Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_H01
         (874 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    30   0.11 
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   4.0  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    24   5.3  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   5.3  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    23   9.2  

>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 29.9 bits (64), Expect = 0.11
 Identities = 19/71 (26%), Positives = 31/71 (43%)
 Frame = +1

Query: 346  SVYHRTLYVFACINPNCWIQSESWLCLRMQYEDKKTKEASAIVAIPNLETNLSWCSGADE 525
            +V ++T  V A + P C +  E   C + Q E      A  + A   + T  SW    +E
Sbjct: 845  TVRYQTAVVLASMIPICLLVQEDARCYQRQQEAGGALSAGILRAEERINTMQSW---QEE 901

Query: 526  WDENDNDDSAN 558
            WD + +   A+
Sbjct: 902  WDADASQADAS 912


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +1

Query: 202 NLXSITVSTKLVVSLIGHRLENFQYSFKCPLC 297
           NL    +  K+V  +  H   +F   F+CPLC
Sbjct: 498 NLHRCKLCGKVVTHIRNHYHVHFPGRFECPLC 529


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 244 LIGHRLENFQYSFKCPLCG 300
           L GH+  + Q   KC LCG
Sbjct: 536 LTGHKARSCQNEAKCALCG 554


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
 Frame = +1

Query: 382  INPNCWIQSESWLCLRMQYEDKKTKEA-SAIVAIPNLETNLSWC-SGADEWDENDNDDSA 555
            ++   W Q E +    +Q+  K+ K+           +  +  C +G    + N+NDDS 
Sbjct: 1982 VSSTLWRQREEYCARLIQHAWKRYKQRHGGGTDASGDDLEIDACDNGCGGGNGNENDDSG 2041

Query: 556  NGNLMSVDN 582
            +G   S DN
Sbjct: 2042 DGATGSGDN 2050


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 553 LSHHYHFHPTRLHHY 509
           L+H +H HP   HH+
Sbjct: 494 LTHSHHAHPHHHHHH 508


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 748,530
Number of Sequences: 2352
Number of extensions: 14701
Number of successful extensions: 30
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93439926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)