-WTGSTRA 524
C+P T R SR H C C S P AC+P TGST+A
Sbjct: 40 CNPSGTLRP---SRSHSCQDCCKAGRSYPTYACSPATTGSTKA 79
>09_03_0206 + 13485420-13486439
Length = 339
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/61 (34%), Positives = 24/61 (39%)
Frame = +2
Query: 677 AATRPEHRARLQTGLASPAXRFLHHYTALRRSTLVHADYRTCNLMHRRHXGGALXVXXVD 856
AA RP RL G SPA T + L H+ R C L RR V VD
Sbjct: 75 AAVRPHRARRLSYGTLSPAAGSPCLPTTTHGTLLTHSCDRMCLLSRRRPTDPGCVVVVVD 134
Query: 857 Y 859
+
Sbjct: 135 F 135
>04_03_1002 -
21617339-21617362,21618476-21618565,21618755-21619432,
21619536-21619772,21619849-21619896,21619995-21620045,
21620301-21620426,21620557-21620697,21621165-21621401,
21622467-21622571,21622812-21622982,21623306-21623380,
21623754-21623936,21624151-21624297,21624365-21624472,
21624605-21624709,21625109-21625213,21625322-21625381,
21625512-21625579,21625876-21625954,21626208-21626267,
21626445-21626498,21626834-21626886,21627405-21627494,
21628265-21628362,21628464-21628852
Length = 1193
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 693 STARGCRRASPHPPXASCT-TTPRSAAARSCTPTTG-PATSCTGATXAA 833
S A G R +P A TTP +A ARS TP++G P T + ++ AA
Sbjct: 54 SAAGGGRPTTPSSSSAGGRPTTPSAAFARSTTPSSGRPTTPSSASSRAA 102
>03_05_0402 - 23851755-23851802,23852012-23852022,23853055-23853427
Length = 143
Score = 30.3 bits (65), Expect = 2.1
Identities = 21/64 (32%), Positives = 23/64 (35%)
Frame = +3
Query: 690 PSTARGCRRASPHPPXASCTTTPRSAAARSCTPTTGPATSCTGATXAARWXCXWWTTDGA 869
PS A R H P A P SA A TP T P+ + W C W GA
Sbjct: 46 PSAANHIRIPPQHAP-AGAEVVPPSAGA---TPGTSPSEAEVVPPSTGGWSCVWACPSGA 101
Query: 870 ARQP 881
P
Sbjct: 102 EVVP 105
>02_03_0246 - 16807619-16808145,16808208-16808868
Length = 395
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 690 PSTARGCRRASPHPPXASCTTTPRSAAARSCTPTTGPATS 809
P G RR + P + CTT P +A A + T GP ++
Sbjct: 116 PPCCCGRRRRAASPSASPCTTPPATARAPRTSSTPGPPSA 155
>05_03_0428 + 13899295-13899669
Length = 124
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 429 GGSRKHWCWRTCARRGSAPATAC 497
GGSR+HW T +R +PA C
Sbjct: 78 GGSRRHWTCSTSSRSCRSPAPVC 100
>07_03_0039 - 12718972-12720699
Length = 575
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/28 (60%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -1
Query: 879 AAALHRL*STXXTSSAPP-WWRLCMRLQ 799
AAAL RL ST SSAPP W L RL+
Sbjct: 6 AAALRRLLSTAAASSAPPKLWNLPYRLR 33
>05_05_0006 + 21450739-21451434
Length = 231
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 711 RRASPHPPXASCTTTPRSAAARSCTPTTGPATSCTGATXAARW 839
R S PP +S +TT +AAA + T TTG A++ T + W
Sbjct: 62 RPKSSAPPSSSASTTTTAAAAFTSTSTTG-ASATTVDSSKESW 103
>11_06_0087 - 19919224-19922304
Length = 1026
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/65 (29%), Positives = 25/65 (38%)
Frame = +2
Query: 419 ARSRRLEEALVLEDLRASGFGPRDRLRPVDWEYACAAMEQLARLHALGFALQLQAPEQYE 598
ARS L + LR D DW A A + L LH +L + +Q+
Sbjct: 185 ARSSELSWLARMPSLRHLSLSSVDLSSARDWPLAIAMLPSLTALHLSSCSLPSSSTQQWR 244
Query: 599 RLARR 613
RL R
Sbjct: 245 RLLPR 249
>06_01_1010 + 7866158-7866661
Length = 167
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -3
Query: 127 SRRGAQSWRGPAPQVSVMSGSL 62
+R GA+SWRG AP S GSL
Sbjct: 4 TRAGARSWRGSAPAPSRDGGSL 25
>05_05_0106 +
22435192-22435614,22436880-22436968,22437617-22437814,
22438475-22438679,22438749-22438916,22439095-22439262,
22439344-22439534,22440776-22440879,22441285-22441298
Length = 519
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +3
Query: 420 RGRGGSRKHWCWRTCARRGSAPATACAPWTG 512
RG GGS + RT + GSA A+A A WTG
Sbjct: 33 RGGGGSGR----RTPGKGGSASASAAAGWTG 59
>03_06_0519 - 34481751-34482722
Length = 323
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +3
Query: 690 PSTARGCRRASPHPPXASCTTTPRSAAARSCTPTTGPATSCTGATXAA 833
P+TAR +R + PP P S AR + G + GA AA
Sbjct: 40 PTTARRSKRLAGAPPDHPAEAGPSSTNARRSSRLAGAPPATPGAAAAA 87
>03_02_0594 -
9695616-9696042,9696646-9697260,9697410-9697717,
9700145-9700235,9700698-9700759,9701256-9702962,
9703789-9703870,9703972-9704057,9704855-9704968,
9705113-9705163,9705261-9705358,9707084-9707546
Length = 1367
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +3
Query: 711 RRASPHPPXASCTTTPRSAAARSCTPTTGPATSCTGATXAARW 839
R A P P A + R T TT AT+ T AT A RW
Sbjct: 31 RAAPPRIPSAPAPPAAGGSRYRPTTTTTAAATA-TSATAACRW 72
>02_02_0168 + 7364410-7365153
Length = 247
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 693 STARGCRRASPHPPXASCTTTPRSAAARSCTPTTGPATSCTGA 821
+ AR P PP +S T SAAA TP G + A
Sbjct: 122 AAARAAAMEPPQPPPSSLTVQADSAAAAFLTPKNGGVSGAGAA 164
>01_04_0068 +
15693131-15693533,15693604-15693803,15693879-15694162,
15694251-15694428
Length = 354
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 6/40 (15%)
Frame = +3
Query: 714 RASPHPPXA----SCTTTPRSAAARSCTPTTGPA--TSCT 815
+A HPP A SCT + S+A SCT ++G + +SCT
Sbjct: 57 QAVHHPPWATSGVSCTISSGSSATSSCTISSGSSATSSCT 96
>11_01_0066 - 536281-537196,537397-537452
Length = 323
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Frame = +3
Query: 690 PSTARGCRRASPHPPXASCTTT----PRSAAARSCTPTTGPATSCT 815
PS RASP PP T P A + TPTT P+T+ T
Sbjct: 241 PSPTPTTTRASPTPPPIPTATVRPPPPLPRATVTPTPTTPPSTATT 286
>08_01_1010 - 10215625-10216335,10216372-10216473
Length = 270
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +3
Query: 690 PSTARGCRRASPHPPXASCTTTPRSAAARSCTPTTGP 800
PST RRA+ S T PR AA+ TP+T P
Sbjct: 89 PSTPTTPRRAASPDYTPSTPTPPRRAASPDYTPSTPP 125
>06_03_0853 - 25384198-25384731,25384810-25385210,25385816-25386011
Length = 376
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 332 EELSKLYRALEEERGVAEPERFVFPALYGARSRRLEEALVL 454
EE K AL+EER E E+F F ++ ++EE +L
Sbjct: 328 EERCKRAFALQEERNKLEREKFEFQKKEAEKAEKVEEERIL 368
>01_06_0482 - 29672720-29673854,29673941-29676267
Length = 1153
Score = 28.3 bits (60), Expect = 8.6
Identities = 35/121 (28%), Positives = 51/121 (42%), Gaps = 3/121 (2%)
Frame = +2
Query: 266 KMSENVRAHAINSV-YDTELLVYEELSKLYRALEEERGVAEPERFVFPALYGARSRRLEE 442
K V+A ++ +V D E + EL L L V EPE+F P + G RSRRL
Sbjct: 441 KKDSMVKAVSLPTVELDGEDQLDAELEDL-GCLINSLSVVEPEQFDSPIVEGKRSRRLSC 499
Query: 443 ALVLEDLRASGFGPRDRLRPVDWEY-ACAAMEQLARLHA-LGFALQLQAPEQYERLARRV 616
V E ++ R R ++ A + L H+ LG + ERL ++
Sbjct: 500 VGVTEGCNSASRMIRSRSMDASSDFVASEFLNMLGIEHSPLGATSGSDSESPRERLWKQF 559
Query: 617 E 619
E
Sbjct: 560 E 560
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,602,196
Number of Sequences: 37544
Number of extensions: 331922
Number of successful extensions: 1831
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1823
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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