Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_H07
         (1079 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            29   0.24 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   1.7  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    24   9.0  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 29.1 bits (62), Expect = 0.24
 Identities = 13/33 (39%), Positives = 13/33 (39%)
 Frame = +1

Query: 658 PXXXPPPPSXXXPPAGXLXSIXCXPPXGXXPPL 756
           P   PPPP    PP   L       P G  PPL
Sbjct: 581 PPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPL 613


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.2 bits (55), Expect = 1.7
 Identities = 14/38 (36%), Positives = 14/38 (36%)
 Frame = -2

Query: 571 GXRGXXGGSPXXPXXGGGGXXXGXAXXXXPRXRRXXPG 458
           G  G  GGS   P  GGGG   G       R R    G
Sbjct: 210 GAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGG 247


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 9.0
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -2

Query: 565  RGXXGGSPXXPXXGGGGXXXG 503
            +G  GGSP     GGGG   G
Sbjct: 1483 QGGYGGSPTKGAGGGGGGGGG 1503


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 537,246
Number of Sequences: 2352
Number of extensions: 7467
Number of successful extensions: 25
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 120863106
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)