Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_G09
         (860 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0156 - 1233431-1233925                                           29   6.3  
03_02_1023 + 13265179-13265330,13265526-13265637,13265752-132660...    29   6.3  
10_08_0965 + 21915842-21916906                                         28   8.3  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.3  
03_06_0149 - 31987183-31987630,31987813-31987874                       28   8.3  

>08_01_0156 - 1233431-1233925
          Length = 164

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
 Frame = -1

Query: 842 TQPQLGAXDLXRTEIPTA*AMRKRHASRREK--GGQVSGKRQGRNRRAHEGASRGNA 678
           T   LG  D   TE+  A A     A+R E+  GG   G R G   RA +   +G A
Sbjct: 85  TATALGDADATATEVDAAAAAEAEAAARGERGDGGGDGGGRAGGRGRARDEREKGAA 141


>03_02_1023 +
           13265179-13265330,13265526-13265637,13265752-13266048,
           13266361-13266623,13267637-13267847,13268420-13268590,
           13268671-13268748,13269275-13269520,13269763-13271868,
           13272122-13273904,13274113-13274216,13274752-13275108,
           13275210-13275328,13276175-13276436,13276669-13276893,
           13277075-13277214,13278087-13278159,13278431-13278532,
           13278647-13279018,13279183-13279230,13279516-13279900,
           13280440-13280558
          Length = 2574

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 14/53 (26%), Positives = 26/53 (49%)
 Frame = +2

Query: 521 KEHVSKRPAKGQEP*KGRXCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTR 679
           ++  S  PAKG+   KG+  WR     A L S++ ++ + +  +     KD +
Sbjct: 147 RKSTSTSPAKGKGKPKGQGKWRLITNIASLLSLSIVELRFKAPKAALGIKDLK 199


>10_08_0965 + 21915842-21916906
          Length = 354

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +3

Query: 630 TLKSEVAKPDRTIKIPGVPPGSSLVRS-PVPTLPLTGYL 743
           ++ S  + P+    +   PP  + VR+ P+PTLP + YL
Sbjct: 191 SVSSRRSNPNSAAAVASAPPEGAAVRAYPLPTLPNSEYL 229


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 357 NESAN---ARGEAVCVLGALPLPRSLTRCAR 440
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>03_06_0149 - 31987183-31987630,31987813-31987874
          Length = 169

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 785 AMRKRHASRREKGGQVSGKRQGRNRRAHEGASRG 684
           A+ + H   R +   +  +R+GR R AHEG   G
Sbjct: 76  AVARGHGLERLQEAGIEAERRGRRRNAHEGIKIG 109


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,051,347
Number of Sequences: 37544
Number of extensions: 442152
Number of successful extensions: 1434
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1432
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)