Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_H10
         (882 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.          28   0.43 
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    27   0.57 
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          25   2.3  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   3.1  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    25   3.1  
DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       25   4.0  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    24   5.3  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   9.3  

>AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.
          Length = 412

 Score = 27.9 bits (59), Expect = 0.43
 Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = +2

Query: 578 QAPEQ-YERLARRVEMRFDLE-STGAWSSTVELALAATRPEHRARLQTGLAS 727
           QA  Q Y+ L R+ E R   + + G +    ELA  A +P+H  +LQT LA+
Sbjct: 260 QANRQLYDDLVRQSETRLKEQVANGNFKQAAELA--ARQPQHFRQLQTSLAT 309


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 27.5 bits (58), Expect = 0.57
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +2

Query: 455 EDLRASGFGPRDRLRPVDWEYACAAMEQLA-RLHALGFALQLQAP 586
           E L   GFGP  ++R   WE A   ME+ A +L  +   L L+ P
Sbjct: 348 EQLEPHGFGPAYQIRKQQWEGARVPMERDANKLQFIVNELFLERP 392


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 299  NSVYDTELLVYEELSKLYRALEEERGVAEPER 394
            +SV D+  L+  E + + R LEE    AEP+R
Sbjct: 999  SSVLDSMDLINGERASIARLLEEHEPEAEPQR 1030


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
 Frame = +3

Query: 690 PSTARGCRRASPHPPXASCTTTPRSAAARSCT-PTTGPATSCTGAT 824
           PS    C    P P     T   +SAA+ SC+  T    T+  GA+
Sbjct: 102 PSCRLPCPNLIPRPAEVPTTPEHKSAASSSCSLSTLETQTATAGAS 147


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
 Frame = +3

Query: 690 PSTARGCRRASPHPPXA--SCTTTPRSAAARSCTPTTGPATSCT 815
           P + R  RR SP       SC + P    +RS  PT+ P +  T
Sbjct: 251 PPSRRNPRRRSPRSGGRWPSCRSPPARRRSRSTRPTSWPRSRPT 294


>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 95  RSSGVRHVGLAVQADSKILRIPYS 24
           RS G   VG   Q D+K L +PY+
Sbjct: 332 RSQGTFGVGKDEQLDAKFLELPYN 355


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = -3

Query: 607 RQPLVLLRCLQLQREAERVQPRQLLHRGARVLPVHGAQAVAGAEPRRAQ 461
           +QP    +  Q Q++ +R Q +Q  H+G R +P    Q     + R+ Q
Sbjct: 258 QQPQQQQQPQQKQQQLQRRQQQQQQHQGQRYVPPQLRQQAHQQQQRQQQ 306


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -1

Query: 750 WCRKRXAGEARPVCSRARCSGRVAASASSTVL 655
           WC++  A   RP+  R  C  R + S S  VL
Sbjct: 806 WCQRMLASFQRPLAQRVVCGFR-SISYSVAVL 836


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 567,488
Number of Sequences: 2352
Number of extensions: 9866
Number of successful extensions: 36
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94680279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)