Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_G09
         (860 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030241-1|ABN49380.1|   74|Drosophila melanogaster IP18279p pro...    36   0.072
AE014297-4641|AAN14249.1|  659|Drosophila melanogaster CG31019-P...    30   3.6  
U31961-5|AAA84404.1|  424|Drosophila melanogaster protein ( Dros...    29   8.2  
AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-P...    29   8.2  
AE014296-778|AAX52730.2|  660|Drosophila melanogaster CG33545-PA...    29   8.2  

>BT030241-1|ABN49380.1|   74|Drosophila melanogaster IP18279p
           protein.
          Length = 74

 Score = 35.9 bits (79), Expect = 0.072
 Identities = 15/52 (28%), Positives = 30/52 (57%)
 Frame = +3

Query: 612 RASQKSTLKSEVAKPDRTIKIPGVPPGSSLVRSPVPTLPLTGYLSAFLPSGS 767
           R S++ T+        +++ +P VPP  +  RS +P  P++G +++  P+GS
Sbjct: 8   RISKEYTIMGCCFGKSKSVDLPAVPPAPAKQRSTLPEFPISGSVTSTAPAGS 59


>AE014297-4641|AAN14249.1|  659|Drosophila melanogaster CG31019-PA
           protein.
          Length = 659

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -1

Query: 743 QVSGKRQGRNRRAHEGASRGNAWYLYSP 660
           +V  KR+GRNR AH   SR    Y   P
Sbjct: 491 EVRSKRRGRNRHAHHSRSRSKTRYEVKP 518


>U31961-5|AAA84404.1|  424|Drosophila melanogaster protein (
           Drosophila melanogasterbithorax complex (BX-C), complete
           sequence. ).
          Length = 424

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 360 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 455
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 340 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 371


>AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-PA
           protein.
          Length = 417

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 360 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 455
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 333 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 364


>AE014296-778|AAX52730.2|  660|Drosophila melanogaster CG33545-PA
           protein.
          Length = 660

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +3

Query: 684 PPGSSLVRSPVPTLPLTGYLSAFLPSGSVALSHSSRC 794
           P GSS + SPVP  PL    SA +P+ +V L+    C
Sbjct: 263 PSGSSFMPSPVPPAPLPA--SASVPAPTVPLATQISC 297


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,971,173
Number of Sequences: 53049
Number of extensions: 698228
Number of successful extensions: 1750
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1748
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4147514904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)