Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_G23
(892 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 36 0.043
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 33 0.23
01_06_1670 - 39007402-39008229,39008320-39008567,39009159-390093... 32 0.70
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 31 0.93
09_04_0506 - 18188785-18190599 26 1.5
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 30 2.8
08_01_0059 - 394001-394708 30 2.8
02_03_0367 + 18220099-18220905 30 2.8
11_02_0065 - 7938007-7938393,7939292-7939435,7940597-7940665,794... 29 5.0
07_03_1136 + 24218601-24218734,24218769-24219906 29 5.0
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 5.0
03_05_0067 - 20460206-20460703,20461255-20461530 29 5.0
09_06_0107 + 20907560-20908491,20908511-20908625,20908967-209090... 29 6.6
09_02_0495 + 9880714-9881196 29 6.6
08_02_0672 - 19904353-19904839,19905646-19905704,19906137-199063... 28 8.7
07_01_0479 + 3606663-3607448 28 8.7
03_02_0631 + 9969841-9969868,9969965-9970082,9970186-9970828,997... 28 8.7
03_01_0515 - 3864796-3865425 28 8.7
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 35.9 bits (79), Expect = 0.043
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = +1
Query: 601 PPPXXKKXXXXXXPPPXPLKKKXXXXPPPXXLFXXGPPXGXXXXGXPXXPPP 756
PPP PPP P K PPP GPP G P PPP
Sbjct: 313 PPPPPPPKPAAAAPPPPPPPKAAPPPPPP-----KGPPPPPPAKGPPPPPPP 359
Score = 34.3 bits (75), Expect = 0.13
Identities = 22/64 (34%), Positives = 22/64 (34%), Gaps = 4/64 (6%)
Frame = +1
Query: 601 PPPXXKKXXXXXXPPPXPLKKKXXXXPP---PXXLFXXGPPXGXXXXG-XPXXPPPXXXX 768
PPP K PPP P K PP P GPP G P PPP
Sbjct: 314 PPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGK 373
Query: 769 XGXP 780
G P
Sbjct: 374 KGGP 377
Score = 33.5 bits (73), Expect = 0.23
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = +1
Query: 601 PPPXXKKXXXXXXPPPXPLKKKXXXXPPPXXLFXXGPPXGXXXXGXPXXPPP 756
PPP K PPP P K PPP PP G P PPP
Sbjct: 336 PPPPPPKG-----PPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPP 382
Score = 31.9 bits (69), Expect = 0.70
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +3
Query: 642 PPPPPKKKXXXXSPPXXSFXXGAPXXXKXXGXXXPPP 752
PPPPP K +PP AP G PPP
Sbjct: 313 PPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPP 349
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +3
Query: 603 PPPXXKXFXXXXXPPPPPKKKXXXXSPPXXSFXXGAPXXXKXXGXXXPP 749
PPP K PPPPPK PP G P G PP
Sbjct: 346 PPPPAKG----PPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPP 390
Score = 29.1 bits (62), Expect = 5.0
Identities = 19/60 (31%), Positives = 19/60 (31%), Gaps = 2/60 (3%)
Frame = +1
Query: 601 PPPXXKKXXXXXXP--PPXPLKKKXXXXPPPXXLFXXGPPXGXXXXGXPXXPPPXXXXXG 774
PPP K P PP P K PPP PP G PPP G
Sbjct: 328 PPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPK--GPSPPPPPPPGGKKGGPPPPPPKGG 385
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 33.5 bits (73), Expect = 0.23
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +1
Query: 604 PPXXKKXXXXXXPPPXPLKKKXXXXPPPXXLFXXGPPXGXXXXGXPXXPPP 756
PP PPP PL PPP GPP P PPP
Sbjct: 1158 PPLPPSPPPATPPPPPPLSPSLPPPPPPPP-LPSGPPPQPAPPPLPIQPPP 1207
>01_06_1670 -
39007402-39008229,39008320-39008567,39009159-39009364,
39009454-39011054
Length = 960
Score = 31.9 bits (69), Expect = 0.70
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 606 PPXXKXFXXXXXPPPPPKKKXXXXSPP 686
PP F PPPPP++K SPP
Sbjct: 357 PPPPPPFAPTLPPPPPPRRKPPSPSPP 383
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 31.5 bits (68), Expect = 0.93
Identities = 16/56 (28%), Positives = 17/56 (30%)
Frame = +3
Query: 606 PPXXKXFXXXXXPPPPPKKKXXXXSPPXXSFXXGAPXXXKXXGXXXPPPPXXXXXG 773
PP + PPP PP F G P G PPPP G
Sbjct: 1139 PPLPEGIGGVPPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGG 1194
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/60 (33%), Positives = 21/60 (35%)
Frame = +1
Query: 601 PPPXXKKXXXXXXPPPXPLKKKXXXXPPPXXLFXXGPPXGXXXXGXPXXPPPXXXXXGXP 780
PPP PP PL + PPP PP G G P PPP G P
Sbjct: 1123 PPPPIGGLGGHQAPPAPPLPEGIGGVPPP-------PPVG-GLGGPPAPPPPAGFRGGTP 1174
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
Frame = +3
Query: 642 PPPPPKKKXXXXSPPXXSFXXGAPXXXKXXG--XXXPPPPXXXXXG 773
PP PP +PP S GAP G PPPP G
Sbjct: 1086 PPLPPTLGDYGVAPPPPSIGAGAPPPPPPPGGITGVPPPPPIGGLG 1131
Score = 28.7 bits (61), Expect = 6.6
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = +3
Query: 603 PPPXXKXFXXXXXPPPPPKKKXXXXSPPXXSFXXGAPXXXKXXGXXXPPPPXXXXXG 773
PPP PPPPP+ PP GAP G PPP G
Sbjct: 1174 PPP--NAHGGVAPPPPPPRGHGGVGGPPT---PPGAPAPPMPPGVPGGPPPPPGGRG 1225
>09_04_0506 - 18188785-18190599
Length = 604
Score = 25.8 bits (54), Expect(2) = 1.5
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = +3
Query: 642 PPPPPKKKXXXXSPPXXSFXXGAPXXXKXXGXXXPPPP 755
PPPPP+++ P + AP + PP P
Sbjct: 97 PPPPPQRQPEKVHIPGVAAVPPAPVPDRPNPVHLPPQP 134
Score = 23.4 bits (48), Expect(2) = 1.5
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 603 PPPXXKXFXXXXXPPPPPKKK 665
PPP + PPPPP+++
Sbjct: 64 PPPISQQPPPLQAPPPPPQQQ 84
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/60 (30%), Positives = 18/60 (30%), Gaps = 3/60 (5%)
Frame = +3
Query: 603 PPPXXKXFXXXXXPPPPP---KKKXXXXSPPXXSFXXGAPXXXKXXGXXXPPPPXXXXXG 773
PPP PPPPP K PP G P G P PP G
Sbjct: 752 PPPLMTGKKAPAPPPPPPQAPKPPGTVPPPPPLHGASGRPHPPSSKGLNAPAPPPLLGRG 811
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/38 (31%), Positives = 13/38 (34%)
Frame = +3
Query: 642 PPPPPKKKXXXXSPPXXSFXXGAPXXXKXXGXXXPPPP 755
PPPPP + S P P PPPP
Sbjct: 716 PPPPPANRSNGPSAPAPPLPPPLPAAANKRNPPAPPPP 753
Score = 28.7 bits (61), Expect = 6.6
Identities = 18/60 (30%), Positives = 19/60 (31%)
Frame = +1
Query: 601 PPPXXKKXXXXXXPPPXPLKKKXXXXPPPXXLFXXGPPXGXXXXGXPXXPPPXXXXXGXP 780
P K+ PPP KK PPP PP G PPP G P
Sbjct: 739 PAAANKRNPPAPPPPPLMTGKKAPAPPPP-------PPQAPKPPGTVPPPPPLHGASGRP 791
>08_01_0059 - 394001-394708
Length = 235
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/51 (31%), Positives = 19/51 (37%)
Frame = +3
Query: 603 PPPXXKXFXXXXXPPPPPKKKXXXXSPPXXSFXXGAPXXXKXXGXXXPPPP 755
PPP + PPPPP++ SPP P PPPP
Sbjct: 4 PPPPRRAPPPPATPPPPPRRAPPPPSPPI------RPPPPPTPRPYAPPPP 48
>02_03_0367 + 18220099-18220905
Length = 268
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +1
Query: 601 PPPXXKKXXXXXXPPPXPLKKKXXXXPPPXXLFXXGPP 714
P P K PP P +K PPP LF PP
Sbjct: 157 PSPMSPKVTPAQQQPPQPAEKVHDASPPPSSLFPPLPP 194
>11_02_0065 -
7938007-7938393,7939292-7939435,7940597-7940665,
7940762-7940809,7941488-7941584,7941688-7941767,
7941841-7941912,7942256-7942350,7943903-7943984,
7945176-7945209,7945255-7945262,7945657-7946058
Length = 505
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = +3
Query: 603 PPPXXKXFXXXXXPPPPPKKKXXXXSPPXXSFXXGAPXXXKXXGXXXPPP 752
PPP F PPPPP + F GAP + PPP
Sbjct: 67 PPPPPAAFFAAVPPPPPPPFEYYPAVGGGGGF--GAPVELEAEAEQQPPP 114
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 29.1 bits (62), Expect = 5.0
Identities = 22/71 (30%), Positives = 23/71 (32%), Gaps = 1/71 (1%)
Frame = -3
Query: 809 PPXXXXXXXXGXPXXXXXGGGXXG-XPXXFXPXGGPXXKRXXGGGXXXXFFFRGXGGGXX 633
PP G P GGG G P GGP R GGG G G G
Sbjct: 160 PPGGGRGGALGRPPGGGGGGGGPGRAPGGGGGGGGPG--RAPGGGGGGGGLGGGGGEGGA 217
Query: 632 XXKXFXXXGGG 600
+ GGG
Sbjct: 218 PERVIGGGGGG 228
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +3
Query: 642 PPPPPKKKXXXXSPPXXSFXXGAPXXXKXXGXXXPPPP 755
PPPPP PP P G PPPP
Sbjct: 350 PPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGGPPPP 387
>03_05_0067 - 20460206-20460703,20461255-20461530
Length = 257
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/51 (33%), Positives = 20/51 (39%)
Frame = +3
Query: 603 PPPXXKXFXXXXXPPPPPKKKXXXXSPPXXSFXXGAPXXXKXXGXXXPPPP 755
PPP + PPPPP+ PP + GA G PPPP
Sbjct: 4 PPPPPQW---AMGPPPPPQYFQAGPPPPPPQYFQGAHPPAAMWG--QPPPP 49
>09_06_0107 +
20907560-20908491,20908511-20908625,20908967-20909058,
20909293-20909556,20910714-20911494
Length = 727
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/51 (27%), Positives = 17/51 (33%)
Frame = +3
Query: 603 PPPXXKXFXXXXXPPPPPKKKXXXXSPPXXSFXXGAPXXXKXXGXXXPPPP 755
PPP PPPPP +P S+ + PPPP
Sbjct: 74 PPPQTPPSPPPPPPPPPPPPPPLSPTPTTTSWTTNSSSISASPILPPPPPP 124
>09_02_0495 + 9880714-9881196
Length = 160
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
Frame = -3
Query: 458 GGGXXXGGVF---FXDPTPXXXXGXFPPXXXGGFP 363
GG GG+F + P P G F P GGFP
Sbjct: 66 GGDGGAGGLFGGTYPPPPPGVMPGAFAPPFGGGFP 100
>08_02_0672 -
19904353-19904839,19905646-19905704,19906137-19906352,
19906845-19907422,19907506-19908180,19908263-19908653,
19909469-19909621,19909727-19909980,19911023-19911479
Length = 1089
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +3
Query: 645 PPPPKKKXXXXSPPXXSFXXGAPXXXKXXGXXXPPPP 755
PPPP +PP SF AP PPPP
Sbjct: 57 PPPPMSTPPVVAPPMHSF---APSFRPLGAPPPPPPP 90
>07_01_0479 + 3606663-3607448
Length = 261
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/50 (28%), Positives = 16/50 (32%)
Frame = +3
Query: 603 PPPXXKXFXXXXXPPPPPKKKXXXXSPPXXSFXXGAPXXXKXXGXXXPPP 752
PPP F P PP+ + P G P G PPP
Sbjct: 201 PPPPPGPFMRGPPPMGPPQVRPGMPGGPPPGMRPGMPPPPFRPGMPPPPP 250
>03_02_0631 +
9969841-9969868,9969965-9970082,9970186-9970828,
9971146-9971935,9972002-9972051,9972618-9972704
Length = 571
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +3
Query: 603 PPPXXKXFXXXXXPPPPPKKKXXXXSPP 686
PPP K PPPPP +K SPP
Sbjct: 91 PPPAQKP--SKVSPPPPPPQKSAKVSPP 116
>03_01_0515 - 3864796-3865425
Length = 209
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/59 (28%), Positives = 17/59 (28%)
Frame = +1
Query: 604 PPXXKKXXXXXXPPPXPLKKKXXXXPPPXXLFXXGPPXGXXXXGXPXXPPPXXXXXGXP 780
PP PPP P PPP L PP P PPP P
Sbjct: 61 PPPPAAGPLMPPPPPPP---SVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSPVKSSP 116
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.146 0.483
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,570,221
Number of Sequences: 37544
Number of extensions: 494432
Number of successful extensions: 1335
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 979
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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