Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_G16
         (879 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051790-1|AAK93214.1|  320|Drosophila melanogaster LD30634p pro...    73   4e-13
AE014297-894|AAF54350.1|  320|Drosophila melanogaster CG8444-PA ...    73   4e-13
AE014134-2571|AAF53442.4| 1443|Drosophila melanogaster CG4168-PA...    31   2.1  
X68701-1|CAA48652.1|  682|Drosophila melanogaster connectin prot...    30   4.8  
M96647-1|AAA28424.1|  682|Drosophila melanogaster connectin prot...    30   4.8  
BT015228-1|AAT94457.1|  691|Drosophila melanogaster RE20842p pro...    30   4.8  
AE014296-916|AAF47952.3|  691|Drosophila melanogaster CG7503-PA ...    30   4.8  

>AY051790-1|AAK93214.1|  320|Drosophila melanogaster LD30634p
           protein.
          Length = 320

 Score = 73.3 bits (172), Expect = 4e-13
 Identities = 33/95 (34%), Positives = 58/95 (61%)
 Frame = +2

Query: 86  MVSVWVFLISSIIGINASGELSILHSPESLSFSGSSKTFESLLKEIFSASLGLSVEENSE 265
           M+ V+V     I  INASGE ++L+ P+++SF G+       + ++  AS+G +V  ++ 
Sbjct: 1   MLRVFVIFSLFIAAINASGEFTVLNRPKAISFKGNDALESHYVGDVLYASMGNAVSGDTN 60

Query: 266 WNGLLITDPFNTPEAVVEVYISGISSLGSSADFKS 370
           WNGL I DPFN  + V+ V++ GI  + ++ + K+
Sbjct: 61  WNGLTINDPFNLAKGVILVHVQGIGHVTTAGNVKT 95


>AE014297-894|AAF54350.1|  320|Drosophila melanogaster CG8444-PA
           protein.
          Length = 320

 Score = 73.3 bits (172), Expect = 4e-13
 Identities = 33/95 (34%), Positives = 58/95 (61%)
 Frame = +2

Query: 86  MVSVWVFLISSIIGINASGELSILHSPESLSFSGSSKTFESLLKEIFSASLGLSVEENSE 265
           M+ V+V     I  INASGE ++L+ P+++SF G+       + ++  AS+G +V  ++ 
Sbjct: 1   MLRVFVIFSLFIAAINASGEFTVLNRPKAISFKGNDALESHYVGDVLYASMGNAVSGDTN 60

Query: 266 WNGLLITDPFNTPEAVVEVYISGISSLGSSADFKS 370
           WNGL I DPFN  + V+ V++ GI  + ++ + K+
Sbjct: 61  WNGLTINDPFNLAKGVILVHVQGIGHVTTAGNVKT 95


>AE014134-2571|AAF53442.4| 1443|Drosophila melanogaster CG4168-PA
            protein.
          Length = 1443

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
 Frame = +3

Query: 447  FTNGGNKLVNINLSDSDQLLSYSNVLGDLDIPKVKKQSLQHLKSSVEEDFQFLSELAALK 626
            FTN  N L  +NL+ +      S+  GDL+  ++   +  +L S     FQ L+ L  L 
Sbjct: 891  FTNLANTLRFLNLAHNQLGSLQSHAFGDLEFLEILNVAHNNLTSLRRRSFQGLNSLQELD 950

Query: 627  AVTEKVESXAISA-DNIIDFYNLRINS 704
                +++   +    N+     LRINS
Sbjct: 951  LSHNQLDQLQVEQFSNLRKLRILRINS 977


>X68701-1|CAA48652.1|  682|Drosophila melanogaster connectin
           protein.
          Length = 682

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 18/62 (29%), Positives = 31/62 (50%)
 Frame = +3

Query: 522 LGDLDIPKVKKQSLQHLKSSVEEDFQFLSELAALKAVTEKVESXAISADNIIDFYNLRIN 701
           LG+L++ K+ + +L  +  +V  +   LSEL       E++   A+   N +   NLR N
Sbjct: 293 LGNLNVLKLTRNNLNFIGDTVFAELWSLSELELDDNRIERISERALDGLNTLKTLNLRNN 352

Query: 702 SL 707
            L
Sbjct: 353 LL 354


>M96647-1|AAA28424.1|  682|Drosophila melanogaster connectin
           protein.
          Length = 682

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 18/62 (29%), Positives = 31/62 (50%)
 Frame = +3

Query: 522 LGDLDIPKVKKQSLQHLKSSVEEDFQFLSELAALKAVTEKVESXAISADNIIDFYNLRIN 701
           LG+L++ K+ + +L  +  +V  +   LSEL       E++   A+   N +   NLR N
Sbjct: 293 LGNLNVLKLTRNNLNFIGDTVFAELWSLSELELDDNRIERISERALDGLNTLKTLNLRNN 352

Query: 702 SL 707
            L
Sbjct: 353 LL 354


>BT015228-1|AAT94457.1|  691|Drosophila melanogaster RE20842p
           protein.
          Length = 691

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 18/62 (29%), Positives = 31/62 (50%)
 Frame = +3

Query: 522 LGDLDIPKVKKQSLQHLKSSVEEDFQFLSELAALKAVTEKVESXAISADNIIDFYNLRIN 701
           LG+L++ K+ + +L  +  +V  +   LSEL       E++   A+   N +   NLR N
Sbjct: 302 LGNLNVLKLTRNNLNFIGDTVFAELWSLSELELDDNRIERISERALDGLNTLKTLNLRNN 361

Query: 702 SL 707
            L
Sbjct: 362 LL 363


>AE014296-916|AAF47952.3|  691|Drosophila melanogaster CG7503-PA
           protein.
          Length = 691

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 18/62 (29%), Positives = 31/62 (50%)
 Frame = +3

Query: 522 LGDLDIPKVKKQSLQHLKSSVEEDFQFLSELAALKAVTEKVESXAISADNIIDFYNLRIN 701
           LG+L++ K+ + +L  +  +V  +   LSEL       E++   A+   N +   NLR N
Sbjct: 302 LGNLNVLKLTRNNLNFIGDTVFAELWSLSELELDDNRIERISERALDGLNTLKTLNLRNN 361

Query: 702 SL 707
            L
Sbjct: 362 LL 363


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,238,942
Number of Sequences: 53049
Number of extensions: 629138
Number of successful extensions: 1843
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1843
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)