Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_G09
(860 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 116 1e-24
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 76 1e-12
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 69 2e-10
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 66 1e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 2e-06
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 55 3e-06
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 51 4e-05
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 46 0.001
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 43 0.011
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.046
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.081
UniRef50_Q4SR66 Cluster: Chromosome 11 SCAF14528, whole genome s... 36 1.00
UniRef50_A2VES2 Cluster: IP18279p; n=2; Drosophila melanogaster|... 36 1.3
UniRef50_UPI00006D02D6 Cluster: hypothetical protein TTHERM_0094... 34 5.3
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 5.3
UniRef50_A0PLK5 Cluster: Transcriptional regulatory protein; n=3... 34 5.3
UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer ariet... 33 7.0
UniRef50_UPI0000E1F625 Cluster: PREDICTED: hypothetical protein;... 33 9.3
UniRef50_Q92KQ8 Cluster: Putative uncharacterized protein; n=1; ... 33 9.3
UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4; ... 33 9.3
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 116 bits (278), Expect = 1e-24
Identities = 51/58 (87%), Positives = 51/58 (87%)
Frame = +1
Query: 682 FPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRXRSXAPSWGCVHXPP 855
FPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVR RS APSW PP
Sbjct: 48 FPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPP 105
Score = 85.8 bits (203), Expect = 1e-15
Identities = 53/98 (54%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Frame = +2
Query: 572 RXCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRSPWKLPRALSCSDPAAYRIPVRL 751
R C RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRR P + P P R+P
Sbjct: 12 RRC-RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPC--RLPDTC 68
Query: 752 SPFGKRGAFS*LTL*VSQFGV--GRXXQAGAVCTNPXF 859
PF R A+ L V + AVCTNP F
Sbjct: 69 PPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPF 106
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 76.2 bits (179), Expect = 1e-12
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +3
Query: 702 VRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSS 809
+RSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSS
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSS 36
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 68.9 bits (161), Expect = 2e-10
Identities = 32/39 (82%), Positives = 33/39 (84%)
Frame = +2
Query: 584 RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRSPWKLP 700
RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRR P P
Sbjct: 51 RFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAP 89
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 66.1 bits (154), Expect = 1e-09
Identities = 35/65 (53%), Positives = 41/65 (63%)
Frame = +2
Query: 584 RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRSPWKLPRALSCSDPAAYRIPVRLSPFG 763
RFSIGSAPLTSI K DAQ+ GGETRQDYKD RR P P P + +PV +G
Sbjct: 83 RFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLP--FGLPVSFRCYG 140
Query: 764 KRGAF 778
+ +F
Sbjct: 141 RGFSF 145
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +3
Query: 375 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 473
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.6 bits (128), Expect = 2e-06
Identities = 31/54 (57%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +3
Query: 351 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQG 509
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 54.8 bits (126), Expect = 3e-06
Identities = 30/68 (44%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = -3
Query: 837 APAWXXRPTPN*DTYSVSYEKAPRFPKGERRTGIR*AAGSEQESARGSFQGERL-VSL*S 661
+PAW RP P+ DT SVSYEKAPRFPKG++ + A GE+ SL
Sbjct: 32 SPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSGKRQGRNRRAHEGAAGEKSPASLSP 91
Query: 660 CRVSPPLT 637
PPLT
Sbjct: 92 VGFRPPLT 99
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 50.8 bits (116), Expect = 4e-05
Identities = 26/40 (65%), Positives = 29/40 (72%), Gaps = 3/40 (7%)
Frame = -1
Query: 548 LLAFCSHVLSC---VIPLILWITVLPPLSELIPLAAAERP 438
LL +L+C + PLILWITVLPPLSEL PLAA ERP
Sbjct: 17 LLPVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
Score = 35.9 bits (79), Expect = 1.3
Identities = 21/37 (56%), Positives = 22/37 (59%)
Frame = -3
Query: 618 MLVRGAEPMEKRQQXRPFYGSWPFAGLLLTCSFLRYP 508
MLVRGAEPMEKR + P LLTCSF YP
Sbjct: 1 MLVRGAEPMEKRLRC----WLLPVLCFLLTCSFRLYP 33
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 46.0 bits (104), Expect = 0.001
Identities = 26/46 (56%), Positives = 28/46 (60%)
Frame = +2
Query: 638 VRGGETRQDYKDTRRSPWKLPRALSCSDPAAYRIPVRLSPFGKRGA 775
VR GETRQD K S LP ALSCS+PA RIPV PF G+
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPV--PPFSLAGS 66
Score = 33.9 bits (74), Expect = 5.3
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +1
Query: 745 PPFSLREAWRFLIAHAVGISVRXRSXAPSWGCVHXPP 855
PPFSL + + GIS R RS APSW PP
Sbjct: 59 PPFSLAGSVALSHSSHSGISARCRSFAPSWAVSKNPP 95
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 42.7 bits (96), Expect = 0.011
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +1
Query: 154 DPDMIRYIDEFGQTTTXMQ 210
DPDMIRYIDEFGQTTT MQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.046
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 349 SALMNRPTRGERRFAYW 399
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.081
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -2
Query: 421 ERGSGRAPNTQTASPRALADSLMQ 350
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_Q4SR66 Cluster: Chromosome 11 SCAF14528, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 11 SCAF14528, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 743
Score = 36.3 bits (80), Expect = 1.00
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Frame = +1
Query: 478 GGNTVIHRIRGITQ-----ERTCEQKASKRPGTVKRPRLLAFFHRLRPPDEHHKNRRSS- 639
G NT++H +R T+ R+C+ A K ++ RPR L F L P D + RRS
Sbjct: 646 GENTILHSLRANTRWFHTAARSCDSSADKT--SLSRPRALFIFSSLTPKDALLRRRRSER 703
Query: 640 -QRWRNPT 660
Q R+P+
Sbjct: 704 LQHSRDPS 711
>UniRef50_A2VES2 Cluster: IP18279p; n=2; Drosophila
melanogaster|Rep: IP18279p - Drosophila melanogaster
(Fruit fly)
Length = 74
Score = 35.9 bits (79), Expect = 1.3
Identities = 15/52 (28%), Positives = 30/52 (57%)
Frame = +3
Query: 612 RASQKSTLKSEVAKPDRTIKIPGVPPGSSLVRSPVPTLPLTGYLSAFLPSGS 767
R S++ T+ +++ +P VPP + RS +P P++G +++ P+GS
Sbjct: 8 RISKEYTIMGCCFGKSKSVDLPAVPPAPAKQRSTLPEFPISGSVTSTAPAGS 59
>UniRef50_UPI00006D02D6 Cluster: hypothetical protein
TTHERM_00947600; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00947600 - Tetrahymena
thermophila SB210
Length = 534
Score = 33.9 bits (74), Expect = 5.3
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +1
Query: 511 ITQERTCEQKASKRPGTVKRPRLLAFFHRLRPPDEHHKNRRSSQRWRNPTG 663
I E + + S R K P+L F + L PPDE +K++ Q R P G
Sbjct: 112 INNENIQQNRESIRLSRKKIPQLQPFIYGLDPPDEKNKHKEFRQAQRLPNG 162
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 5.3
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 232 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 399
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
>UniRef50_A0PLK5 Cluster: Transcriptional regulatory protein; n=3;
Actinomycetales|Rep: Transcriptional regulatory protein
- Mycobacterium ulcerans (strain Agy99)
Length = 264
Score = 33.9 bits (74), Expect = 5.3
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -2
Query: 733 VSGRVGTGERTR--ELPGGTPGIFIVLSGFATSDLSVDFCDARQGGGAY 593
V R+ T E R +LP G P + +V + + T D++V+ CD + AY
Sbjct: 207 VGARMPTPEERRALQLPPGAPVLTVVRTAYDTKDVAVEVCDTVKVASAY 255
>UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer
arietinum|Rep: Reverse transcriptase - Cicer arietinum
(Chickpea) (Garbanzo)
Length = 37
Score = 33.5 bits (73), Expect = 7.0
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 484 NTVIHRIRGITQERTCE 534
NTVIH +GITQERTCE
Sbjct: 21 NTVIHXNQGITQERTCE 37
>UniRef50_UPI0000E1F625 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 567
Score = 33.1 bits (72), Expect = 9.3
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +1
Query: 535 QKASKRPGTVKRPRLLAFFHRLRPPDEHHKNRRSSQRW 648
Q AS PGT R A F PPD HH++ R + W
Sbjct: 153 QSASSGPGTKPRGVRPAPFADRGPPDRHHESSRGDKAW 190
>UniRef50_Q92KQ8 Cluster: Putative uncharacterized protein; n=1;
Sinorhizobium meliloti|Rep: Putative uncharacterized
protein - Rhizobium meliloti (Sinorhizobium meliloti)
Length = 1610
Score = 33.1 bits (72), Expect = 9.3
Identities = 22/57 (38%), Positives = 28/57 (49%)
Frame = +3
Query: 621 QKSTLKSEVAKPDRTIKIPGVPPGSSLVRSPVPTLPLTGYLSAFLPSGSVALSHSSR 791
Q S S V D +PG+PPGS ++ PTLP T L + + ALS SR
Sbjct: 748 QFSNGASVVTDIDGKYSLPGLPPGSHVIAVSTPTLPATVKLRS--TTARDALSPQSR 802
>UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 668)
Length = 755
Score = 33.1 bits (72), Expect = 9.3
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = -1
Query: 782 MRKRHASRREKGGQVSGKRQGRNRRAHE 699
+R+R A RR GG+ G+R+GRNR+ +
Sbjct: 355 VRRRAAPRRRHGGEWRGRRRGRNRKRRQ 382
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 749,157,797
Number of Sequences: 1657284
Number of extensions: 14686430
Number of successful extensions: 43482
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 41388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43459
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76243001646
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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