Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_G22
         (1097 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   6.9  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    24   6.9  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   6.9  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 6.9
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +1

Query: 985  PPPXPPXGAXPHP 1023
            PPP PP G  P P
Sbjct: 585  PPPPPPMGPPPSP 597


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP protein.
          Length = 151

 Score = 24.2 bits (50), Expect = 6.9
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +3

Query: 984  PXPPPAXGXXPPP 1022
            P PPP  G  PPP
Sbjct: 108  PLPPPMMGMRPPP 120


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 24.2 bits (50), Expect = 6.9
 Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
 Frame = -3

Query: 405 GXRGXPGPXXRAXXXEAPPXPXXXG--GTPPYKNXAG 301
           G +G PGP   A    AP  P   G  G P  K   G
Sbjct: 158 GPKGEPGPKGPAGHPGAPGRPGVDGVKGLPGLKGDIG 194


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 689,905
Number of Sequences: 2352
Number of extensions: 12432
Number of successful extensions: 34
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 123329700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)