Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_H06
         (892 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY515709-1|AAR99659.1|  721|Drosophila melanogaster bestrophin 1...    31   2.8  
AY061546-1|AAL29094.1|  721|Drosophila melanogaster LP05915p pro...    31   2.8  
AF218817-1|AAF32327.1|  721|Drosophila melanogaster Dbest protein.     31   2.8  
AE014297-1109|AAF54503.1|  721|Drosophila melanogaster CG6264-PA...    31   2.8  
AY095176-1|AAM12269.1|  942|Drosophila melanogaster GH12763p pro...    30   3.7  
AE014134-3279|AAF53921.2|  942|Drosophila melanogaster CG9323-PA...    30   3.7  

>AY515709-1|AAR99659.1|  721|Drosophila melanogaster bestrophin 1
           protein.
          Length = 721

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = +1

Query: 46  FAILNGQKRLPSEPNLKNVSQNKSITNNIPR--KKLIIRSNSSSRKKLPKGNNLERFGAS 219
           F+  NG+ RL S P+L +VS   S  N +    K+ + R +S      P  +   +F AS
Sbjct: 403 FSAGNGKMRLDSSPSLVSVSGTLSRVNTVASALKRFLSRDDSRPGSATPSQDQPYKFPAS 462

Query: 220 A 222
           A
Sbjct: 463 A 463


>AY061546-1|AAL29094.1|  721|Drosophila melanogaster LP05915p
           protein.
          Length = 721

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = +1

Query: 46  FAILNGQKRLPSEPNLKNVSQNKSITNNIPR--KKLIIRSNSSSRKKLPKGNNLERFGAS 219
           F+  NG+ RL S P+L +VS   S  N +    K+ + R +S      P  +   +F AS
Sbjct: 403 FSAGNGKMRLDSSPSLVSVSGTLSRVNTVASALKRFLSRDDSRPGSATPSQDQPYKFPAS 462

Query: 220 A 222
           A
Sbjct: 463 A 463


>AF218817-1|AAF32327.1|  721|Drosophila melanogaster Dbest protein.
          Length = 721

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = +1

Query: 46  FAILNGQKRLPSEPNLKNVSQNKSITNNIPR--KKLIIRSNSSSRKKLPKGNNLERFGAS 219
           F+  NG+ RL S P+L +VS   S  N +    K+ + R +S      P  +   +F AS
Sbjct: 403 FSAGNGKMRLDSSPSLVSVSGTLSRVNTVASALKRFLSRDDSRPGSATPSQDQPYKFPAS 462

Query: 220 A 222
           A
Sbjct: 463 A 463


>AE014297-1109|AAF54503.1|  721|Drosophila melanogaster CG6264-PA
           protein.
          Length = 721

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = +1

Query: 46  FAILNGQKRLPSEPNLKNVSQNKSITNNIPR--KKLIIRSNSSSRKKLPKGNNLERFGAS 219
           F+  NG+ RL S P+L +VS   S  N +    K+ + R +S      P  +   +F AS
Sbjct: 403 FSAGNGKMRLDSSPSLVSVSGTLSRVNTVASALKRFLSRDDSRPGSATPSQDQPYKFPAS 462

Query: 220 A 222
           A
Sbjct: 463 A 463


>AY095176-1|AAM12269.1|  942|Drosophila melanogaster GH12763p
           protein.
          Length = 942

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +2

Query: 587 MCIAHLIYSRCNRSHINVKRHVRANLRLILIER 685
           +C+A   Y +CNR   +V   +R+NL  +L+++
Sbjct: 867 LCVAKTYYFKCNRETADVVIQLRSNLEKLLLKK 899


>AE014134-3279|AAF53921.2|  942|Drosophila melanogaster CG9323-PA
           protein.
          Length = 942

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +2

Query: 587 MCIAHLIYSRCNRSHINVKRHVRANLRLILIER 685
           +C+A   Y +CNR   +V   +R+NL  +L+++
Sbjct: 867 LCVAKTYYFKCNRETADVVIQLRSNLEKLLLKK 899


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,009,438
Number of Sequences: 53049
Number of extensions: 724379
Number of successful extensions: 2106
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2106
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)