Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_H01
(874 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0701 - 10523053-10523220,10523802-10523916,10524102-105241... 39 0.005
04_04_1321 + 32634471-32634566,32635102-32635193,32635290-326355... 36 0.056
09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,353... 33 0.30
01_05_0451 - 22361617-22361811,22362728-22362842,22363443-223635... 32 0.69
05_03_0074 + 8095355-8096575,8096664-8096901,8096990-8097667,809... 31 0.91
12_02_0628 + 21357876-21359921 31 1.2
01_06_0216 + 27618116-27618548,27618960-27619042,27619169-276192... 31 1.2
03_02_0426 + 8365419-8365587,8365697-8365890 31 1.6
10_03_0006 + 6929237-6929304,6929581-6929603,6929609-6929710,692... 30 2.1
04_04_1250 + 32077590-32078000,32078132-32078308,32078437-320785... 30 2.1
03_02_0981 + 12917195-12917572,12917661-12917818,12918732-129187... 30 2.1
05_01_0431 + 3412178-3412336,3413012-3413109,3413185-3413312,341... 30 2.8
04_03_0183 + 12352147-12352179,12352390-12353349,12353815-123539... 29 3.7
05_04_0263 + 19534563-19535522 29 4.9
11_08_0011 + 27612206-27615110,27615211-27615538,27615989-276160... 29 6.4
08_02_1081 + 24215323-24215335,24215450-24215572,24216241-242164... 29 6.4
09_06_0241 + 21803476-21803604,21804968-21805026,21805117-21805444 28 8.5
08_01_1011 + 10226160-10226676,10226794-10226810,10227677-102278... 28 8.5
08_01_0626 - 5445676-5446687,5447099-5447430 28 8.5
>03_02_0701 -
10523053-10523220,10523802-10523916,10524102-10524172,
10524263-10524420,10524497-10524590,10524678-10524766,
10525322-10525419,10525492-10525625,10525714-10525797,
10525903-10526151
Length = 419
Score = 39.1 bits (87), Expect = 0.005
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +1
Query: 286 CPLCGLHRLLVIQCYAPLENSV--YHRTLYVFACINPNCWI--QSESW 417
C CG V+Q YAP+E++ +HRTL++F C + C + Q + W
Sbjct: 99 CGFCGEPLQFVLQIYAPIEDNAASFHRTLFMFMCPSMACLLRDQHDQW 146
>04_04_1321 +
32634471-32634566,32635102-32635193,32635290-32635585,
32635665-32635863,32636019-32636223,32637001-32637093
Length = 326
Score = 35.5 bits (78), Expect = 0.056
Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 1/118 (0%)
Frame = +1
Query: 319 IQCYAPLEN-SVYHRTLYVFACINPNCWIQSESWLCLRMQYEDKKTKEASAIVAIPNLET 495
+ +AP+ ++ +RT+YV C P C +SW LR+Q + + +
Sbjct: 31 VPVHAPVAKFNIENRTIYVLVCPKPKCGTNPQSWKVLRVQKCHTSAQTDGKVDETDQING 90
Query: 496 NLSWCSGADEWDENDNDDSANGNLMSVDNDPSPNNVVQRISDEDEESIPMNSKLSNKP 669
N+ CS E + N + D+D + + + E+ ++ NSK NKP
Sbjct: 91 NV--CS-----SEPSSSSLLNKSHEVSDDDFDLDALANAL--EEAATLASNSKKQNKP 139
>09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,
3536083-3536226,3536974-3537375,3537499-3537721,
3537830-3542368,3542480-3542599,3543005-3543038,
3543922-3544102,3544198-3544815,3545022-3551098,
3551139-3551304,3551508-3551614,3552056-3552178,
3553417-3553642
Length = 5100
Score = 33.1 bits (72), Expect = 0.30
Identities = 15/56 (26%), Positives = 32/56 (57%)
Frame = +1
Query: 445 KKTKEASAIVAIPNLETNLSWCSGADEWDENDNDDSANGNLMSVDNDPSPNNVVQR 612
K+ K + ++V N E+N + A +E+++D +++G L+S+D D + +R
Sbjct: 1533 KQLKNSDSLVLRTNQESNSTVDCDASSGEEDEDDGTSDGELVSIDRDEEEDGNSER 1588
>01_05_0451 -
22361617-22361811,22362728-22362842,22363443-22363513,
22363600-22363754,22363843-22363933,22364049-22364104,
22364910-22365027,22365087-22365200,22365289-22365504
Length = 376
Score = 31.9 bits (69), Expect = 0.69
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Frame = +1
Query: 319 IQCYAPLE--NSVYHRTLYVFACINPNC 396
+Q YAP++ + YHRTL+VF C + C
Sbjct: 109 LQVYAPIQCKETAYHRTLFVFMCPSMAC 136
>05_03_0074 +
8095355-8096575,8096664-8096901,8096990-8097667,
8097787-8097974
Length = 774
Score = 31.5 bits (68), Expect = 0.91
Identities = 19/85 (22%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +1
Query: 388 PNCWIQSESWLCLRM-QYEDKKTKEASAIVAIPNLETNLSWCSGADEWDENDNDDSANGN 564
P+C I+S+ + + Q E++ AS+ +P N G + DE+ +D+ +G
Sbjct: 41 PSC-IESQMQVVIYQGQLENESDSGASSPTTVPPDVENYDIGGGPN--DESSSDEDNDGG 97
Query: 565 LMSVDNDPSPNNVVQRISDEDEESI 639
+ +++DP + + D++S+
Sbjct: 98 VYDIEHDPGLRTPISQYDVNDQDSV 122
>12_02_0628 + 21357876-21359921
Length = 681
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 505 WCSGADEWDENDNDDSANGNLMSVDNDPSPNNVVQRISDEDE-ESIPMNSKLSNK 666
W G D+ D++D+D+ G D+D +P+ DED+ E + S+L +
Sbjct: 112 WKEGDDDDDDDDDDELDEGRRSGDDSDSAPSVGSDLYKDEDDKEQLEKMSELDRE 166
>01_06_0216 +
27618116-27618548,27618960-27619042,27619169-27619225,
27619255-27619407,27619777-27619872,27620103-27620183,
27620184-27620254,27620343-27620385,27620502-27620582,
27620684-27620743,27621018-27621083,27621358-27621455,
27621794-27621842,27621933-27621977,27622845-27623369
Length = 646
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 538 DNDDSANGNLMSVDNDPSPNNVVQRISDEDEESIPMNSKLSNKPLGTSK 684
D+D+ A N +D++P P N R S ED P + S+KP S+
Sbjct: 538 DSDNDAVYNWHVIDDEPLPRNT--RSSSEDTRPSPTQKRKSSKPKQRSR 584
>03_02_0426 + 8365419-8365587,8365697-8365890
Length = 120
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 496 NLSWCSGADEWDENDNDDSANGNLMSVDNDPSPNNVV 606
N+ W GAD W + N + G+++ DPS +NVV
Sbjct: 34 NVDWSFGADSWSKGKNFRA--GDVLVFSYDPSVHNVV 68
>10_03_0006 +
6929237-6929304,6929581-6929603,6929609-6929710,
6929752-6930207,6930237-6930538,6930628-6930717,
6931379-6931471
Length = 377
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 502 SWCSGADEWDENDNDDSAN-GNLMSVDNDPSPNNVVQRISDEDEESIPMNSKLSN 663
SW + DE ++ DD N S+ +D P ++ I D+D+ + + S SN
Sbjct: 222 SWATSEDEPEDASEDDGVNESEDESMASDGMPEHIPSTIYDKDDTPMILGSIYSN 276
>04_04_1250 +
32077590-32078000,32078132-32078308,32078437-32078561,
32078629-32078761,32078866-32079015,32079105-32079158,
32079437-32079532,32080021-32080095,32080723-32080824,
32080903-32081589,32081686-32081817,32081916-32082023,
32082170-32082319
Length = 799
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +1
Query: 520 DEWDENDNDDSANGNLMSVDNDPSPNNVVQRISDEDEESIPMNSKLSNKPLGTSK 684
++ D +DND N + + +D+D N V SD+DEE ++ KL + G+ +
Sbjct: 549 EDQDISDNDSEENDDELELDSDMDEENDVSE-SDDDEE---LSEKLDDSDEGSDQ 599
>03_02_0981 +
12917195-12917572,12917661-12917818,12918732-12918765,
12918942-12919074,12919167-12919221,12919281-12920064,
12920440-12920769,12920788-12920895,12921259-12921678,
12921775-12921847,12922291-12922376,12922873-12922992,
12923086-12923156,12923350-12923449
Length = 949
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -3
Query: 755 CDRSRYCTNCXLNW-GHICIMSIKHLEVPK-GLFDSFEFIGMLSSSSSEIL 609
CDR YCTNC W I I ++ V + D E++ + +S +L
Sbjct: 166 CDRRGYCTNCISRWYSDIPIDDVRKARVQEISAVDKLEYLHSILASVLPVL 216
>05_01_0431 +
3412178-3412336,3413012-3413109,3413185-3413312,
3413770-3413881,3414309-3414489,3414714-3414896,
3415133-3415315,3416062-3416131,3416413-3416522,
3416604-3416908,3417079-3417175,3417622-3417765,
3418217-3418303,3418387-3418473,3418566-3418706,
3418805-3418930,3419166-3419264,3419690-3419757,
3420275-3420341,3420713-3420883,3420959-3421048,
3421831-3421911,3423397-3423470,3423784-3423855,
3423925-3424017,3424138-3424204
Length = 1030
Score = 29.9 bits (64), Expect = 2.8
Identities = 26/119 (21%), Positives = 49/119 (41%), Gaps = 6/119 (5%)
Frame = +1
Query: 223 STKLVVSLIGHRLENFQYSFKCPLCGLHRLLVIQCYAPLENSVYHRTLYV----FACINP 390
S L + + HRL +F+ F + + I C+ P V + +AC+
Sbjct: 270 SQLLSIPFLWHRLSHFKKVFSANGLSKYYIHQIACFLPSCADVLPNDISSNHPGYACVLA 329
Query: 391 NCWIQSESWLCLRMQYEDKKTKEASAIVA--IPNLETNLSWCSGADEWDENDNDDSANG 561
N +++ +W+ ++ + + A+ + L T S AD+ D+ DD NG
Sbjct: 330 NV-LEAATWILSEPKFASETAADIIAVCTSLLDALPTITSPTGRADDDDDTPMDDVING 387
>04_03_0183 +
12352147-12352179,12352390-12353349,12353815-12353998,
12354087-12354799
Length = 629
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/85 (22%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +1
Query: 388 PNCWIQSESWLCLRM-QYEDKKTKEASAIVAIPNLETNLSWCSGADEWDENDNDDSANGN 564
P+C I+S+ + + Q E++ AS+ +P L+ G DE+ +D+ +G
Sbjct: 71 PSC-IESQIQVVIYQGQPENESDSGASSPTTVP-LDVENDDIGGGPN-DESSSDEDNDGG 127
Query: 565 LMSVDNDPSPNNVVQRISDEDEESI 639
+ +++DP + + D++S+
Sbjct: 128 VYDIEHDPGLRTPISQYDVNDQDSV 152
>05_04_0263 + 19534563-19535522
Length = 319
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +1
Query: 469 IVAIPNLETNLSW---CSGADEWDENDNDDSANGNLMSVDNDPSPNNVVQRISDEDEE 633
+VA +L+W CS A ++DE D+ M VDN N + +R+ DE E+
Sbjct: 245 MVAKKGFTCSLAWLLNCSDA-KFDERMKYDTIGIEEMEVDNSFDTNTLSERVEDEVED 301
>11_08_0011 +
27612206-27615110,27615211-27615538,27615989-27616059,
27616962-27617118,27617676-27617709
Length = 1164
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -2
Query: 681 GGSQGLVRQFRVHRNALFIFIRNSLHNIIGARVI 580
G G +++FR HRN L + S N+ G RVI
Sbjct: 464 GNLSGTLQEFRSHRNKLTGQLPPSFSNLTGLRVI 497
>08_02_1081 +
24215323-24215335,24215450-24215572,24216241-24216489,
24218517-24218720,24218864-24218993,24219610-24219679,
24219766-24219900,24219996-24220209,24220314-24220455,
24220630-24220851,24220997-24221195
Length = 566
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +1
Query: 511 SGADEWDENDNDDSANGNLMSVDNDPSPNNVVQRISDEDEESIPMNSKLSNKPLGTSK 684
SGA D+ + D + + SVD PSPNNV +++ + + S N + K
Sbjct: 351 SGAQ--DQAETDPMSRVSYRSVDT-PSPNNVADKVTSQPHAQLVRPSPAENHTVNCDK 405
>09_06_0241 + 21803476-21803604,21804968-21805026,21805117-21805444
Length = 171
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +1
Query: 490 ETNLSWCSGADEWDENDNDDSANGNLMSVDNDPSPNNVVQRISDEDEE 633
E + S G ++ D++D+D ANG+ S D D ++ ++D++
Sbjct: 103 EEDFSGDEGGEDEDDDDDDPEANGDGGSDDEDDDDDDGGDEDGEDDDD 150
>08_01_1011 +
10226160-10226676,10226794-10226810,10227677-10227886,
10227921-10228406
Length = 409
Score = 28.3 bits (60), Expect = 8.5
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Frame = +1
Query: 484 NLETNLSWCSGADEWDENDNDDSANGNLMSVDNDP--SPNNVVQ-RISDEDE-ESIPMNS 651
NL+T+L + + EWDE++ D+ + +D DP S + + + +S EDE +NS
Sbjct: 241 NLKTSLGQIAYS-EWDEDEIDEDPLNSEDEIDEDPLNSEDEIDEDSLSSEDEIYEYFLNS 299
Query: 652 KLSNKPLGTSKCLML 696
++S+ + K + L
Sbjct: 300 EISSYLFASLKYVSL 314
>08_01_0626 - 5445676-5446687,5447099-5447430
Length = 447
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 520 DEWDENDNDDSANGNLMSVDNDPSPNNVVQRISDED 627
DE + ND+DD D D N+VV+ DED
Sbjct: 237 DEDENNDDDDEEEEMEEDEDLDEDKNDVVEEEEDED 272
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,934,117
Number of Sequences: 37544
Number of extensions: 352367
Number of successful extensions: 1061
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1054
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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