Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_H10
         (882 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50756-4|CAA90639.1|  482|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z50741-5|CAA90612.1|  482|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z81592-4|CAB04728.1|  436|Caenorhabditis elegans Hypothetical pr...    29   4.4  
U97012-9|AAK39142.2|  995|Caenorhabditis elegans Hypothetical pr...    29   4.4  
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z81592-5|CAB04727.1|  434|Caenorhabditis elegans Hypothetical pr...    29   5.8  
U97010-1|AAB52322.1|  334|Caenorhabditis elegans Hypothetical pr...    29   5.8  
Z70267-7|CAA94215.1|  303|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z68003-7|CAA91980.1|  303|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>Z50756-4|CAA90639.1|  482|Caenorhabditis elegans Hypothetical
           protein T08D10.1 protein.
          Length = 482

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +2

Query: 584 PEQYERLARRVEMRFDLESTGAWSSTVELALAATRPEHRARLQTGL 721
           P+Q+ R+ RR EMR  LE++G      +  L  +R  H  + + GL
Sbjct: 309 PKQFNRIMRRREMRQQLEASGRLPLARQKYLHESRHLHALKRKRGL 354


>Z50741-5|CAA90612.1|  482|Caenorhabditis elegans Hypothetical
           protein T08D10.1 protein.
          Length = 482

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +2

Query: 584 PEQYERLARRVEMRFDLESTGAWSSTVELALAATRPEHRARLQTGL 721
           P+Q+ R+ RR EMR  LE++G      +  L  +R  H  + + GL
Sbjct: 309 PKQFNRIMRRREMRQQLEASGRLPLARQKYLHESRHLHALKRKRGL 354


>Z81592-4|CAB04728.1|  436|Caenorhabditis elegans Hypothetical
           protein T16G1.4 protein.
          Length = 436

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +2

Query: 743 LHHYTALRRSTLVHADYRTCNLMHRRHXGGALXVXXVDYR 862
           L+ Y  + R  LVH D  + N++   + G  L    +DY+
Sbjct: 263 LNSYIGIERDVLVHGDLWSANILWEENEGKFLVSKVIDYQ 302


>U97012-9|AAK39142.2|  995|Caenorhabditis elegans Hypothetical
           protein C04E6.11 protein.
          Length = 995

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -3

Query: 619 LHAPRQPLVLLR-CLQLQREAERVQPRQLLHRGARVL 512
           LH P   + LLR CLQ   +  R+  + +LHRG+  L
Sbjct: 792 LHCPNGTVALLRHCLQQNTDEARMNLQFVLHRGSTFL 828


>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical
           protein F40H6.5 protein.
          Length = 1288

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +3

Query: 717 ASPHPPXASCTTTPRSAAARSCTPTTGPATSCTGAT 824
           +SP+ P  S TTTP SA+++  + TT  + S   A+
Sbjct: 533 SSPNNPFISITTTPDSASSQKISTTTAISHSAYSAS 568


>Z81592-5|CAB04727.1|  434|Caenorhabditis elegans Hypothetical
           protein T16G1.5 protein.
          Length = 434

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 9/40 (22%), Positives = 22/40 (55%)
 Frame = +2

Query: 743 LHHYTALRRSTLVHADYRTCNLMHRRHXGGALXVXXVDYR 862
           ++ Y  ++++ LVH D    N++ + + G  +    +DY+
Sbjct: 264 VNKYAGIQKNVLVHGDLWAANILWKENDGNCVASKVIDYQ 303


>U97010-1|AAB52322.1|  334|Caenorhabditis elegans Hypothetical
           protein W08A12.4 protein.
          Length = 334

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -3

Query: 466 AQVLQHQCFLEPPRPRAVQRGEH 398
           +Q+L+H+C +  PRP  ++  +H
Sbjct: 220 SQILEHRCLVSSPRPTDIEEWKH 242


>Z70267-7|CAA94215.1|  303|Caenorhabditis elegans Hypothetical
           protein E02H4.6 protein.
          Length = 303

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/59 (23%), Positives = 27/59 (45%)
 Frame = +2

Query: 683 TRPEHRARLQTGLASPAXRFLHHYTALRRSTLVHADYRTCNLMHRRHXGGALXVXXVDY 859
           TR + R      +   A R ++   A+ +  ++H D +T N+M R      + +  +DY
Sbjct: 105 TRCDDRRISDLNIIKIAVRLVNVLEAIHQKGVIHRDLKTTNVMIRSRGQSEVNLVLIDY 163


>Z68003-7|CAA91980.1|  303|Caenorhabditis elegans Hypothetical
           protein E02H4.6 protein.
          Length = 303

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/59 (23%), Positives = 27/59 (45%)
 Frame = +2

Query: 683 TRPEHRARLQTGLASPAXRFLHHYTALRRSTLVHADYRTCNLMHRRHXGGALXVXXVDY 859
           TR + R      +   A R ++   A+ +  ++H D +T N+M R      + +  +DY
Sbjct: 105 TRCDDRRISDLNIIKIAVRLVNVLEAIHQKGVIHRDLKTTNVMIRSRGQSEVNLVLIDY 163


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,195,581
Number of Sequences: 27780
Number of extensions: 217021
Number of successful extensions: 994
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 977
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)