Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_G11
         (890 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26634-1|CAB42644.1| 3925|Homo sapiens ankyrin B (440 kDa) protein.    31   7.4  
X56957-1|CAA40278.1|  634|Homo sapiens ankyrin (brank-1) protein.      31   7.4  

>Z26634-1|CAB42644.1| 3925|Homo sapiens ankyrin B (440 kDa) protein.
          Length = 3925

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 30/111 (27%), Positives = 44/111 (39%)
 Frame = +1

Query: 547  PPERASQKSTLKSEVAKPDRTIKIPGVSPWKLPRALSCSDPAGLPDTCPPFSLREAWRFL 726
            PP   S K+  +  V+   RT K P VSP +  + L  S P+G  D   P S        
Sbjct: 1902 PPVSPSGKTDKRPPVSPSGRTEKHPPVSPGRTEKRLPVS-PSGRTDKHQPVS-------- 1952

Query: 727  IAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSXXX*TRXFATG 879
                 G + +    +PS      PP SPT+    +   +S     + F +G
Sbjct: 1953 ---TAGKTEKHLPVSPSGKTEKQPPVSPTSKTERIEETMSVRELMKAFQSG 2000


>X56957-1|CAA40278.1|  634|Homo sapiens ankyrin (brank-1) protein.
          Length = 634

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 30/111 (27%), Positives = 44/111 (39%)
 Frame = +1

Query: 547 PPERASQKSTLKSEVAKPDRTIKIPGVSPWKLPRALSCSDPAGLPDTCPPFSLREAWRFL 726
           PP   S K+  +  V+   RT K P VSP +  + L  S P+G  D   P S        
Sbjct: 426 PPVSPSGKTDKRPPVSPSGRTEKHPPVSPGRTEKRLPVS-PSGRTDKHQPVS-------- 476

Query: 727 IAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSXXX*TRXFATG 879
                G + +    +PS      PP SPT+    +   +S     + F +G
Sbjct: 477 ---TAGKTEKHLPVSPSGKTEKQPPVSPTSKTERIEETMSVRELMKAFQSG 524


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,332,078
Number of Sequences: 237096
Number of extensions: 2952250
Number of successful extensions: 8976
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8963
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)